EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000030088 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DNA dC->dU-editing enzyme APOBEC-3C-like
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 29909 bases
Position: chrKZ207552.1:2177127-2207035
Accession: 105721802
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000024760	APOBEC_N	PF08210.11	3.2e-102	1	2
ENSANAP00000024760	APOBEC_N	PF08210.11	3.2e-102	2	2
ENSANAP00000024763	APOBEC_N	PF08210.11	3.2e-102	1	2
ENSANAP00000024763	APOBEC_N	PF08210.11	3.2e-102	2	2
ENSANAP00000024749	APOBEC_N	PF08210.11	1.5e-56	1	1
ENSANAP00000024756	APOBEC_N	PF08210.11	1.9e-56	1	1
ENSANAP00000024760	APOBEC_C	PF05240.14	2.7e-62	1	2
ENSANAP00000024760	APOBEC_C	PF05240.14	2.7e-62	2	2
ENSANAP00000024763	APOBEC_C	PF05240.14	2.7e-62	1	2
ENSANAP00000024763	APOBEC_C	PF05240.14	2.7e-62	2	2
ENSANAP00000024749	APOBEC_C	PF05240.14	1.2e-31	1	1
ENSANAP00000024756	APOBEC_C	PF05240.14	1.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000042675	-	1582	-	ENSANAP00000024756	202 (aa)	-	A0A2K5DUY2
ENSANAT00000042679	-	2045	XM_021668768	ENSANAP00000024760	386 (aa)	XP_021524443	A0A2K5DUW7
ENSANAT00000042682	-	2641	-	ENSANAP00000024763	386 (aa)	-	A0A2K5DUW7
ENSANAT00000042669	-	1582	-	ENSANAP00000024749	202 (aa)	-	A0A2K5DUX8

Gene Model

Click here to download ENSANAG00000030088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000030088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000030088	-	98	43.411	ENSANAG00000031271	APOBEC3G	100	43.411
ENSANAG00000030088	-	95	39.487	ENSANAG00000020573	-	97	37.949
ENSANAG00000030088	-	91	43.103	ENSANAG00000022438	AICDA	88	43.103
ENSANAG00000030088	-	100	39.323	ENSANAG00000028416	-	99	39.323
ENSANAG00000030088	-	92	42.105	ENSANAG00000027961	-	99	42.105
ENSANAG00000030088	-	91	33.333	ENSANAG00000025410	APOBEC3H	84	33.333
ENSANAG00000030088	-	93	33.846	ENSANAG00000026993	APOBEC2	88	32.663

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000030088	-	98	74.054	ENSG00000128394	APOBEC3F	99	74.054	Homo_sapiens
ENSANAG00000030088	-	97	68.280	ENSG00000244509	APOBEC3C	100	68.947	Homo_sapiens
ENSANAG00000030088	-	99	67.358	ENSG00000243811	APOBEC3D	100	68.947	Homo_sapiens
ENSANAG00000030088	-	68	90.152	ENSCJAG00000015317	-	100	90.152	Callithrix_jacchus
ENSANAG00000030088	-	93	47.895	ENSCAFG00020002615	-	99	48.649	Canis_lupus_dingo
ENSANAG00000030088	-	97	53.571	ENSTSYG00000034260	-	99	54.497	Carlito_syrichta
ENSANAG00000030088	-	94	54.098	ENSTSYG00000028254	-	99	54.098	Carlito_syrichta
ENSANAG00000030088	-	95	50.000	ENSTSYG00000030036	-	99	50.000	Carlito_syrichta
ENSANAG00000030088	-	96	84.615	ENSCCAG00000030932	-	84	87.097	Cebus_capucinus
ENSANAG00000030088	-	98	71.429	ENSCATG00000033502	-	99	69.730	Cercocebus_atys
ENSANAG00000030088	-	97	67.027	ENSCATG00000043226	APOBEC3C	100	67.368	Cercocebus_atys
ENSANAG00000030088	-	99	72.386	ENSCSAG00000006382	APOBEC3F	99	72.386	Chlorocebus_sabaeus
ENSANAG00000030088	-	97	67.204	ENSCSAG00000006402	APOBEC3C	100	67.895	Chlorocebus_sabaeus
ENSANAG00000030088	-	97	66.129	ENSCANG00000039177	APOBEC3C	100	66.842	Colobus_angolensis_palliatus
ENSANAG00000030088	-	98	65.054	ENSCANG00000033269	-	99	67.956	Colobus_angolensis_palliatus
ENSANAG00000030088	-	99	70.053	ENSCANG00000031957	-	100	70.190	Colobus_angolensis_palliatus
ENSANAG00000030088	-	98	70.430	ENSCANG00000032904	-	100	70.430	Colobus_angolensis_palliatus
ENSANAG00000030088	-	91	40.860	ENSDNOG00000044642	-	99	40.860	Dasypus_novemcinctus
ENSANAG00000030088	-	97	46.667	ENSEASG00005018641	-	100	46.667	Equus_asinus_asinus
ENSANAG00000030088	-	98	48.087	ENSECAG00000006071	-	99	48.619	Equus_caballus
ENSANAG00000030088	-	97	69.189	ENSGGOG00000036587	-	100	69.474	Gorilla_gorilla
ENSANAG00000030088	-	98	71.892	ENSGGOG00000038678	APOBEC3F	99	71.892	Gorilla_gorilla
ENSANAG00000030088	-	97	45.078	ENSHGLG00000017315	-	92	45.078	Heterocephalus_glaber_female
ENSANAG00000030088	-	96	45.078	ENSHGLG00100003105	-	95	45.078	Heterocephalus_glaber_male
ENSANAG00000030088	-	98	69.730	ENSMFAG00000004037	APOBEC3F	99	69.730	Macaca_fascicularis
ENSANAG00000030088	-	99	71.658	ENSMFAG00000002331	-	100	71.658	Macaca_fascicularis
ENSANAG00000030088	-	97	65.054	ENSMFAG00000016792	APOBEC3C	100	65.789	Macaca_fascicularis
ENSANAG00000030088	-	96	64.865	ENSMMUG00000004018	APOBEC3C	95	64.865	Macaca_mulatta
ENSANAG00000030088	-	99	72.654	ENSMMUG00000004017	APOBEC3F	99	72.654	Macaca_mulatta
ENSANAG00000030088	-	99	67.766	ENSMNEG00000043316	APOBEC3D	100	67.342	Macaca_nemestrina
ENSANAG00000030088	-	97	65.591	ENSMNEG00000045196	APOBEC3C	100	66.316	Macaca_nemestrina
ENSANAG00000030088	-	97	67.568	ENSMLEG00000036992	APOBEC3C	100	67.895	Mandrillus_leucophaeus
ENSANAG00000030088	-	99	68.365	ENSMLEG00000029642	APOBEC3F	100	68.421	Mandrillus_leucophaeus
ENSANAG00000030088	-	96	52.356	ENSMICG00000042615	-	91	52.356	Microcebus_murinus
ENSANAG00000030088	-	94	47.692	ENSMLUG00000023676	-	99	47.692	Myotis_lucifugus
ENSANAG00000030088	-	97	66.667	ENSNLEG00000028392	APOBEC3C	100	67.368	Nomascus_leucogenys
ENSANAG00000030088	-	99	66.494	ENSNLEG00000035811	-	100	66.494	Nomascus_leucogenys
ENSANAG00000030088	-	96	45.330	ENSOGAG00000033404	-	99	46.995	Otolemur_garnettii
ENSANAG00000030088	-	96	45.405	ENSOGAG00000030300	-	99	45.405	Otolemur_garnettii
ENSANAG00000030088	-	94	50.811	ENSOGAG00000032498	-	99	50.811	Otolemur_garnettii
ENSANAG00000030088	-	98	66.139	ENSPPAG00000028218	-	100	65.789	Pan_paniscus
ENSANAG00000030088	-	97	68.817	ENSPPAG00000014118	APOBEC3C	100	69.474	Pan_paniscus
ENSANAG00000030088	-	95	48.649	ENSPPRG00000003726	-	98	48.663	Panthera_pardus
ENSANAG00000030088	-	98	73.514	ENSPTRG00000014385	APOBEC3C	99	73.514	Pan_troglodytes
ENSANAG00000030088	-	99	65.803	ENSPTRG00000041588	APOBEC3D	100	66.316	Pan_troglodytes
ENSANAG00000030088	-	97	67.895	ENSPANG00000010775	APOBEC3F	100	67.895	Papio_anubis
ENSANAG00000030088	-	97	67.742	ENSPPYG00000011832	APOBEC3C	100	68.421	Pongo_abelii
ENSANAG00000030088	-	66	61.600	ENSPCOG00000018072	-	100	61.600	Propithecus_coquereli
ENSANAG00000030088	-	66	61.240	ENSPCOG00000022067	-	98	61.240	Propithecus_coquereli
ENSANAG00000030088	-	91	48.062	ENSPVAG00000009461	-	73	48.062	Pteropus_vampyrus
ENSANAG00000030088	-	98	68.254	ENSRBIG00000030323	-	100	68.947	Rhinopithecus_bieti
ENSANAG00000030088	-	94	68.889	ENSRBIG00000042297	-	99	68.889	Rhinopithecus_bieti
ENSANAG00000030088	-	98	68.421	ENSRBIG00000030834	-	100	68.557	Rhinopithecus_bieti
ENSANAG00000030088	-	94	68.889	ENSRROG00000029996	-	99	68.889	Rhinopithecus_roxellana
ENSANAG00000030088	-	99	70.856	ENSRROG00000028557	-	100	70.856	Rhinopithecus_roxellana
ENSANAG00000030088	-	99	67.024	ENSRROG00000029045	APOBEC3C	100	68.947	Rhinopithecus_roxellana
ENSANAG00000030088	-	96	87.908	ENSSBOG00000032780	-	100	87.908	Saimiri_boliviensis_boliviensis
ENSANAG00000030088	-	90	46.409	ENSUAMG00000004433	-	99	46.409	Ursus_americanus
ENSANAG00000030088	-	94	45.789	ENSUMAG00000014441	-	88	45.789	Ursus_maritimus
ENSANAG00000030088	-	75	53.020	ENSVVUG00000014628	-	91	52.740	Vulpes_vulpes