EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000031489 (Gene tree)
Gene ID: 105704914
Gene Symbol: -
Alias: -
Full Name: U7 snRNA-associated Sm-like protein LSm10
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 369 bases
Position: chrKZ201547.1:84104-84472
Accession: 105704914
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000027298	LSM	PF01423.22	5.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000045301	-	369	XM_012434428	ENSANAP00000027298	122 (aa)	XP_012289851	A0A2K5E2D0

Gene Model

Click here to download ENSANAG00000031489's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000031489's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000031489	-	100	98.361	ENSANAG00000018759	-	99	98.361
ENSANAG00000031489	-	56	30.000	ENSANAG00000028372	LSM2	74	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000031489	-	100	95.902	ENSG00000181817	LSM10	99	95.902	Homo_sapiens
ENSANAG00000031489	-	98	90.000	ENSAMEG00000019854	LSM10	98	90.000	Ailuropoda_melanoleuca
ENSANAG00000031489	-	96	65.812	ENSACIG00000015420	oscp1a	77	65.812	Amphilophus_citrinellus
ENSANAG00000031489	-	91	64.865	ENSAOCG00000015607	LSM10	86	64.865	Amphiprion_ocellaris
ENSANAG00000031489	-	97	66.102	ENSAOCG00000015618	LSM10	98	66.102	Amphiprion_ocellaris
ENSANAG00000031489	-	97	66.102	ENSAOCG00000014654	-	98	66.102	Amphiprion_ocellaris
ENSANAG00000031489	-	97	66.102	ENSAPEG00000021845	-	98	66.102	Amphiprion_percula
ENSANAG00000031489	-	91	64.865	ENSAPEG00000021851	LSM10	86	64.865	Amphiprion_percula
ENSANAG00000031489	-	95	60.345	ENSATEG00000006310	oscp1a	86	60.345	Anabas_testudineus
ENSANAG00000031489	-	96	68.376	ENSACAG00000001231	LSM10	95	68.376	Anolis_carolinensis
ENSANAG00000031489	-	97	64.407	ENSACLG00000004728	oscp1a	96	64.407	Astatotilapia_calliptera
ENSANAG00000031489	-	98	63.025	ENSAMXG00000025301	oscp1a	98	63.025	Astyanax_mexicanus
ENSANAG00000031489	-	100	90.164	ENSBTAG00000024096	LSM10	100	90.164	Bos_taurus
ENSANAG00000031489	-	100	97.541	ENSCJAG00000044880	LSM10	99	97.541	Callithrix_jacchus
ENSANAG00000031489	-	98	91.667	ENSCAFG00000003382	LSM10	98	91.667	Canis_familiaris
ENSANAG00000031489	-	98	91.667	ENSCAFG00020008920	LSM10	98	91.667	Canis_lupus_dingo
ENSANAG00000031489	-	100	90.164	ENSCHIG00000009398	LSM10	100	90.164	Capra_hircus
ENSANAG00000031489	-	98	90.833	ENSCAPG00000012567	LSM10	98	90.833	Cavia_aperea
ENSANAG00000031489	-	98	90.833	ENSCPOG00000039302	LSM10	98	90.833	Cavia_porcellus
ENSANAG00000031489	-	100	95.902	ENSCCAG00000008378	-	99	95.902	Cebus_capucinus
ENSANAG00000031489	-	100	98.361	ENSCCAG00000018913	-	99	98.361	Cebus_capucinus
ENSANAG00000031489	-	99	96.694	ENSCATG00000006589	LSM10	98	96.694	Cercocebus_atys
ENSANAG00000031489	-	98	92.500	ENSCLAG00000008633	LSM10	98	92.500	Chinchilla_lanigera
ENSANAG00000031489	-	99	96.694	ENSCSAG00000000134	LSM10	98	96.694	Chlorocebus_sabaeus
ENSANAG00000031489	-	100	91.129	ENSCHOG00000008615	LSM10	99	91.129	Choloepus_hoffmanni
ENSANAG00000031489	-	84	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSANAG00000031489	-	99	96.694	ENSCANG00000019928	LSM10	98	96.694	Colobus_angolensis_palliatus
ENSANAG00000031489	-	98	90.000	ENSCGRG00001004317	-	98	90.000	Cricetulus_griseus_chok1gshd
ENSANAG00000031489	-	93	81.897	ENSCGRG00001022673	-	93	81.897	Cricetulus_griseus_chok1gshd
ENSANAG00000031489	-	93	81.897	ENSCGRG00000015514	-	93	81.897	Cricetulus_griseus_crigri
ENSANAG00000031489	-	98	90.000	ENSCGRG00000014935	-	98	90.000	Cricetulus_griseus_crigri
ENSANAG00000031489	-	98	60.000	ENSCSEG00000010374	oscp1a	81	60.000	Cynoglossus_semilaevis
ENSANAG00000031489	-	98	63.333	ENSCVAG00000001536	oscp1a	91	63.333	Cyprinodon_variegatus
ENSANAG00000031489	-	70	68.235	ENSDARG00000109563	CABZ01074453.1	99	68.235	Danio_rerio
ENSANAG00000031489	-	98	68.333	ENSDARG00000101222	oscp1a	99	68.333	Danio_rerio
ENSANAG00000031489	-	99	94.215	ENSDNOG00000036662	LSM10	98	94.215	Dasypus_novemcinctus
ENSANAG00000031489	-	98	90.833	ENSDORG00000007579	Lsm10	98	90.833	Dipodomys_ordii
ENSANAG00000031489	-	86	31.193	FBgn0033554	Lsm10	77	31.193	Drosophila_melanogaster
ENSANAG00000031489	-	98	87.500	ENSETEG00000005703	LSM10	98	87.500	Echinops_telfairi
ENSANAG00000031489	-	93	51.695	ENSEBUG00000001312	oscp1a	97	51.695	Eptatretus_burgeri
ENSANAG00000031489	-	98	91.667	ENSEASG00005012194	LSM10	98	91.667	Equus_asinus_asinus
ENSANAG00000031489	-	98	92.500	ENSECAG00000005071	LSM10	98	92.500	Equus_caballus
ENSANAG00000031489	-	98	90.000	ENSEEUG00000012032	LSM10	98	90.000	Erinaceus_europaeus
ENSANAG00000031489	-	100	65.574	ENSELUG00000007452	oscp1a	100	65.574	Esox_lucius
ENSANAG00000031489	-	96	71.795	ENSFALG00000000851	LSM10	95	71.795	Ficedula_albicollis
ENSANAG00000031489	-	98	89.167	ENSFDAG00000021056	LSM10	98	89.167	Fukomys_damarensis
ENSANAG00000031489	-	85	66.346	ENSFHEG00000001058	oscp1a	90	66.346	Fundulus_heteroclitus
ENSANAG00000031489	-	88	63.551	ENSGMOG00000019832	oscp1a	90	63.551	Gadus_morhua
ENSANAG00000031489	-	97	73.729	ENSGALG00000002127	LSM10	96	73.729	Gallus_gallus
ENSANAG00000031489	-	96	56.667	ENSGAFG00000016445	oscp1a	97	56.667	Gambusia_affinis
ENSANAG00000031489	-	97	61.017	ENSGACG00000002329	oscp1a	97	61.017	Gasterosteus_aculeatus
ENSANAG00000031489	-	98	73.109	ENSGAGG00000024848	LSM10	97	73.109	Gopherus_agassizii
ENSANAG00000031489	-	100	96.721	ENSGGOG00000003556	LSM10	99	96.721	Gorilla_gorilla
ENSANAG00000031489	-	97	64.407	ENSHBUG00000001722	oscp1a	96	64.407	Haplochromis_burtoni
ENSANAG00000031489	-	98	91.667	ENSHGLG00000011625	LSM10	98	91.667	Heterocephalus_glaber_female
ENSANAG00000031489	-	98	91.667	ENSHGLG00100001769	LSM10	98	91.667	Heterocephalus_glaber_male
ENSANAG00000031489	-	86	65.714	ENSIPUG00000005808	oscp1a	91	65.714	Ictalurus_punctatus
ENSANAG00000031489	-	98	90.833	ENSSTOG00000000606	LSM10	98	90.833	Ictidomys_tridecemlineatus
ENSANAG00000031489	-	97	61.864	ENSKMAG00000012143	oscp1a	98	61.864	Kryptolebias_marmoratus
ENSANAG00000031489	-	98	60.833	ENSLBEG00000017764	oscp1a	98	60.833	Labrus_bergylta
ENSANAG00000031489	-	98	75.630	ENSLACG00000015904	LSM10	92	75.630	Latimeria_chalumnae
ENSANAG00000031489	-	98	70.000	ENSLOCG00000018277	oscp1a	98	70.000	Lepisosteus_oculatus
ENSANAG00000031489	-	99	90.909	ENSLAFG00000009600	LSM10	98	90.909	Loxodonta_africana
ENSANAG00000031489	-	99	96.694	ENSMFAG00000009115	LSM10	98	96.694	Macaca_fascicularis
ENSANAG00000031489	-	99	96.694	ENSMMUG00000017338	LSM10	98	96.694	Macaca_mulatta
ENSANAG00000031489	-	99	96.694	ENSMNEG00000020023	LSM10	98	96.694	Macaca_nemestrina
ENSANAG00000031489	-	99	96.694	ENSMLEG00000025150	LSM10	98	96.694	Mandrillus_leucophaeus
ENSANAG00000031489	-	100	63.115	ENSMAMG00000004427	oscp1a	100	63.115	Mastacembelus_armatus
ENSANAG00000031489	-	97	64.407	ENSMZEG00005026307	oscp1a	96	64.407	Maylandia_zebra
ENSANAG00000031489	-	97	72.034	ENSMGAG00000015707	LSM10	96	72.034	Meleagris_gallopavo
ENSANAG00000031489	-	98	90.000	ENSMAUG00000016624	Lsm10	98	90.000	Mesocricetus_auratus
ENSANAG00000031489	-	98	90.000	ENSMOCG00000021943	Lsm10	98	90.000	Microtus_ochrogaster
ENSANAG00000031489	-	91	64.865	ENSMMOG00000013597	oscp1a	83	64.865	Mola_mola
ENSANAG00000031489	-	99	80.992	ENSMODG00000023328	LSM10	98	80.992	Monodelphis_domestica
ENSANAG00000031489	-	58	57.895	ENSMALG00000012661	oscp1a	60	57.895	Monopterus_albus
ENSANAG00000031489	-	98	89.167	MGP_CAROLIEiJ_G0026467	Lsm10	100	88.172	Mus_caroli
ENSANAG00000031489	-	98	90.000	ENSMUSG00000050188	Lsm10	100	89.247	Mus_musculus
ENSANAG00000031489	-	98	90.000	MGP_PahariEiJ_G0028798	Lsm10	100	89.247	Mus_pahari
ENSANAG00000031489	-	98	90.000	MGP_SPRETEiJ_G0027446	Lsm10	100	89.247	Mus_spretus
ENSANAG00000031489	-	98	91.667	ENSMPUG00000018593	LSM10	98	91.667	Mustela_putorius_furo
ENSANAG00000031489	-	98	88.333	ENSMLUG00000023895	LSM10	98	88.333	Myotis_lucifugus
ENSANAG00000031489	-	98	91.667	ENSNGAG00000015011	Lsm10	98	91.667	Nannospalax_galili
ENSANAG00000031489	-	97	65.254	ENSNBRG00000014306	oscp1a	96	65.254	Neolamprologus_brichardi
ENSANAG00000031489	-	100	95.902	ENSNLEG00000033754	LSM10	99	95.902	Nomascus_leucogenys
ENSANAG00000031489	-	99	80.992	ENSMEUG00000006313	LSM10	98	80.992	Notamacropus_eugenii
ENSANAG00000031489	-	98	90.833	ENSOPRG00000001699	LSM10	98	90.833	Ochotona_princeps
ENSANAG00000031489	-	98	92.500	ENSODEG00000019161	LSM10	98	92.500	Octodon_degus
ENSANAG00000031489	-	97	65.254	ENSONIG00000020904	oscp1a	97	65.254	Oreochromis_niloticus
ENSANAG00000031489	-	100	72.951	ENSOANG00000002066	LSM10	99	72.951	Ornithorhynchus_anatinus
ENSANAG00000031489	-	98	90.000	ENSOCUG00000005333	LSM10	98	90.000	Oryctolagus_cuniculus
ENSANAG00000031489	-	98	62.500	ENSORLG00000009504	oscp1a	99	62.500	Oryzias_latipes
ENSANAG00000031489	-	98	62.500	ENSORLG00020016201	oscp1a	99	62.500	Oryzias_latipes_hni
ENSANAG00000031489	-	90	66.364	ENSORLG00015007794	oscp1a	92	66.364	Oryzias_latipes_hsok
ENSANAG00000031489	-	98	90.000	ENSOGAG00000002653	LSM10	98	90.000	Otolemur_garnettii
ENSANAG00000031489	-	100	90.164	ENSOARG00000009596	LSM10	100	90.164	Ovis_aries
ENSANAG00000031489	-	100	95.902	ENSPPAG00000023465	LSM10	99	95.902	Pan_paniscus
ENSANAG00000031489	-	98	92.500	ENSPPRG00000014619	LSM10	98	92.500	Panthera_pardus
ENSANAG00000031489	-	98	92.500	ENSPTIG00000004613	LSM10	98	92.500	Panthera_tigris_altaica
ENSANAG00000031489	-	100	95.902	ENSPTRG00000000539	LSM10	99	95.902	Pan_troglodytes
ENSANAG00000031489	-	99	96.694	ENSPANG00000023172	LSM10	98	96.694	Papio_anubis
ENSANAG00000031489	-	98	65.000	ENSPKIG00000003728	oscp1a	97	65.000	Paramormyrops_kingsleyae
ENSANAG00000031489	-	98	71.429	ENSPSIG00000000590	LSM10	97	71.429	Pelodiscus_sinensis
ENSANAG00000031489	-	62	63.158	ENSPMGG00000015718	oscp1a	99	63.158	Periophthalmus_magnuspinnatus
ENSANAG00000031489	-	84	85.437	ENSPCIG00000014865	LSM10	76	85.437	Phascolarctos_cinereus
ENSANAG00000031489	-	92	64.286	ENSPFOG00000020490	oscp1a	95	64.286	Poecilia_formosa
ENSANAG00000031489	-	92	64.286	ENSPLAG00000016537	oscp1a	85	64.286	Poecilia_latipinna
ENSANAG00000031489	-	93	63.717	ENSPMEG00000000174	oscp1a	97	63.717	Poecilia_mexicana
ENSANAG00000031489	-	96	62.393	ENSPREG00000009899	oscp1a	89	62.393	Poecilia_reticulata
ENSANAG00000031489	-	100	96.721	ENSPPYG00000001539	LSM10	99	96.721	Pongo_abelii
ENSANAG00000031489	-	100	89.344	ENSPCAG00000002520	LSM10	99	89.344	Procavia_capensis
ENSANAG00000031489	-	98	90.000	ENSPVAG00000008644	LSM10	98	90.000	Pteropus_vampyrus
ENSANAG00000031489	-	97	64.407	ENSPNYG00000003138	oscp1a	96	64.407	Pundamilia_nyererei
ENSANAG00000031489	-	97	62.712	ENSPNAG00000028829	oscp1a	98	62.712	Pygocentrus_nattereri
ENSANAG00000031489	-	98	90.833	ENSRNOG00000025716	Lsm10	98	90.833	Rattus_norvegicus
ENSANAG00000031489	-	99	96.694	ENSRBIG00000001561	LSM10	98	96.694	Rhinopithecus_bieti
ENSANAG00000031489	-	99	96.694	ENSRROG00000011414	LSM10	98	96.694	Rhinopithecus_roxellana
ENSANAG00000031489	-	100	98.361	ENSSBOG00000036413	-	99	98.361	Saimiri_boliviensis_boliviensis
ENSANAG00000031489	-	99	80.165	ENSSHAG00000018056	LSM10	98	80.165	Sarcophilus_harrisii
ENSANAG00000031489	-	100	63.115	ENSSFOG00015019954	lsm10	100	63.115	Scleropages_formosus
ENSANAG00000031489	-	94	63.478	ENSSMAG00000001297	oscp1a	98	63.478	Scophthalmus_maximus
ENSANAG00000031489	-	100	61.789	ENSSDUG00000007090	oscp1a	100	61.789	Seriola_dumerili
ENSANAG00000031489	-	97	62.712	ENSSLDG00000000800	oscp1a	98	62.712	Seriola_lalandi_dorsalis
ENSANAG00000031489	-	98	87.705	ENSSARG00000004211	LSM10	98	89.344	Sorex_araneus
ENSANAG00000031489	-	95	63.793	ENSSPAG00000009229	oscp1a	96	63.793	Stegastes_partitus
ENSANAG00000031489	-	100	88.525	ENSSSCG00000038916	LSM10	99	88.525	Sus_scrofa
ENSANAG00000031489	-	97	72.034	ENSTGUG00000001602	-	97	72.034	Taeniopygia_guttata
ENSANAG00000031489	-	97	72.034	ENSTGUG00000001600	-	97	72.034	Taeniopygia_guttata
ENSANAG00000031489	-	98	63.333	ENSTRUG00000010531	oscp1a	97	63.333	Takifugu_rubripes
ENSANAG00000031489	-	100	93.443	ENSTBEG00000016674	LSM10	99	93.443	Tupaia_belangeri
ENSANAG00000031489	-	98	90.000	ENSUAMG00000020265	LSM10	98	90.000	Ursus_americanus
ENSANAG00000031489	-	99	89.256	ENSUMAG00000001438	LSM10	56	89.256	Ursus_maritimus
ENSANAG00000031489	-	98	91.667	ENSVVUG00000023209	LSM10	98	91.667	Vulpes_vulpes
ENSANAG00000031489	-	92	71.429	ENSXETG00000027631	lsm10	93	71.429	Xenopus_tropicalis
ENSANAG00000031489	-	98	59.167	ENSXCOG00000018776	oscp1a	75	59.167	Xiphophorus_couchianus
ENSANAG00000031489	-	93	61.947	ENSXMAG00000019963	oscp1a	90	61.947	Xiphophorus_maculatus