EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000031025 (Gene tree)
Gene ID: 105724190
Gene Symbol: SF3B4
Alias: Hsh49|SAP49|SF3b49
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 5401 bases
Position: chrKZ201976.1:54415-59815
Accession: 105724190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000026605	RRM_1	PF00076.22	4.5e-39	1	2
ENSANAP00000026605	RRM_1	PF00076.22	4.5e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000044547	SF3B4-201	1275	XM_012462552	ENSANAP00000026605	424 (aa)	XP_012317975	A0A2K5E090

Gene Model

Click here to download ENSANAG00000031025's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000031025's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000031025	SF3B4	54	41.530	ENSANAG00000017199	PABPC4L	84	41.530
ENSANAG00000031025	SF3B4	60	37.566	ENSANAG00000026826	PABPC1L	59	37.037
ENSANAG00000031025	SF3B4	56	30.189	ENSANAG00000035841	-	57	30.189
ENSANAG00000031025	SF3B4	70	39.344	ENSANAG00000033352	-	57	39.344

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000031025	SF3B4	100	100.000	ENSG00000143368	SF3B4	100	100.000	Homo_sapiens
ENSANAG00000031025	SF3B4	57	96.667	ENSAPOG00000017647	sf3b4	77	82.445	Acanthochromis_polyacanthus
ENSANAG00000031025	SF3B4	100	99.764	ENSAMEG00000010073	SF3B4	100	99.764	Ailuropoda_melanoleuca
ENSANAG00000031025	SF3B4	57	96.667	ENSAOCG00000019801	sf3b4	77	82.445	Amphiprion_ocellaris
ENSANAG00000031025	SF3B4	57	96.667	ENSAPEG00000010365	sf3b4	77	82.445	Amphiprion_percula
ENSANAG00000031025	SF3B4	57	96.250	ENSATEG00000012844	sf3b4	76	81.562	Anabas_testudineus
ENSANAG00000031025	SF3B4	62	96.198	ENSACAG00000010019	SF3B4	90	89.817	Anolis_carolinensis
ENSANAG00000031025	SF3B4	57	95.833	ENSACLG00000014260	sf3b4	76	81.505	Astatotilapia_calliptera
ENSANAG00000031025	SF3B4	57	96.250	ENSAMXG00000008282	sf3b4	60	96.250	Astyanax_mexicanus
ENSANAG00000031025	SF3B4	91	96.354	ENSBTAG00000012793	-	93	96.354	Bos_taurus
ENSANAG00000031025	SF3B4	100	99.764	ENSBTAG00000012495	SF3B4	100	99.764	Bos_taurus
ENSANAG00000031025	SF3B4	90	82.474	ENSCJAG00000042351	SF3B4	87	82.474	Callithrix_jacchus
ENSANAG00000031025	SF3B4	100	99.292	ENSCAFG00000011617	SF3B4	100	99.292	Canis_familiaris
ENSANAG00000031025	SF3B4	100	99.292	ENSCAFG00020019775	SF3B4	100	99.292	Canis_lupus_dingo
ENSANAG00000031025	SF3B4	100	99.764	ENSCHIG00000025663	-	100	99.764	Capra_hircus
ENSANAG00000031025	SF3B4	100	100.000	ENSTSYG00000009295	SF3B4	100	100.000	Carlito_syrichta
ENSANAG00000031025	SF3B4	100	99.528	ENSCPOG00000008267	SF3B4	100	99.528	Cavia_porcellus
ENSANAG00000031025	SF3B4	95	85.821	ENSCCAG00000019823	-	77	86.810	Cebus_capucinus
ENSANAG00000031025	SF3B4	100	87.202	ENSCCAG00000021751	-	69	93.210	Cebus_capucinus
ENSANAG00000031025	SF3B4	100	100.000	ENSCATG00000033114	SF3B4	100	100.000	Cercocebus_atys
ENSANAG00000031025	SF3B4	100	99.528	ENSCLAG00000015851	SF3B4	100	99.528	Chinchilla_lanigera
ENSANAG00000031025	SF3B4	100	100.000	ENSCSAG00000018129	SF3B4	100	100.000	Chlorocebus_sabaeus
ENSANAG00000031025	SF3B4	99	85.849	ENSCPBG00000008041	SF3B4	91	90.625	Chrysemys_picta_bellii
ENSANAG00000031025	SF3B4	50	90.654	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSANAG00000031025	SF3B4	100	100.000	ENSCANG00000035579	SF3B4	100	100.000	Colobus_angolensis_palliatus
ENSANAG00000031025	SF3B4	100	99.528	ENSCGRG00001003590	Sf3b4	100	99.528	Cricetulus_griseus_chok1gshd
ENSANAG00000031025	SF3B4	100	99.528	ENSCGRG00000016914	Sf3b4	100	99.528	Cricetulus_griseus_crigri
ENSANAG00000031025	SF3B4	57	96.250	ENSDARG00000018574	sf3b4	77	80.878	Danio_rerio
ENSANAG00000031025	SF3B4	98	96.875	ENSDNOG00000048908	-	99	96.875	Dasypus_novemcinctus
ENSANAG00000031025	SF3B4	97	80.872	ENSDNOG00000037231	-	76	81.789	Dasypus_novemcinctus
ENSANAG00000031025	SF3B4	100	99.764	ENSDORG00000016366	Sf3b4	100	99.764	Dipodomys_ordii
ENSANAG00000031025	SF3B4	76	92.593	ENSETEG00000008963	SF3B4	76	92.593	Echinops_telfairi
ENSANAG00000031025	SF3B4	100	99.764	ENSEASG00005001477	SF3B4	100	99.764	Equus_asinus_asinus
ENSANAG00000031025	SF3B4	100	99.764	ENSECAG00000024737	SF3B4	100	99.764	Equus_caballus
ENSANAG00000031025	SF3B4	100	99.764	ENSFCAG00000010106	SF3B4	100	99.764	Felis_catus
ENSANAG00000031025	SF3B4	100	99.528	ENSFDAG00000009286	SF3B4	100	99.528	Fukomys_damarensis
ENSANAG00000031025	SF3B4	54	96.957	ENSGMOG00000002519	sf3b4	67	97.368	Gadus_morhua
ENSANAG00000031025	SF3B4	99	89.125	ENSGALG00000013352	SF3B4	90	89.556	Gallus_gallus
ENSANAG00000031025	SF3B4	63	92.453	ENSGAFG00000010181	sf3b4	58	97.807	Gambusia_affinis
ENSANAG00000031025	SF3B4	99	85.613	ENSGAGG00000025055	SF3B4	79	90.365	Gopherus_agassizii
ENSANAG00000031025	SF3B4	100	73.821	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSANAG00000031025	SF3B4	100	100.000	ENSGGOG00000004761	SF3B4	100	100.000	Gorilla_gorilla
ENSANAG00000031025	SF3B4	57	95.833	ENSHBUG00000002028	sf3b4	76	81.505	Haplochromis_burtoni
ENSANAG00000031025	SF3B4	100	99.528	ENSHGLG00000012360	SF3B4	100	99.528	Heterocephalus_glaber_female
ENSANAG00000031025	SF3B4	100	98.349	ENSHGLG00100008533	SF3B4	100	98.349	Heterocephalus_glaber_male
ENSANAG00000031025	SF3B4	50	99.531	ENSHCOG00000003014	sf3b4	57	96.491	Hippocampus_comes
ENSANAG00000031025	SF3B4	57	96.667	ENSIPUG00000012242	Sf3b4	77	81.250	Ictalurus_punctatus
ENSANAG00000031025	SF3B4	100	99.764	ENSSTOG00000000684	-	100	99.764	Ictidomys_tridecemlineatus
ENSANAG00000031025	SF3B4	93	71.501	ENSSTOG00000029627	-	74	67.913	Ictidomys_tridecemlineatus
ENSANAG00000031025	SF3B4	76	84.052	ENSJJAG00000022500	Sf3b4	95	84.052	Jaculus_jaculus
ENSANAG00000031025	SF3B4	56	96.203	ENSKMAG00000008154	sf3b4	58	98.246	Kryptolebias_marmoratus
ENSANAG00000031025	SF3B4	55	97.425	ENSLBEG00000026818	sf3b4	57	98.246	Labrus_bergylta
ENSANAG00000031025	SF3B4	57	95.473	ENSLACG00000004436	SF3B4	87	85.312	Latimeria_chalumnae
ENSANAG00000031025	SF3B4	57	95.885	ENSLOCG00000009048	sf3b4	75	85.266	Lepisosteus_oculatus
ENSANAG00000031025	SF3B4	100	99.294	ENSLAFG00000008531	SF3B4	100	99.294	Loxodonta_africana
ENSANAG00000031025	SF3B4	100	100.000	ENSMFAG00000042395	SF3B4	100	100.000	Macaca_fascicularis
ENSANAG00000031025	SF3B4	92	71.066	ENSMFAG00000039067	-	57	80.841	Macaca_fascicularis
ENSANAG00000031025	SF3B4	100	100.000	ENSMMUG00000007256	SF3B4	100	100.000	Macaca_mulatta
ENSANAG00000031025	SF3B4	92	70.558	ENSMNEG00000031526	-	57	80.374	Macaca_nemestrina
ENSANAG00000031025	SF3B4	100	100.000	ENSMNEG00000031839	SF3B4	100	100.000	Macaca_nemestrina
ENSANAG00000031025	SF3B4	100	100.000	ENSMLEG00000038667	SF3B4	100	100.000	Mandrillus_leucophaeus
ENSANAG00000031025	SF3B4	57	97.083	ENSMAMG00000014692	sf3b4	60	97.083	Mastacembelus_armatus
ENSANAG00000031025	SF3B4	57	95.833	ENSMZEG00005026741	sf3b4	76	81.505	Maylandia_zebra
ENSANAG00000031025	SF3B4	99	87.707	ENSMGAG00000000653	SF3B4	91	88.083	Meleagris_gallopavo
ENSANAG00000031025	SF3B4	100	99.528	ENSMAUG00000015266	Sf3b4	100	99.528	Mesocricetus_auratus
ENSANAG00000031025	SF3B4	100	99.764	ENSMICG00000044961	SF3B4	100	99.764	Microcebus_murinus
ENSANAG00000031025	SF3B4	98	94.458	ENSMOCG00000014155	-	100	94.458	Microtus_ochrogaster
ENSANAG00000031025	SF3B4	100	99.528	ENSMOCG00000013658	-	100	99.528	Microtus_ochrogaster
ENSANAG00000031025	SF3B4	54	97.826	ENSMMOG00000018032	sf3b4	58	97.807	Mola_mola
ENSANAG00000031025	SF3B4	100	99.057	ENSMODG00000018767	SF3B4	100	99.057	Monodelphis_domestica
ENSANAG00000031025	SF3B4	54	97.797	ENSMALG00000006174	sf3b4	57	97.368	Monopterus_albus
ENSANAG00000031025	SF3B4	100	99.292	MGP_CAROLIEiJ_G0025365	Sf3b4	100	99.292	Mus_caroli
ENSANAG00000031025	SF3B4	100	99.528	ENSMUSG00000068856	Sf3b4	100	99.528	Mus_musculus
ENSANAG00000031025	SF3B4	100	99.528	MGP_PahariEiJ_G0026809	Sf3b4	100	99.528	Mus_pahari
ENSANAG00000031025	SF3B4	100	99.528	MGP_SPRETEiJ_G0026309	Sf3b4	100	99.528	Mus_spretus
ENSANAG00000031025	SF3B4	100	99.764	ENSMPUG00000005563	SF3B4	100	99.764	Mustela_putorius_furo
ENSANAG00000031025	SF3B4	100	99.528	ENSMLUG00000010789	SF3B4	100	99.528	Myotis_lucifugus
ENSANAG00000031025	SF3B4	100	99.292	ENSNGAG00000016337	Sf3b4	100	99.292	Nannospalax_galili
ENSANAG00000031025	SF3B4	57	96.250	ENSNBRG00000013865	sf3b4	76	81.818	Neolamprologus_brichardi
ENSANAG00000031025	SF3B4	100	70.327	ENSNLEG00000009693	-	100	70.327	Nomascus_leucogenys
ENSANAG00000031025	SF3B4	100	76.887	ENSNLEG00000000537	-	82	85.185	Nomascus_leucogenys
ENSANAG00000031025	SF3B4	81	100.000	ENSMEUG00000003272	SF3B4	82	100.000	Notamacropus_eugenii
ENSANAG00000031025	SF3B4	99	97.150	ENSOPRG00000010808	SF3B4	99	97.150	Ochotona_princeps
ENSANAG00000031025	SF3B4	75	86.751	ENSODEG00000003597	-	79	86.751	Octodon_degus
ENSANAG00000031025	SF3B4	88	72.922	ENSODEG00000008916	-	84	71.827	Octodon_degus
ENSANAG00000031025	SF3B4	56	95.359	ENSONIG00000002730	sf3b4	57	97.807	Oreochromis_niloticus
ENSANAG00000031025	SF3B4	99	57.907	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSANAG00000031025	SF3B4	100	99.764	ENSOCUG00000004614	SF3B4	100	99.764	Oryctolagus_cuniculus
ENSANAG00000031025	SF3B4	55	96.983	ENSORLG00000003062	sf3b4	59	97.807	Oryzias_latipes
ENSANAG00000031025	SF3B4	100	99.764	ENSOGAG00000006265	SF3B4	100	99.764	Otolemur_garnettii
ENSANAG00000031025	SF3B4	86	78.571	ENSOARG00000007368	-	77	79.375	Ovis_aries
ENSANAG00000031025	SF3B4	100	99.764	ENSOARG00000020718	-	100	99.764	Ovis_aries
ENSANAG00000031025	SF3B4	100	81.840	ENSPPAG00000030024	-	78	82.716	Pan_paniscus
ENSANAG00000031025	SF3B4	100	100.000	ENSPPAG00000040904	SF3B4	100	100.000	Pan_paniscus
ENSANAG00000031025	SF3B4	100	99.764	ENSPPRG00000007384	SF3B4	100	99.764	Panthera_pardus
ENSANAG00000031025	SF3B4	100	99.292	ENSPTIG00000014530	SF3B4	100	99.292	Panthera_tigris_altaica
ENSANAG00000031025	SF3B4	100	79.009	ENSPTRG00000049727	-	59	90.254	Pan_troglodytes
ENSANAG00000031025	SF3B4	100	100.000	ENSPTRG00000001243	SF3B4	100	100.000	Pan_troglodytes
ENSANAG00000031025	SF3B4	100	100.000	ENSPANG00000005126	SF3B4	100	100.000	Papio_anubis
ENSANAG00000031025	SF3B4	55	97.425	ENSPKIG00000020669	sf3b4	60	98.246	Paramormyrops_kingsleyae
ENSANAG00000031025	SF3B4	100	99.528	ENSPEMG00000017568	Sf3b4	100	99.528	Peromyscus_maniculatus_bairdii
ENSANAG00000031025	SF3B4	61	88.716	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSANAG00000031025	SF3B4	100	99.057	ENSPCIG00000008765	SF3B4	100	99.057	Phascolarctos_cinereus
ENSANAG00000031025	SF3B4	56	95.359	ENSPFOG00000005754	sf3b4	58	97.368	Poecilia_formosa
ENSANAG00000031025	SF3B4	56	95.359	ENSPLAG00000001401	sf3b4	63	97.368	Poecilia_latipinna
ENSANAG00000031025	SF3B4	56	95.359	ENSPREG00000011076	sf3b4	57	97.807	Poecilia_reticulata
ENSANAG00000031025	SF3B4	63	96.635	ENSPCAG00000000392	SF3B4	63	96.635	Procavia_capensis
ENSANAG00000031025	SF3B4	100	99.764	ENSPCOG00000015399	SF3B4	100	99.764	Propithecus_coquereli
ENSANAG00000031025	SF3B4	100	99.764	ENSPVAG00000014171	SF3B4	100	99.764	Pteropus_vampyrus
ENSANAG00000031025	SF3B4	57	95.833	ENSPNYG00000012700	sf3b4	76	81.505	Pundamilia_nyererei
ENSANAG00000031025	SF3B4	57	96.667	ENSPNAG00000000686	sf3b4	79	80.938	Pygocentrus_nattereri
ENSANAG00000031025	SF3B4	100	99.528	ENSRNOG00000021181	Sf3b4	100	99.528	Rattus_norvegicus
ENSANAG00000031025	SF3B4	100	100.000	ENSRBIG00000043392	SF3B4	100	100.000	Rhinopithecus_bieti
ENSANAG00000031025	SF3B4	92	71.722	ENSRROG00000028213	-	91	67.914	Rhinopithecus_roxellana
ENSANAG00000031025	SF3B4	100	100.000	ENSRROG00000029366	SF3B4	100	100.000	Rhinopithecus_roxellana
ENSANAG00000031025	SF3B4	100	72.877	ENSSBOG00000025174	-	73	79.567	Saimiri_boliviensis_boliviensis
ENSANAG00000031025	SF3B4	100	99.764	ENSSBOG00000012310	-	100	99.764	Saimiri_boliviensis_boliviensis
ENSANAG00000031025	SF3B4	100	96.462	ENSSHAG00000004043	SF3B4	100	98.688	Sarcophilus_harrisii
ENSANAG00000031025	SF3B4	56	96.624	ENSSFOG00015008864	sf3b4	56	98.246	Scleropages_formosus
ENSANAG00000031025	SF3B4	57	96.667	ENSSMAG00000006837	sf3b4	77	82.132	Scophthalmus_maximus
ENSANAG00000031025	SF3B4	57	97.083	ENSSDUG00000012064	sf3b4	76	82.188	Seriola_dumerili
ENSANAG00000031025	SF3B4	57	97.083	ENSSLDG00000014226	sf3b4	60	97.083	Seriola_lalandi_dorsalis
ENSANAG00000031025	SF3B4	72	95.102	ENSSPUG00000001028	SF3B4	57	98.684	Sphenodon_punctatus
ENSANAG00000031025	SF3B4	57	97.500	ENSSPAG00000019219	sf3b4	76	82.500	Stegastes_partitus
ENSANAG00000031025	SF3B4	100	99.528	ENSSSCG00000006665	-	100	99.528	Sus_scrofa
ENSANAG00000031025	SF3B4	85	64.365	ENSSSCG00000039440	-	79	65.741	Sus_scrofa
ENSANAG00000031025	SF3B4	56	97.034	ENSTGUG00000004470	SF3B4	90	98.246	Taeniopygia_guttata
ENSANAG00000031025	SF3B4	54	96.916	ENSTRUG00000004516	sf3b4	57	96.491	Takifugu_rubripes
ENSANAG00000031025	SF3B4	54	96.957	ENSTNIG00000009156	sf3b4	58	97.368	Tetraodon_nigroviridis
ENSANAG00000031025	SF3B4	100	99.764	ENSTTRG00000005217	SF3B4	100	99.764	Tursiops_truncatus
ENSANAG00000031025	SF3B4	100	99.764	ENSUAMG00000022468	SF3B4	100	99.764	Ursus_americanus
ENSANAG00000031025	SF3B4	100	98.821	ENSUMAG00000003802	SF3B4	100	98.821	Ursus_maritimus
ENSANAG00000031025	SF3B4	97	99.757	ENSVPAG00000008152	SF3B4	100	99.757	Vicugna_pacos
ENSANAG00000031025	SF3B4	99	92.584	ENSVVUG00000007732	-	100	92.584	Vulpes_vulpes
ENSANAG00000031025	SF3B4	65	96.014	ENSVVUG00000022697	-	58	96.014	Vulpes_vulpes
ENSANAG00000031025	SF3B4	54	97.391	ENSXCOG00000019895	sf3b4	58	97.807	Xiphophorus_couchianus
ENSANAG00000031025	SF3B4	54	97.391	ENSXMAG00000003772	sf3b4	58	97.807	Xiphophorus_maculatus