EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000030702 (Gene tree)
Gene ID: 105710770
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 3
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 58458 bases
Position: chrKZ196004.1:27340-85797
Accession: 105710770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000026037	KH_1	PF00013.29	5.7e-39	1	2
ENSANAP00000026037	KH_1	PF00013.29	5.7e-39	2	2
ENSANAP00000026033	KH_1	PF00013.29	6.2e-39	1	2
ENSANAP00000026033	KH_1	PF00013.29	6.2e-39	2	2
ENSANAP00000026022	KH_1	PF00013.29	1.1e-38	1	2
ENSANAP00000026022	KH_1	PF00013.29	1.1e-38	2	2
ENSANAP00000026037	KH_2	PF07650.17	9e-11	1	1
ENSANAP00000026022	KH_2	PF07650.17	1.5e-10	1	1
ENSANAP00000026033	KH_2	PF07650.17	2.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000043946	-	843	XM_012443252	ENSANAP00000026022	280 (aa)	XP_012298675	A0A2K5DYP4
ENSANAT00000043961	-	699	XM_021670575	ENSANAP00000026037	232 (aa)	XP_021526250	A0A2K5DYQ8
ENSANAT00000043957	-	717	XM_021670572	ENSANAP00000026033	238 (aa)	XP_021526247	A0A2K5DYS8

Gene Model

Click here to download ENSANAG00000030702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000030702's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000030702	-	98	54.317	ENSANAG00000026077	-	92	54.317
ENSANAG00000030702	-	99	63.701	ENSANAG00000023938	-	80	63.701
ENSANAG00000030702	-	96	61.842	ENSANAG00000023072	PCBP4	72	51.613
ENSANAG00000030702	-	99	65.447	ENSANAG00000033377	-	95	65.447
ENSANAG00000030702	-	89	41.538	ENSANAG00000022520	NOVA2	55	40.845
ENSANAG00000030702	-	96	61.679	ENSANAG00000026989	-	95	53.480
ENSANAG00000030702	-	99	66.390	ENSANAG00000027108	-	85	66.390
ENSANAG00000030702	-	99	79.832	ENSANAG00000032275	PCBP2	96	67.578
ENSANAG00000030702	-	99	61.278	ENSANAG00000022494	-	97	61.278
ENSANAG00000030702	-	94	42.254	ENSANAG00000028004	NOVA1	58	42.254
ENSANAG00000030702	-	97	63.177	ENSANAG00000031745	-	95	63.177
ENSANAG00000030702	-	99	61.620	ENSANAG00000019364	-	97	61.620

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000030702	-	99	92.827	ENSAPOG00000020003	pcbp3	68	92.827	Acanthochromis_polyacanthus
ENSANAG00000030702	-	100	95.062	ENSAPOG00000016582	-	91	96.930	Acanthochromis_polyacanthus
ENSANAG00000030702	-	100	92.607	ENSAMEG00000001697	-	96	87.132	Ailuropoda_melanoleuca
ENSANAG00000030702	-	100	93.878	ENSACIG00000002739	-	75	93.878	Amphilophus_citrinellus
ENSANAG00000030702	-	91	94.318	ENSACIG00000010933	pcbp3	73	87.085	Amphilophus_citrinellus
ENSANAG00000030702	-	100	91.600	ENSAOCG00000007806	-	85	91.600	Amphiprion_ocellaris
ENSANAG00000030702	-	95	95.595	ENSAOCG00000008592	-	93	95.595	Amphiprion_ocellaris
ENSANAG00000030702	-	96	87.454	ENSAPEG00000008011	pcbp3	91	87.454	Amphiprion_percula
ENSANAG00000030702	-	100	97.059	ENSAPEG00000005209	-	95	79.845	Amphiprion_percula
ENSANAG00000030702	-	100	97.059	ENSATEG00000009833	-	95	79.845	Anabas_testudineus
ENSANAG00000030702	-	96	87.778	ENSATEG00000015787	-	77	87.778	Anabas_testudineus
ENSANAG00000030702	-	100	92.857	ENSAPLG00000002975	-	96	92.857	Anas_platyrhynchos
ENSANAG00000030702	-	96	74.275	ENSAPLG00000008951	-	77	74.275	Anas_platyrhynchos
ENSANAG00000030702	-	100	92.883	ENSACAG00000004607	-	96	92.883	Anolis_carolinensis
ENSANAG00000030702	-	100	82.375	ENSACAG00000009819	-	95	82.375	Anolis_carolinensis
ENSANAG00000030702	-	96	87.085	ENSACLG00000011835	pcbp3	91	87.085	Astatotilapia_calliptera
ENSANAG00000030702	-	100	96.218	ENSACLG00000003801	-	95	96.218	Astatotilapia_calliptera
ENSANAG00000030702	-	96	88.930	ENSAMXG00000003440	pcbp3	91	88.930	Astyanax_mexicanus
ENSANAG00000030702	-	96	68.077	ENSAMXG00000001760	zgc:110045	57	68.077	Astyanax_mexicanus
ENSANAG00000030702	-	95	92.952	ENSAMXG00000013588	-	92	77.236	Astyanax_mexicanus
ENSANAG00000030702	-	90	100.000	ENSCAFG00020019472	-	79	100.000	Canis_lupus_dingo
ENSANAG00000030702	-	100	99.580	ENSCSAG00000007440	-	87	99.580	Chlorocebus_sabaeus
ENSANAG00000030702	-	96	85.926	ENSCPBG00000000733	-	71	81.673	Chrysemys_picta_bellii
ENSANAG00000030702	-	96	98.684	ENSCPBG00000012151	-	96	91.085	Chrysemys_picta_bellii
ENSANAG00000030702	-	95	94.273	ENSCSEG00000000822	pcbp3	90	86.093	Cynoglossus_semilaevis
ENSANAG00000030702	-	91	94.318	ENSCSEG00000016984	-	71	94.595	Cynoglossus_semilaevis
ENSANAG00000030702	-	100	97.059	ENSCVAG00000005262	-	95	97.059	Cyprinodon_variegatus
ENSANAG00000030702	-	96	87.778	ENSCVAG00000014482	pcbp3	91	87.778	Cyprinodon_variegatus
ENSANAG00000030702	-	100	89.324	ENSDARG00000054378	pcbp3	99	89.091	Danio_rerio
ENSANAG00000030702	-	100	99.580	ENSETEG00000015988	-	75	99.580	Echinops_telfairi
ENSANAG00000030702	-	91	70.588	ENSEBUG00000005495	pcbp3	65	63.514	Eptatretus_burgeri
ENSANAG00000030702	-	100	75.000	ENSEBUG00000016192	pcbp3	85	75.000	Eptatretus_burgeri
ENSANAG00000030702	-	100	80.335	ENSEBUG00000007485	-	90	64.336	Eptatretus_burgeri
ENSANAG00000030702	-	96	96.491	ENSELUG00000001560	-	82	96.491	Esox_lucius
ENSANAG00000030702	-	97	87.983	ENSELUG00000003521	pcbp3	91	87.823	Esox_lucius
ENSANAG00000030702	-	96	74.275	ENSFALG00000004411	-	73	74.275	Ficedula_albicollis
ENSANAG00000030702	-	100	97.479	ENSFALG00000003949	-	96	97.479	Ficedula_albicollis
ENSANAG00000030702	-	97	94.783	ENSFHEG00000016615	pcbp3	89	77.912	Fundulus_heteroclitus
ENSANAG00000030702	-	100	97.059	ENSFHEG00000006539	-	75	97.059	Fundulus_heteroclitus
ENSANAG00000030702	-	95	80.242	ENSGMOG00000008611	-	75	80.242	Gadus_morhua
ENSANAG00000030702	-	96	83.186	ENSGMOG00000011992	pcbp3	92	83.186	Gadus_morhua
ENSANAG00000030702	-	98	80.859	ENSGALG00000013155	-	93	80.000	Gallus_gallus
ENSANAG00000030702	-	100	98.214	ENSGALG00000004394	-	87	89.437	Gallus_gallus
ENSANAG00000030702	-	96	96.491	ENSGAFG00000010274	-	91	96.491	Gambusia_affinis
ENSANAG00000030702	-	98	86.909	ENSGAFG00000011430	pcbp3	74	86.909	Gambusia_affinis
ENSANAG00000030702	-	100	87.645	ENSGACG00000002266	-	96	87.645	Gasterosteus_aculeatus
ENSANAG00000030702	-	100	76.071	ENSGACG00000014955	-	96	76.071	Gasterosteus_aculeatus
ENSANAG00000030702	-	94	90.179	ENSGAGG00000000271	-	84	90.179	Gopherus_agassizii
ENSANAG00000030702	-	73	99.107	ENSGAGG00000006956	-	68	80.791	Gopherus_agassizii
ENSANAG00000030702	-	100	96.218	ENSHBUG00000021782	-	95	96.218	Haplochromis_burtoni
ENSANAG00000030702	-	95	94.714	ENSHBUG00000010697	pcbp3	91	87.407	Haplochromis_burtoni
ENSANAG00000030702	-	100	90.756	ENSHCOG00000006067	-	95	90.756	Hippocampus_comes
ENSANAG00000030702	-	96	87.778	ENSHCOG00000017868	pcbp3	91	87.778	Hippocampus_comes
ENSANAG00000030702	-	100	97.479	ENSIPUG00000006238	pcbp3	96	89.680	Ictalurus_punctatus
ENSANAG00000030702	-	96	96.053	ENSKMAG00000018530	-	91	96.053	Kryptolebias_marmoratus
ENSANAG00000030702	-	96	87.454	ENSKMAG00000003046	pcbp3	91	87.454	Kryptolebias_marmoratus
ENSANAG00000030702	-	99	93.617	ENSLBEG00000006201	pcbp3	93	76.471	Labrus_bergylta
ENSANAG00000030702	-	100	88.889	ENSLBEG00000006542	-	82	88.889	Labrus_bergylta
ENSANAG00000030702	-	96	82.313	ENSLACG00000010386	pcbp3	72	82.313	Latimeria_chalumnae
ENSANAG00000030702	-	96	74.359	ENSLACG00000010804	zgc:110045	72	74.359	Latimeria_chalumnae
ENSANAG00000030702	-	96	80.876	ENSLOCG00000005058	zgc:110045	78	80.876	Lepisosteus_oculatus
ENSANAG00000030702	-	100	89.324	ENSLOCG00000009369	pcbp3	96	89.324	Lepisosteus_oculatus
ENSANAG00000030702	-	100	96.218	ENSMAMG00000011620	-	75	96.218	Mastacembelus_armatus
ENSANAG00000030702	-	97	94.348	ENSMAMG00000022336	pcbp3	71	94.348	Mastacembelus_armatus
ENSANAG00000030702	-	96	85.774	ENSMZEG00005014882	-	93	72.325	Maylandia_zebra
ENSANAG00000030702	-	91	94.318	ENSMZEG00005008993	pcbp3	94	70.896	Maylandia_zebra
ENSANAG00000030702	-	95	77.323	ENSMGAG00000001883	-	91	77.695	Meleagris_gallopavo
ENSANAG00000030702	-	96	74.275	ENSMGAG00000006794	-	73	74.275	Meleagris_gallopavo
ENSANAG00000030702	-	95	95.154	ENSMMOG00000000730	pcbp3	83	78.049	Mola_mola
ENSANAG00000030702	-	100	95.798	ENSMMOG00000005216	-	76	95.798	Mola_mola
ENSANAG00000030702	-	95	98.131	ENSMODG00000027884	-	93	98.131	Monodelphis_domestica
ENSANAG00000030702	-	96	87.732	ENSMALG00000000691	pcbp3	91	71.193	Monopterus_albus
ENSANAG00000030702	-	100	91.085	ENSMPUG00000001779	-	71	91.085	Mustela_putorius_furo
ENSANAG00000030702	-	96	87.407	ENSNBRG00000016409	-	73	87.407	Neolamprologus_brichardi
ENSANAG00000030702	-	91	95.455	ENSNBRG00000016714	-	94	72.119	Neolamprologus_brichardi
ENSANAG00000030702	-	96	98.507	ENSOPRG00000003431	-	96	80.597	Ochotona_princeps
ENSANAG00000030702	-	100	96.218	ENSONIG00000004611	-	95	96.218	Oreochromis_niloticus
ENSANAG00000030702	-	96	89.219	ENSONIG00000012122	-	93	89.219	Oreochromis_niloticus
ENSANAG00000030702	-	100	99.160	ENSOCUG00000002696	-	87	99.160	Oryctolagus_cuniculus
ENSANAG00000030702	-	95	95.595	ENSORLG00000000059	pcbp3	95	95.595	Oryzias_latipes
ENSANAG00000030702	-	100	96.639	ENSORLG00000022739	-	95	96.639	Oryzias_latipes
ENSANAG00000030702	-	95	95.595	ENSORLG00020012671	pcbp3	93	95.595	Oryzias_latipes_hni
ENSANAG00000030702	-	100	96.218	ENSORLG00020006124	-	95	96.218	Oryzias_latipes_hni
ENSANAG00000030702	-	99	94.894	ENSORLG00015008051	-	92	94.894	Oryzias_latipes_hsok
ENSANAG00000030702	-	95	95.595	ENSORLG00015000429	pcbp3	93	95.595	Oryzias_latipes_hsok
ENSANAG00000030702	-	100	96.218	ENSOMEG00000020162	-	95	96.218	Oryzias_melastigma
ENSANAG00000030702	-	95	95.595	ENSOMEG00000020811	pcbp3	99	76.562	Oryzias_melastigma
ENSANAG00000030702	-	100	83.849	ENSOGAG00000008044	-	96	83.849	Otolemur_garnettii
ENSANAG00000030702	-	100	97.059	ENSPKIG00000019329	pcbp3	90	96.930	Paramormyrops_kingsleyae
ENSANAG00000030702	-	91	88.636	ENSPKIG00000020913	-	63	88.636	Paramormyrops_kingsleyae
ENSANAG00000030702	-	100	80.392	ENSPSIG00000014970	-	96	81.176	Pelodiscus_sinensis
ENSANAG00000030702	-	94	82.114	ENSPSIG00000008350	-	68	82.114	Pelodiscus_sinensis
ENSANAG00000030702	-	96	87.732	ENSPMGG00000022383	pcbp3	91	87.732	Periophthalmus_magnuspinnatus
ENSANAG00000030702	-	91	88.636	ENSPMAG00000004637	-	93	89.286	Petromyzon_marinus
ENSANAG00000030702	-	99	74.274	ENSPMAG00000004551	pcbp3	92	60.311	Petromyzon_marinus
ENSANAG00000030702	-	100	91.459	ENSPCIG00000028092	-	96	91.459	Phascolarctos_cinereus
ENSANAG00000030702	-	100	91.633	ENSPLAG00000004074	-	87	81.323	Poecilia_latipinna
ENSANAG00000030702	-	98	89.051	ENSPLAG00000011449	pcbp3	70	89.051	Poecilia_latipinna
ENSANAG00000030702	-	100	87.452	ENSPMEG00000006653	-	93	77.695	Poecilia_mexicana
ENSANAG00000030702	-	91	95.455	ENSPMEG00000021239	pcbp3	91	71.004	Poecilia_mexicana
ENSANAG00000030702	-	100	97.059	ENSPREG00000020585	-	87	97.619	Poecilia_reticulata
ENSANAG00000030702	-	95	95.595	ENSPREG00000015736	pcbp3	74	95.595	Poecilia_reticulata
ENSANAG00000030702	-	100	96.218	ENSPNYG00000013205	-	93	79.457	Pundamilia_nyererei
ENSANAG00000030702	-	95	95.154	ENSPNYG00000012326	pcbp3	91	77.328	Pundamilia_nyererei
ENSANAG00000030702	-	95	93.778	ENSPNAG00000008541	-	91	86.347	Pygocentrus_nattereri
ENSANAG00000030702	-	100	97.059	ENSPNAG00000015104	pcbp3	95	97.059	Pygocentrus_nattereri
ENSANAG00000030702	-	100	100.000	ENSRNOG00000001245	Pcbp3	96	100.000	Rattus_norvegicus
ENSANAG00000030702	-	96	94.526	ENSRBIG00000028177	-	75	94.526	Rhinopithecus_bieti
ENSANAG00000030702	-	100	97.727	ENSSHAG00000007890	-	96	91.085	Sarcophilus_harrisii
ENSANAG00000030702	-	96	88.148	ENSSFOG00015014706	pcbp3	91	88.148	Scleropages_formosus
ENSANAG00000030702	-	100	84.454	ENSSFOG00015007118	-	73	84.454	Scleropages_formosus
ENSANAG00000030702	-	96	96.491	ENSSFOG00015010205	pcbp3	90	96.491	Scleropages_formosus
ENSANAG00000030702	-	100	96.218	ENSSMAG00000003135	-	95	96.218	Scophthalmus_maximus
ENSANAG00000030702	-	95	95.595	ENSSMAG00000011929	pcbp3	73	95.595	Scophthalmus_maximus
ENSANAG00000030702	-	96	90.476	ENSSDUG00000008502	-	91	71.186	Seriola_dumerili
ENSANAG00000030702	-	96	88.104	ENSSDUG00000011608	pcbp3	76	88.104	Seriola_dumerili
ENSANAG00000030702	-	96	96.930	ENSSLDG00000020161	-	91	96.930	Seriola_lalandi_dorsalis
ENSANAG00000030702	-	96	88.104	ENSSLDG00000008518	pcbp3	76	88.104	Seriola_lalandi_dorsalis
ENSANAG00000030702	-	91	93.182	ENSSPUG00000013214	-	70	93.182	Sphenodon_punctatus
ENSANAG00000030702	-	96	75.092	ENSSPAG00000023341	-	70	75.092	Stegastes_partitus
ENSANAG00000030702	-	100	92.000	ENSSPAG00000004190	-	85	92.000	Stegastes_partitus
ENSANAG00000030702	-	100	90.698	ENSTGUG00000003316	-	76	90.698	Taeniopygia_guttata
ENSANAG00000030702	-	100	89.916	ENSTGUG00000008158	-	96	89.916	Taeniopygia_guttata
ENSANAG00000030702	-	91	96.591	ENSTRUG00000013604	pcbp3	79	95.798	Takifugu_rubripes
ENSANAG00000030702	-	100	96.639	ENSTRUG00000006280	-	76	96.639	Takifugu_rubripes
ENSANAG00000030702	-	100	97.857	ENSTTRG00000015075	-	96	97.857	Tursiops_truncatus
ENSANAG00000030702	-	96	73.551	ENSXETG00000010491	pcbp2	73	61.565	Xenopus_tropicalis
ENSANAG00000030702	-	100	87.597	ENSXETG00000011483	pcbp1	96	87.597	Xenopus_tropicalis
ENSANAG00000030702	-	96	87.732	ENSXCOG00000020481	pcbp3	91	71.004	Xiphophorus_couchianus
ENSANAG00000030702	-	96	87.454	ENSXMAG00000008175	pcbp3	91	87.454	Xiphophorus_maculatus
ENSANAG00000030702	-	96	96.930	ENSXMAG00000028711	-	91	96.930	Xiphophorus_maculatus