EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSANAG00000031254 (Gene tree)
Gene ID
105707757
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Aotus_nancymaae
Status
putative
Strand
Minus strand
Length
48331 bases
Position
chrKZ208092.1:8298085-8346415
Accession
105707757
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSANAP00000027060CPSF73-100_CPF11718.81.2e-4012
ENSANAP00000027060CPSF73-100_CPF11718.81.2e-4022
ENSANAP00000027053CPSF73-100_CPF11718.81.4e-4012
ENSANAP00000027053CPSF73-100_CPF11718.81.4e-4022
ENSANAP00000027060Beta-CaspPF10996.87.6e-3411
ENSANAP00000027053Beta-CaspPF10996.87.7e-3411
ENSANAP00000027060Lactamase_BPF00753.271.7e-1811
ENSANAP00000027053Lactamase_BPF00753.271.7e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSANAT00000045039CPSF3-2021968-ENSANAP00000027060655 (aa)-A0A2K5E1D7
ENSANAT00000045031CPSF3-2011980XM_021669035ENSANAP00000027053659 (aa)XP_021524710A0A2K5E1M3
Gene Model
Click here to download ENSANAG00000031254's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000031254's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSANAG00000031254CPSF36540.089ENSANAG00000034133INTS118840.800
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSANAG00000031254CPSF310093.129ENSG00000119203CPSF3100100.000Homo_sapiens
ENSANAG00000031254CPSF39980.781ENSAPOG00000022087cpsf39880.412Acanthochromis_polyacanthus
ENSANAG00000031254CPSF37393.648ENSAPOG00000012241CPSF39092.958Acanthochromis_polyacanthus
ENSANAG00000031254CPSF310092.836ENSAMEG00000008493CPSF310092.836Ailuropoda_melanoleuca
ENSANAG00000031254CPSF39378.185ENSACIG00000009846cpsf39978.185Amphilophus_citrinellus
ENSANAG00000031254CPSF39380.635ENSACIG00000023663CPSF39980.635Amphilophus_citrinellus
ENSANAG00000031254CPSF39982.759ENSAOCG00000010077CPSF39882.353Amphiprion_ocellaris
ENSANAG00000031254CPSF39980.781ENSAOCG00000022056cpsf39485.374Amphiprion_ocellaris
ENSANAG00000031254CPSF39980.931ENSAPEG00000019526cpsf39880.560Amphiprion_percula
ENSANAG00000031254CPSF39982.759ENSAPEG00000021167CPSF39882.353Amphiprion_percula
ENSANAG00000031254CPSF39980.781ENSATEG00000003959cpsf39880.412Anabas_testudineus
ENSANAG00000031254CPSF39978.144ENSATEG00000014525CPSF39877.827Anabas_testudineus
ENSANAG00000031254CPSF39989.655ENSAPLG00000006941CPSF39889.655Anas_platyrhynchos
ENSANAG00000031254CPSF39486.635ENSACAG00000001759CPSF310086.635Anolis_carolinensis
ENSANAG00000031254CPSF39380.794ENSACLG00000018846CPSF39980.794Astatotilapia_calliptera
ENSANAG00000031254CPSF39881.353ENSACLG00000014484cpsf39981.353Astatotilapia_calliptera
ENSANAG00000031254CPSF39984.108ENSAMXG00000004786cpsf39883.676Astyanax_mexicanus
ENSANAG00000031254CPSF310092.982ENSBTAG00000019735CPSF310092.982Bos_taurus
ENSANAG00000031254CPSF39056.891WBGene00013460cpsf-38956.063Caenorhabditis_elegans
ENSANAG00000031254CPSF310092.836ENSCJAG00000006276CPSF310092.836Callithrix_jacchus
ENSANAG00000031254CPSF310092.836ENSCAFG00000003375CPSF39592.836Canis_familiaris
ENSANAG00000031254CPSF39092.569ENSCAFG00020026799CPSF310092.569Canis_lupus_dingo
ENSANAG00000031254CPSF310092.982ENSCHIG00000013973CPSF310092.982Capra_hircus
ENSANAG00000031254CPSF310093.129ENSTSYG00000002967CPSF310093.129Carlito_syrichta
ENSANAG00000031254CPSF39991.904ENSCAPG00000013851CPSF310091.904Cavia_aperea
ENSANAG00000031254CPSF310091.520ENSCPOG00000011299CPSF310091.520Cavia_porcellus
ENSANAG00000031254CPSF310093.185ENSCCAG00000036730CPSF310093.185Cebus_capucinus
ENSANAG00000031254CPSF310090.511ENSCATG00000014770CPSF39992.083Cercocebus_atys
ENSANAG00000031254CPSF310091.082ENSCLAG00000002727CPSF310091.082Chinchilla_lanigera
ENSANAG00000031254CPSF310085.380ENSCSAG00000007125CPSF310085.380Chlorocebus_sabaeus
ENSANAG00000031254CPSF386100.000ENSCHOG00000000180CPSF370100.000Choloepus_hoffmanni
ENSANAG00000031254CPSF39989.805ENSCPBG00000014074CPSF39989.150Chrysemys_picta_bellii
ENSANAG00000031254CPSF39965.385ENSCING00000007214-9864.390Ciona_intestinalis
ENSANAG00000031254CPSF310079.681ENSCANG00000034435CPSF310079.681Colobus_angolensis_palliatus
ENSANAG00000031254CPSF310092.251ENSCGRG00001013134Cpsf310092.251Cricetulus_griseus_chok1gshd
ENSANAG00000031254CPSF310092.251ENSCGRG00000018319Cpsf310092.251Cricetulus_griseus_crigri
ENSANAG00000031254CPSF39982.036ENSCSEG00000002021CPSF39981.453Cynoglossus_semilaevis
ENSANAG00000031254CPSF39982.909ENSCVAG00000015067CPSF39882.500Cyprinodon_variegatus
ENSANAG00000031254CPSF39984.258ENSDARG00000027649cpsf39883.824Danio_rerio
ENSANAG00000031254CPSF310091.533ENSDNOG00000008940CPSF39591.533Dasypus_novemcinctus
ENSANAG00000031254CPSF39592.320ENSDORG00000014263Cpsf310092.320Dipodomys_ordii
ENSANAG00000031254CPSF39963.127FBgn0261065Cpsf739863.127Drosophila_melanogaster
ENSANAG00000031254CPSF39578.802ENSETEG00000003893CPSF310078.802Echinops_telfairi
ENSANAG00000031254CPSF39973.324ENSEBUG00000009018cpsf39873.209Eptatretus_burgeri
ENSANAG00000031254CPSF310092.836ENSEASG00005003970CPSF310092.836Equus_asinus_asinus
ENSANAG00000031254CPSF310092.836ENSECAG00000019911CPSF310092.836Equus_caballus
ENSANAG00000031254CPSF310079.971ENSEEUG00000015422CPSF310079.971Erinaceus_europaeus
ENSANAG00000031254CPSF39983.183ENSELUG00000013775cpsf39882.647Esox_lucius
ENSANAG00000031254CPSF310092.982ENSFCAG00000007852CPSF310093.199Felis_catus
ENSANAG00000031254CPSF39689.026ENSFALG00000006572CPSF310089.026Ficedula_albicollis
ENSANAG00000031254CPSF39991.291ENSFDAG00000006317CPSF39990.909Fukomys_damarensis
ENSANAG00000031254CPSF39980.816ENSFHEG00000014774cpsf39880.444Fundulus_heteroclitus
ENSANAG00000031254CPSF35960.000ENSFHEG00000012186CPSF39960.000Fundulus_heteroclitus
ENSANAG00000031254CPSF39981.859ENSGMOG00000003157cpsf39881.471Gadus_morhua
ENSANAG00000031254CPSF39989.072ENSGALG00000016424CPSF39988.693Gallus_gallus
ENSANAG00000031254CPSF39378.219ENSGAFG00000019449cpsf39978.219Gambusia_affinis
ENSANAG00000031254CPSF39983.033ENSGAFG00000008016CPSF39882.622Gambusia_affinis
ENSANAG00000031254CPSF36884.797ENSGAGG00000025583CPSF39384.797Gopherus_agassizii
ENSANAG00000031254CPSF310090.987ENSGGOG00000001757CPSF310093.386Gorilla_gorilla
ENSANAG00000031254CPSF39981.381ENSHBUG00000001188cpsf39980.764Haplochromis_burtoni
ENSANAG00000031254CPSF35972.840ENSHBUG00000014332CPSF39972.840Haplochromis_burtoni
ENSANAG00000031254CPSF310090.936ENSHGLG00000000666CPSF39990.936Heterocephalus_glaber_female
ENSANAG00000031254CPSF310090.936ENSHGLG00100007765CPSF39990.936Heterocephalus_glaber_male
ENSANAG00000031254CPSF39980.210ENSHCOG00000007251cpsf39979.765Hippocampus_comes
ENSANAG00000031254CPSF39981.859ENSHCOG00000015957CPSF39781.324Hippocampus_comes
ENSANAG00000031254CPSF39982.759ENSIPUG00000023488cpsf39882.353Ictalurus_punctatus
ENSANAG00000031254CPSF310092.251ENSSTOG00000004476CPSF310092.251Ictidomys_tridecemlineatus
ENSANAG00000031254CPSF310091.082ENSJJAG00000023415Cpsf310091.082Jaculus_jaculus
ENSANAG00000031254CPSF39982.609ENSKMAG00000007317CPSF39882.206Kryptolebias_marmoratus
ENSANAG00000031254CPSF39980.480ENSKMAG00000002806cpsf39880.000Kryptolebias_marmoratus
ENSANAG00000031254CPSF39583.051ENSLBEG00000013492CPSF39883.051Labrus_bergylta
ENSANAG00000031254CPSF39974.174ENSLBEG00000020569cpsf39473.971Labrus_bergylta
ENSANAG00000031254CPSF35471.314ENSLBEG00000015018-9971.314Labrus_bergylta
ENSANAG00000031254CPSF39981.089ENSLACG00000008308CPSF39881.089Latimeria_chalumnae
ENSANAG00000031254CPSF39984.731ENSLOCG00000016823cpsf39884.288Lepisosteus_oculatus
ENSANAG00000031254CPSF39992.804ENSLAFG00000009467CPSF310091.029Loxodonta_africana
ENSANAG00000031254CPSF310093.129ENSMFAG00000001339CPSF310093.129Macaca_fascicularis
ENSANAG00000031254CPSF39693.354ENSMMUG00000018038CPSF310093.354Macaca_mulatta
ENSANAG00000031254CPSF310080.409ENSMNEG00000039447CPSF310080.409Macaca_nemestrina
ENSANAG00000031254CPSF310093.275ENSMLEG00000026825CPSF310093.275Mandrillus_leucophaeus
ENSANAG00000031254CPSF39379.905ENSMAMG00000008835CPSF39979.905Mastacembelus_armatus
ENSANAG00000031254CPSF39980.781ENSMAMG00000003076cpsf39880.412Mastacembelus_armatus
ENSANAG00000031254CPSF39981.381ENSMZEG00005014358cpsf39980.764Maylandia_zebra
ENSANAG00000031254CPSF39983.208ENSMZEG00005006258CPSF39882.794Maylandia_zebra
ENSANAG00000031254CPSF39989.205ENSMGAG00000013995CPSF310089.205Meleagris_gallopavo
ENSANAG00000031254CPSF35486.170ENSMAUG00000000166Cpsf310086.170Mesocricetus_auratus
ENSANAG00000031254CPSF310089.217ENSMICG00000002363CPSF310089.217Microcebus_murinus
ENSANAG00000031254CPSF310087.719ENSMOCG00000020067Cpsf310087.719Microtus_ochrogaster
ENSANAG00000031254CPSF39579.595ENSMMOG00000018212CPSF39879.595Mola_mola
ENSANAG00000031254CPSF37577.857ENSMMOG00000011923CPSF38477.857Mola_mola
ENSANAG00000031254CPSF310089.725ENSMODG00000014703CPSF310089.725Monodelphis_domestica
ENSANAG00000031254CPSF39981.381ENSMALG00000016416cpsf39980.764Monopterus_albus
ENSANAG00000031254CPSF39478.594ENSMALG00000011474CPSF39978.594Monopterus_albus
ENSANAG00000031254CPSF310092.251MGP_CAROLIEiJ_G0017640Cpsf310092.251Mus_caroli
ENSANAG00000031254CPSF310092.251ENSMUSG00000054309Cpsf396100.000Mus_musculus
ENSANAG00000031254CPSF310092.251MGP_PahariEiJ_G0029397Cpsf310092.251Mus_pahari
ENSANAG00000031254CPSF310092.251MGP_SPRETEiJ_G0018481Cpsf310092.251Mus_spretus
ENSANAG00000031254CPSF310092.105ENSMPUG00000013213CPSF310092.105Mustela_putorius_furo
ENSANAG00000031254CPSF310091.971ENSMLUG00000010636CPSF310091.971Myotis_lucifugus
ENSANAG00000031254CPSF310092.251ENSNGAG00000019836Cpsf310092.251Nannospalax_galili
ENSANAG00000031254CPSF39380.794ENSNBRG00000010525CPSF39980.794Neolamprologus_brichardi
ENSANAG00000031254CPSF39980.931ENSNBRG00000004770cpsf39980.323Neolamprologus_brichardi
ENSANAG00000031254CPSF310093.129ENSNLEG00000013359CPSF310093.354Nomascus_leucogenys
ENSANAG00000031254CPSF310059.503ENSMEUG00000013117-10059.503Notamacropus_eugenii
ENSANAG00000031254CPSF310083.041ENSOPRG00000008902CPSF310083.041Ochotona_princeps
ENSANAG00000031254CPSF310090.643ENSODEG00000003129CPSF310090.643Octodon_degus
ENSANAG00000031254CPSF39981.532ENSONIG00000018812cpsf39980.910Oreochromis_niloticus
ENSANAG00000031254CPSF38389.184ENSOANG00000008577CPSF310089.184Ornithorhynchus_anatinus
ENSANAG00000031254CPSF310092.398ENSOCUG00000003728CPSF310092.398Oryctolagus_cuniculus
ENSANAG00000031254CPSF39979.279ENSORLG00000018854cpsf39978.708Oryzias_latipes
ENSANAG00000031254CPSF39979.279ENSORLG00020013331cpsf39978.708Oryzias_latipes_hni
ENSANAG00000031254CPSF39979.279ENSORLG00015011017cpsf39978.708Oryzias_latipes_hsok
ENSANAG00000031254CPSF39979.429ENSOMEG00000010647cpsf39478.855Oryzias_melastigma
ENSANAG00000031254CPSF310085.526ENSOGAG00000001680CPSF310085.526Otolemur_garnettii
ENSANAG00000031254CPSF310092.982ENSOARG00000015073CPSF310092.982Ovis_aries
ENSANAG00000031254CPSF310093.275ENSPPAG00000042457CPSF310093.275Pan_paniscus
ENSANAG00000031254CPSF310092.690ENSPPRG00000016790CPSF310092.890Panthera_pardus
ENSANAG00000031254CPSF39993.114ENSPTIG00000003920CPSF310092.756Panthera_tigris_altaica
ENSANAG00000031254CPSF310093.275ENSPTRG00000011638CPSF310093.275Pan_troglodytes
ENSANAG00000031254CPSF310092.982ENSPANG00000016798CPSF310092.982Papio_anubis
ENSANAG00000031254CPSF39984.985ENSPKIG00000023646cpsf39984.651Paramormyrops_kingsleyae
ENSANAG00000031254CPSF39988.606ENSPSIG00000016144CPSF310086.950Pelodiscus_sinensis
ENSANAG00000031254CPSF35971.111ENSPMGG00000015311CPSF39971.111Periophthalmus_magnuspinnatus
ENSANAG00000031254CPSF38181.703ENSPMGG00000006141-9979.058Periophthalmus_magnuspinnatus
ENSANAG00000031254CPSF310091.667ENSPEMG00000017668Cpsf310091.667Peromyscus_maniculatus_bairdii
ENSANAG00000031254CPSF37886.778ENSPMAG00000004841cpsf39986.778Petromyzon_marinus
ENSANAG00000031254CPSF39991.480ENSPCIG00000009823CPSF39991.480Phascolarctos_cinereus
ENSANAG00000031254CPSF39980.510ENSPFOG00000015922cpsf39979.912Poecilia_formosa
ENSANAG00000031254CPSF39982.583ENSPFOG00000010418-9882.327Poecilia_formosa
ENSANAG00000031254CPSF35972.525ENSPLAG00000021300-9972.525Poecilia_latipinna
ENSANAG00000031254CPSF39980.510ENSPLAG00000000882cpsf39979.912Poecilia_latipinna
ENSANAG00000031254CPSF39980.660ENSPMEG00000018309cpsf39980.059Poecilia_mexicana
ENSANAG00000031254CPSF39981.184ENSPREG00000004482CPSF39880.804Poecilia_reticulata
ENSANAG00000031254CPSF39477.516ENSPREG00000014875cpsf39977.516Poecilia_reticulata
ENSANAG00000031254CPSF310088.743ENSPPYG00000012666CPSF310088.743Pongo_abelii
ENSANAG00000031254CPSF38789.091ENSPCAG00000015042CPSF39089.091Procavia_capensis
ENSANAG00000031254CPSF38792.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSANAG00000031254CPSF39993.243ENSPVAG00000005324CPSF39992.815Pteropus_vampyrus
ENSANAG00000031254CPSF38085.083ENSPNYG00000021047CPSF39185.083Pundamilia_nyererei
ENSANAG00000031254CPSF39981.381ENSPNYG00000004405cpsf39980.764Pundamilia_nyererei
ENSANAG00000031254CPSF39983.358ENSPNAG00000023060cpsf39882.941Pygocentrus_nattereri
ENSANAG00000031254CPSF39992.643ENSRNOG00000052418Cpsf39992.229Rattus_norvegicus
ENSANAG00000031254CPSF310087.281ENSRBIG00000041615CPSF39988.872Rhinopithecus_bieti
ENSANAG00000031254CPSF310093.275ENSRROG00000033792CPSF310093.275Rhinopithecus_roxellana
ENSANAG00000031254CPSF39539.597YLR277CYSH19539.597Saccharomyces_cerevisiae
ENSANAG00000031254CPSF39989.121ENSSBOG00000027263CPSF310086.957Saimiri_boliviensis_boliviensis
ENSANAG00000031254CPSF310091.374ENSSHAG00000007024CPSF310091.374Sarcophilus_harrisii
ENSANAG00000031254CPSF39985.135ENSSFOG00015002108cpsf39984.435Scleropages_formosus
ENSANAG00000031254CPSF39581.846ENSSMAG00000020534CPSF39681.846Scophthalmus_maximus
ENSANAG00000031254CPSF39983.208ENSSDUG00000018498CPSF39882.794Seriola_dumerili
ENSANAG00000031254CPSF39981.231ENSSDUG00000002828cpsf39680.617Seriola_dumerili
ENSANAG00000031254CPSF39981.231ENSSLDG00000008469cpsf39680.617Seriola_lalandi_dorsalis
ENSANAG00000031254CPSF39983.208ENSSLDG00000005234CPSF39882.794Seriola_lalandi_dorsalis
ENSANAG00000031254CPSF39295.455ENSSARG00000005186CPSF39195.455Sorex_araneus
ENSANAG00000031254CPSF39986.438ENSSPUG00000015525CPSF39786.438Sphenodon_punctatus
ENSANAG00000031254CPSF39980.781ENSSPAG00000018579cpsf39880.560Stegastes_partitus
ENSANAG00000031254CPSF39982.759ENSSPAG00000002906CPSF39882.353Stegastes_partitus
ENSANAG00000031254CPSF39993.103ENSSSCG00000020799CPSF39992.679Sus_scrofa
ENSANAG00000031254CPSF39989.222ENSTGUG00000013016CPSF39988.840Taeniopygia_guttata
ENSANAG00000031254CPSF35967.246ENSTRUG00000013905CPSF39967.246Takifugu_rubripes
ENSANAG00000031254CPSF39980.480ENSTRUG00000007030cpsf39780.000Takifugu_rubripes
ENSANAG00000031254CPSF38893.699ENSTBEG00000002707CPSF38593.699Tupaia_belangeri
ENSANAG00000031254CPSF38884.946ENSTTRG00000000861CPSF38884.946Tursiops_truncatus
ENSANAG00000031254CPSF39990.090ENSUAMG00000007535CPSF39889.736Ursus_americanus
ENSANAG00000031254CPSF39693.045ENSUMAG00000003676CPSF310093.045Ursus_maritimus
ENSANAG00000031254CPSF39489.274ENSVPAG00000008041CPSF310089.274Vicugna_pacos
ENSANAG00000031254CPSF310092.836ENSVVUG00000002194CPSF310092.836Vulpes_vulpes
ENSANAG00000031254CPSF39985.135ENSXETG00000008263cpsf39884.728Xenopus_tropicalis
ENSANAG00000031254CPSF39980.810ENSXCOG00000019695cpsf39980.205Xiphophorus_couchianus
ENSANAG00000031254CPSF35470.350ENSXCOG00000000957-8770.350Xiphophorus_couchianus
ENSANAG00000031254CPSF39980.510ENSXMAG00000009784cpsf39979.912Xiphophorus_maculatus
ENSANAG00000031254CPSF39982.883ENSXMAG00000027291CPSF39882.474Xiphophorus_maculatus

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