EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000029958 (Gene tree)
Gene ID: 105713397
Gene Symbol: -
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 70026 bases
Position: chrKZ198225.1:961444-1031469
Accession: 105713397
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000025641	ResIII	PF04851.15	1.1e-07	1	1
ENSANAP00000025650	ResIII	PF04851.15	1.1e-07	1	1
ENSANAP00000025630	ResIII	PF04851.15	1.1e-07	1	1
ENSANAP00000025603	ResIII	PF04851.15	1.1e-07	1	1
ENSANAP00000025582	ResIII	PF04851.15	1.2e-07	1	1
ENSANAP00000025654	ResIII	PF04851.15	2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000043553	-	4209	-	ENSANAP00000025630	1402 (aa)	-	A0A2K5DXD6
ENSANAT00000043505	-	4326	XM_021669958	ENSANAP00000025582	1441 (aa)	XP_021525633	A0A2K5DXE9
ENSANAT00000043526	-	4317	XM_021669957	ENSANAP00000025603	1393 (aa)	XP_021525632	A0A2K5DXJ9
ENSANAT00000043564	-	4074	XM_021669960	ENSANAP00000025641	1357 (aa)	XP_021525635	A0A2K5DXC0
ENSANAT00000043577	-	3720	-	ENSANAP00000025654	1239 (aa)	-	A0A2K5DXC4
ENSANAT00000043573	-	3837	-	ENSANAP00000025650	1278 (aa)	-	A0A2K5DXF7

Gene Model

Click here to download ENSANAG00000029958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000029958's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000029958	-	71	68.481	ENSANAG00000026685	SBNO2	73	68.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000029958	-	100	98.780	ENSG00000139697	SBNO1	100	98.780	Homo_sapiens
ENSANAG00000029958	-	83	83.333	ENSAPOG00000003196	sbno1	98	81.169	Acanthochromis_polyacanthus
ENSANAG00000029958	-	99	98.915	ENSAMEG00000015151	SBNO1	100	97.636	Ailuropoda_melanoleuca
ENSANAG00000029958	-	99	76.118	ENSACIG00000008088	sbno1	94	82.353	Amphilophus_citrinellus
ENSANAG00000029958	-	99	75.000	ENSAOCG00000014859	sbno1	94	83.122	Amphiprion_ocellaris
ENSANAG00000029958	-	99	75.000	ENSAPEG00000006069	sbno1	94	83.122	Amphiprion_percula
ENSANAG00000029958	-	99	83.871	ENSATEG00000006667	sbno1	95	84.420	Anabas_testudineus
ENSANAG00000029958	-	99	94.937	ENSAPLG00000015674	SBNO1	100	91.750	Anas_platyrhynchos
ENSANAG00000029958	-	99	93.440	ENSACAG00000015441	SBNO1	84	94.746	Anolis_carolinensis
ENSANAG00000029958	-	99	75.974	ENSACLG00000024913	sbno1	99	76.135	Astatotilapia_calliptera
ENSANAG00000029958	-	99	86.667	ENSAMXG00000019473	sbno1	94	86.751	Astyanax_mexicanus
ENSANAG00000029958	-	99	98.188	ENSBTAG00000020505	SBNO1	99	97.845	Bos_taurus
ENSANAG00000029958	-	100	99.426	ENSCJAG00000016599	SBNO1	100	99.426	Callithrix_jacchus
ENSANAG00000029958	-	100	97.921	ENSCAFG00000007503	SBNO1	100	97.921	Canis_familiaris
ENSANAG00000029958	-	100	97.200	ENSCAFG00020015363	SBNO1	100	97.200	Canis_lupus_dingo
ENSANAG00000029958	-	99	98.188	ENSCHIG00000008382	SBNO1	99	98.188	Capra_hircus
ENSANAG00000029958	-	100	98.305	ENSTSYG00000012749	SBNO1	100	98.305	Carlito_syrichta
ENSANAG00000029958	-	96	98.734	ENSCAPG00000000384	SBNO1	99	98.734	Cavia_aperea
ENSANAG00000029958	-	99	98.734	ENSCPOG00000008109	SBNO1	100	97.865	Cavia_porcellus
ENSANAG00000029958	-	100	95.194	ENSCCAG00000035316	SBNO1	100	95.194	Cebus_capucinus
ENSANAG00000029958	-	99	99.458	ENSCATG00000008239	SBNO1	99	99.458	Cercocebus_atys
ENSANAG00000029958	-	99	98.734	ENSCLAG00000008995	SBNO1	100	97.865	Chinchilla_lanigera
ENSANAG00000029958	-	85	99.223	ENSCSAG00000002064	SBNO1	100	99.223	Chlorocebus_sabaeus
ENSANAG00000029958	-	95	98.565	ENSCHOG00000008814	SBNO1	91	99.500	Choloepus_hoffmanni
ENSANAG00000029958	-	99	93.972	ENSCPBG00000025968	SBNO1	99	92.047	Chrysemys_picta_bellii
ENSANAG00000029958	-	100	93.333	ENSCANG00000042688	-	100	93.333	Colobus_angolensis_palliatus
ENSANAG00000029958	-	100	96.841	ENSCGRG00001017470	Sbno1	100	96.841	Cricetulus_griseus_chok1gshd
ENSANAG00000029958	-	100	96.841	ENSCGRG00000004756	Sbno1	100	96.841	Cricetulus_griseus_crigri
ENSANAG00000029958	-	99	82.554	ENSCSEG00000011919	sbno1	95	83.122	Cynoglossus_semilaevis
ENSANAG00000029958	-	99	83.154	ENSCVAG00000007038	sbno1	95	83.666	Cyprinodon_variegatus
ENSANAG00000029958	-	99	86.570	ENSDARG00000099080	sbno1	94	86.679	Danio_rerio
ENSANAG00000029958	-	100	96.633	ENSDNOG00000017147	SBNO1	98	97.431	Dasypus_novemcinctus
ENSANAG00000029958	-	100	84.079	ENSDORG00000015261	Sbno1	100	84.362	Dipodomys_ordii
ENSANAG00000029958	-	91	100.000	ENSETEG00000005620	SBNO1	93	89.662	Echinops_telfairi
ENSANAG00000029958	-	72	82.243	ENSEBUG00000013823	sbno1	85	86.802	Eptatretus_burgeri
ENSANAG00000029958	-	57	93.371	ENSEASG00005012595	-	92	98.071	Equus_asinus_asinus
ENSANAG00000029958	-	100	98.134	ENSECAG00000006127	SBNO1	100	98.134	Equus_caballus
ENSANAG00000029958	-	83	97.802	ENSEEUG00000003793	SBNO1	83	97.802	Erinaceus_europaeus
ENSANAG00000029958	-	99	86.486	ENSELUG00000002886	sbno1	94	86.933	Esox_lucius
ENSANAG00000029958	-	99	98.913	ENSFCAG00000015331	SBNO1	99	98.204	Felis_catus
ENSANAG00000029958	-	99	95.118	ENSFALG00000009273	SBNO1	100	91.966	Ficedula_albicollis
ENSANAG00000029958	-	99	95.771	ENSFDAG00000014232	SBNO1	99	95.771	Fukomys_damarensis
ENSANAG00000029958	-	99	83.333	ENSFHEG00000007360	sbno1	95	83.848	Fundulus_heteroclitus
ENSANAG00000029958	-	96	82.447	ENSGMOG00000018229	sbno1	94	84.587	Gadus_morhua
ENSANAG00000029958	-	98	90.812	ENSGALG00000003392	SBNO1	99	91.883	Gallus_gallus
ENSANAG00000029958	-	99	83.513	ENSGAFG00000003960	sbno1	95	84.029	Gambusia_affinis
ENSANAG00000029958	-	96	83.848	ENSGACG00000015633	sbno1	94	84.249	Gasterosteus_aculeatus
ENSANAG00000029958	-	100	94.200	ENSGAGG00000001065	SBNO1	100	95.118	Gopherus_agassizii
ENSANAG00000029958	-	100	98.674	ENSGGOG00000015000	SBNO1	100	98.674	Gorilla_gorilla
ENSANAG00000029958	-	99	70.381	ENSHBUG00000011910	sbno1	99	70.545	Haplochromis_burtoni
ENSANAG00000029958	-	99	98.734	ENSHGLG00000014165	-	99	98.734	Heterocephalus_glaber_female
ENSANAG00000029958	-	91	86.649	ENSHCOG00000003246	sbno1	95	84.585	Hippocampus_comes
ENSANAG00000029958	-	99	85.921	ENSIPUG00000015830	Sbno1	92	88.889	Ictalurus_punctatus
ENSANAG00000029958	-	100	98.084	ENSSTOG00000023221	SBNO1	100	98.084	Ictidomys_tridecemlineatus
ENSANAG00000029958	-	100	97.416	ENSJJAG00000001741	Sbno1	100	97.416	Jaculus_jaculus
ENSANAG00000029958	-	99	76.676	ENSKMAG00000009696	sbno1	95	84.124	Kryptolebias_marmoratus
ENSANAG00000029958	-	99	85.072	ENSLBEG00000007623	sbno1	95	85.481	Labrus_bergylta
ENSANAG00000029958	-	98	83.687	ENSLACG00000017227	SBNO1	93	91.557	Latimeria_chalumnae
ENSANAG00000029958	-	99	88.288	ENSLOCG00000005725	sbno1	92	88.748	Lepisosteus_oculatus
ENSANAG00000029958	-	99	98.373	ENSLAFG00000002135	SBNO1	100	96.913	Loxodonta_africana
ENSANAG00000029958	-	100	98.636	ENSMFAG00000031429	SBNO1	100	98.636	Macaca_fascicularis
ENSANAG00000029958	-	100	98.636	ENSMMUG00000011496	SBNO1	100	98.636	Macaca_mulatta
ENSANAG00000029958	-	100	96.913	ENSMLEG00000033260	SBNO1	99	99.458	Mandrillus_leucophaeus
ENSANAG00000029958	-	99	75.617	ENSMAMG00000005473	sbno1	95	84.755	Mastacembelus_armatus
ENSANAG00000029958	-	99	95.298	ENSMGAG00000003274	SBNO1	100	91.894	Meleagris_gallopavo
ENSANAG00000029958	-	52	97.277	ENSMAUG00000004834	-	100	96.833	Mesocricetus_auratus
ENSANAG00000029958	-	100	97.105	ENSMICG00000006573	-	100	97.105	Microcebus_murinus
ENSANAG00000029958	-	100	96.792	ENSMOCG00000009390	Sbno1	99	98.192	Microtus_ochrogaster
ENSANAG00000029958	-	99	73.536	ENSMMOG00000008691	sbno1	93	84.392	Mola_mola
ENSANAG00000029958	-	99	94.540	ENSMODG00000012470	SBNO1	99	94.278	Monodelphis_domestica
ENSANAG00000029958	-	99	82.374	ENSMALG00000001056	sbno1	99	75.315	Monopterus_albus
ENSANAG00000029958	-	99	98.913	MGP_CAROLIEiJ_G0027749	Sbno1	100	97.134	Mus_caroli
ENSANAG00000029958	-	99	98.913	ENSMUSG00000038095	Sbno1	100	97.134	Mus_musculus
ENSANAG00000029958	-	99	97.198	MGP_PahariEiJ_G0024329	Sbno1	100	96.833	Mus_pahari
ENSANAG00000029958	-	99	98.913	MGP_SPRETEiJ_G0028747	Sbno1	100	97.134	Mus_spretus
ENSANAG00000029958	-	100	98.062	ENSMPUG00000001658	SBNO1	100	98.062	Mustela_putorius_furo
ENSANAG00000029958	-	100	97.487	ENSMLUG00000017159	SBNO1	100	97.487	Myotis_lucifugus
ENSANAG00000029958	-	99	99.277	ENSNGAG00000012620	Sbno1	100	97.846	Nannospalax_galili
ENSANAG00000029958	-	99	76.211	ENSNBRG00000019189	sbno1	99	76.372	Neolamprologus_brichardi
ENSANAG00000029958	-	100	94.842	ENSNLEG00000001502	SBNO1	100	94.842	Nomascus_leucogenys
ENSANAG00000029958	-	60	96.774	ENSMEUG00000008768	-	93	90.506	Notamacropus_eugenii
ENSANAG00000029958	-	99	96.931	ENSOPRG00000011054	SBNO1	100	94.122	Ochotona_princeps
ENSANAG00000029958	-	99	98.734	ENSODEG00000009997	SBNO1	100	97.865	Octodon_degus
ENSANAG00000029958	-	99	75.510	ENSONIG00000015348	sbno1	95	83.577	Oreochromis_niloticus
ENSANAG00000029958	-	98	96.144	ENSOCUG00000002441	SBNO1	95	95.988	Oryctolagus_cuniculus
ENSANAG00000029958	-	96	82.941	ENSORLG00000001593	sbno1	95	82.577	Oryzias_latipes
ENSANAG00000029958	-	99	82.194	ENSORLG00020015216	sbno1	95	82.577	Oryzias_latipes_hni
ENSANAG00000029958	-	99	82.374	ENSORLG00015002726	sbno1	95	82.759	Oryzias_latipes_hsok
ENSANAG00000029958	-	99	80.986	ENSOMEG00000019313	sbno1	94	82.878	Oryzias_melastigma
ENSANAG00000029958	-	52	94.402	ENSOGAG00000010781	-	100	94.277	Otolemur_garnettii
ENSANAG00000029958	-	99	98.188	ENSOARG00000004404	SBNO1	99	97.418	Ovis_aries
ENSANAG00000029958	-	100	98.636	ENSPPAG00000024635	SBNO1	100	98.636	Pan_paniscus
ENSANAG00000029958	-	99	98.913	ENSPPRG00000022092	SBNO1	99	98.204	Panthera_pardus
ENSANAG00000029958	-	100	97.918	ENSPTIG00000017803	SBNO1	100	97.918	Panthera_tigris_altaica
ENSANAG00000029958	-	100	98.708	ENSPTRG00000005597	SBNO1	100	98.708	Pan_troglodytes
ENSANAG00000029958	-	100	98.674	ENSPANG00000011640	SBNO1	100	98.674	Papio_anubis
ENSANAG00000029958	-	99	85.435	ENSPKIG00000001441	sbno1	94	86.545	Paramormyrops_kingsleyae
ENSANAG00000029958	-	100	93.110	ENSPSIG00000009572	-	100	91.679	Pelodiscus_sinensis
ENSANAG00000029958	-	98	88.072	ENSPSIG00000009256	-	100	87.646	Pelodiscus_sinensis
ENSANAG00000029958	-	99	97.830	ENSPEMG00000016087	Sbno1	99	97.830	Peromyscus_maniculatus_bairdii
ENSANAG00000029958	-	99	93.826	ENSPCIG00000010985	SBNO1	99	94.183	Phascolarctos_cinereus
ENSANAG00000029958	-	99	83.513	ENSPFOG00000005069	sbno1	95	84.029	Poecilia_formosa
ENSANAG00000029958	-	99	83.513	ENSPLAG00000015015	sbno1	95	84.029	Poecilia_latipinna
ENSANAG00000029958	-	99	83.513	ENSPMEG00000021212	sbno1	95	84.029	Poecilia_mexicana
ENSANAG00000029958	-	99	83.154	ENSPREG00000017746	sbno1	95	83.666	Poecilia_reticulata
ENSANAG00000029958	-	100	98.349	ENSPPYG00000005084	SBNO1	100	98.349	Pongo_abelii
ENSANAG00000029958	-	89	91.781	ENSPCAG00000008634	SBNO1	88	91.747	Procavia_capensis
ENSANAG00000029958	-	100	97.863	ENSPCOG00000024277	SBNO1	100	97.863	Propithecus_coquereli
ENSANAG00000029958	-	92	98.413	ENSPVAG00000015304	SBNO1	87	98.413	Pteropus_vampyrus
ENSANAG00000029958	-	99	75.828	ENSPNYG00000004291	sbno1	95	83.577	Pundamilia_nyererei
ENSANAG00000029958	-	99	87.545	ENSPNAG00000015622	sbno1	95	87.659	Pygocentrus_nattereri
ENSANAG00000029958	-	99	98.913	ENSRNOG00000001064	Sbno1	99	98.913	Rattus_norvegicus
ENSANAG00000029958	-	100	98.780	ENSRROG00000034230	SBNO1	100	98.780	Rhinopithecus_roxellana
ENSANAG00000029958	-	97	93.651	ENSSBOG00000015422	SBNO1	100	94.122	Saimiri_boliviensis_boliviensis
ENSANAG00000029958	-	99	85.409	ENSSFOG00015019025	sbno1	94	86.364	Scleropages_formosus
ENSANAG00000029958	-	99	82.914	ENSSMAG00000013640	sbno1	95	83.485	Scophthalmus_maximus
ENSANAG00000029958	-	99	84.268	ENSSDUG00000023480	sbno1	95	84.574	Seriola_dumerili
ENSANAG00000029958	-	99	84.268	ENSSLDG00000007928	sbno1	95	84.574	Seriola_lalandi_dorsalis
ENSANAG00000029958	-	90	98.399	ENSSARG00000002594	SBNO1	89	97.896	Sorex_araneus
ENSANAG00000029958	-	99	93.682	ENSSPUG00000012640	SBNO1	100	91.163	Sphenodon_punctatus
ENSANAG00000029958	-	99	82.914	ENSSPAG00000016244	sbno1	95	83.303	Stegastes_partitus
ENSANAG00000029958	-	99	98.915	ENSSSCG00000009776	SBNO1	100	97.865	Sus_scrofa
ENSANAG00000029958	-	99	95.298	ENSTGUG00000005380	SBNO1	100	91.894	Taeniopygia_guttata
ENSANAG00000029958	-	99	83.725	ENSTRUG00000018490	sbno1	95	84.307	Takifugu_rubripes
ENSANAG00000029958	-	63	70.777	ENSTNIG00000013506	sbno1	99	71.375	Tetraodon_nigroviridis
ENSANAG00000029958	-	100	98.062	ENSUAMG00000019671	SBNO1	100	98.062	Ursus_americanus
ENSANAG00000029958	-	100	98.062	ENSUMAG00000004002	SBNO1	100	98.062	Ursus_maritimus
ENSANAG00000029958	-	98	91.550	ENSVPAG00000007024	SBNO1	95	93.478	Vicugna_pacos
ENSANAG00000029958	-	100	98.062	ENSVVUG00000027807	SBNO1	100	98.062	Vulpes_vulpes
ENSANAG00000029958	-	99	91.950	ENSXETG00000031930	SBNO1	94	92.727	Xenopus_tropicalis
ENSANAG00000029958	-	98	74.899	ENSXCOG00000011607	sbno1	90	85.263	Xiphophorus_couchianus
ENSANAG00000029958	-	99	83.154	ENSXMAG00000002140	sbno1	95	83.666	Xiphophorus_maculatus