EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000031516 (Gene tree)
Gene ID: 105717838
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 195175 bases
Position: chrKZ206857.1:82743-277917
Accession: 105717838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000027433	R3H	PF01424.22	7.5e-05	1	1
ENSANAP00000027441	RNA_bind	PF08675.11	1.4e-33	1	1
ENSANAP00000027433	RNA_bind	PF08675.11	2.1e-33	1	1
ENSANAP00000027433	CAF1	PF04857.20	1.1e-88	1	1
ENSANAP00000027441	CAF1	PF04857.20	9.1e-52	1	2
ENSANAP00000027441	CAF1	PF04857.20	9.1e-52	2	2
ENSANAP00000027444	CAF1	PF04857.20	8.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000045447	PARN-202	1395	-	ENSANAP00000027441	464 (aa)	-	A0A2K5E2M1
ENSANAT00000045450	PARN-203	198	-	ENSANAP00000027444	65 (aa)	-	A0A2K5E2Q9
ENSANAT00000045439	PARN-201	3603	XM_012453223	ENSANAP00000027433	639 (aa)	XP_012308646	A0A2K5E2Q6

Gene Model

Click here to download ENSANAG00000031516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000031516's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000031516	PARN	100	100.000	ENSG00000140694	PARN	100	100.000	Homo_sapiens
ENSANAG00000031516	PARN	92	80.000	ENSAPOG00000019730	-	100	69.231	Acanthochromis_polyacanthus
ENSANAG00000031516	PARN	100	96.610	ENSAMEG00000011208	PARN	100	91.562	Ailuropoda_melanoleuca
ENSANAG00000031516	PARN	92	78.333	ENSACIG00000000619	parn	83	76.493	Amphilophus_citrinellus
ENSANAG00000031516	PARN	94	77.966	ENSAOCG00000003465	parn	84	73.604	Amphiprion_ocellaris
ENSANAG00000031516	PARN	74	78.436	ENSAPEG00000010661	parn	91	78.436	Amphiprion_percula
ENSANAG00000031516	PARN	91	76.271	ENSATEG00000004661	parn	83	74.829	Anabas_testudineus
ENSANAG00000031516	PARN	99	87.037	ENSAPLG00000013914	PARN	99	84.069	Anas_platyrhynchos
ENSANAG00000031516	PARN	100	89.831	ENSACAG00000004973	PARN	100	79.692	Anolis_carolinensis
ENSANAG00000031516	PARN	94	77.966	ENSACLG00000004742	parn	85	73.862	Astatotilapia_calliptera
ENSANAG00000031516	PARN	91	79.661	ENSAMXG00000012390	parn	92	72.870	Astyanax_mexicanus
ENSANAG00000031516	PARN	100	98.305	ENSBTAG00000018097	PARN	100	92.042	Bos_taurus
ENSANAG00000031516	PARN	100	100.000	ENSCJAG00000015866	PARN	100	100.000	Callithrix_jacchus
ENSANAG00000031516	PARN	100	94.915	ENSCAFG00000018795	PARN	100	91.706	Canis_familiaris
ENSANAG00000031516	PARN	100	96.610	ENSCAFG00020024126	PARN	100	91.706	Canis_lupus_dingo
ENSANAG00000031516	PARN	100	98.305	ENSCHIG00000018143	PARN	100	92.645	Capra_hircus
ENSANAG00000031516	PARN	60	77.500	ENSCAPG00000007984	PARN	78	63.147	Cavia_aperea
ENSANAG00000031516	PARN	100	98.305	ENSCPOG00000002263	PARN	100	89.828	Cavia_porcellus
ENSANAG00000031516	PARN	100	100.000	ENSCCAG00000030367	PARN	100	100.000	Cebus_capucinus
ENSANAG00000031516	PARN	91	100.000	ENSCATG00000041368	PARN	100	100.000	Cercocebus_atys
ENSANAG00000031516	PARN	100	96.610	ENSCLAG00000015406	PARN	99	89.984	Chinchilla_lanigera
ENSANAG00000031516	PARN	100	100.000	ENSCSAG00000008142	PARN	100	97.340	Chlorocebus_sabaeus
ENSANAG00000031516	PARN	98	98.077	ENSCHOG00000007014	PARN	100	75.633	Choloepus_hoffmanni
ENSANAG00000031516	PARN	88	84.492	ENSCPBG00000006609	PARN	97	84.730	Chrysemys_picta_bellii
ENSANAG00000031516	PARN	88	47.368	ENSCING00000010142	-	99	43.797	Ciona_intestinalis
ENSANAG00000031516	PARN	91	100.000	ENSCANG00000023734	-	100	85.455	Colobus_angolensis_palliatus
ENSANAG00000031516	PARN	100	100.000	ENSCANG00000028849	-	100	100.000	Colobus_angolensis_palliatus
ENSANAG00000031516	PARN	100	96.610	ENSCGRG00001012096	Parn	100	84.735	Cricetulus_griseus_chok1gshd
ENSANAG00000031516	PARN	100	96.610	ENSCGRG00000004939	Parn	100	84.735	Cricetulus_griseus_crigri
ENSANAG00000031516	PARN	94	79.661	ENSCSEG00000002064	parn	100	64.706	Cynoglossus_semilaevis
ENSANAG00000031516	PARN	91	77.966	ENSCVAG00000014848	parn	83	73.630	Cyprinodon_variegatus
ENSANAG00000031516	PARN	100	71.186	ENSDARG00000102634	parn	100	64.286	Danio_rerio
ENSANAG00000031516	PARN	100	98.305	ENSDNOG00000000833	PARN	100	91.706	Dasypus_novemcinctus
ENSANAG00000031516	PARN	91	96.610	ENSDORG00000027812	-	100	87.273	Dipodomys_ordii
ENSANAG00000031516	PARN	92	95.000	ENSETEG00000014828	-	78	93.536	Echinops_telfairi
ENSANAG00000031516	PARN	100	98.305	ENSEASG00005011400	PARN	100	92.332	Equus_asinus_asinus
ENSANAG00000031516	PARN	100	96.610	ENSECAG00000017792	PARN	100	91.862	Equus_caballus
ENSANAG00000031516	PARN	92	96.667	ENSEEUG00000010370	PARN	86	83.258	Erinaceus_europaeus
ENSANAG00000031516	PARN	91	79.661	ENSELUG00000013139	parn	77	72.250	Esox_lucius
ENSANAG00000031516	PARN	100	96.610	ENSFCAG00000044961	PARN	100	96.610	Felis_catus
ENSANAG00000031516	PARN	58	30.105	ENSFALG00000012081	PNLDC1	70	30.585	Ficedula_albicollis
ENSANAG00000031516	PARN	98	88.462	ENSFALG00000003911	PARN	98	82.753	Ficedula_albicollis
ENSANAG00000031516	PARN	100	98.305	ENSFDAG00000009234	PARN	100	89.202	Fukomys_damarensis
ENSANAG00000031516	PARN	98	71.875	ENSFHEG00000013738	parn	100	71.875	Fundulus_heteroclitus
ENSANAG00000031516	PARN	91	77.966	ENSGMOG00000003231	parn	97	77.052	Gadus_morhua
ENSANAG00000031516	PARN	100	91.525	ENSGALG00000003091	PARN	100	82.115	Gallus_gallus
ENSANAG00000031516	PARN	91	79.661	ENSGAFG00000011061	parn	84	72.987	Gambusia_affinis
ENSANAG00000031516	PARN	100	68.315	ENSGACG00000019501	parn	100	68.934	Gasterosteus_aculeatus
ENSANAG00000031516	PARN	70	78.528	ENSGAGG00000023281	PARN	83	78.528	Gopherus_agassizii
ENSANAG00000031516	PARN	100	100.000	ENSGGOG00000025224	PARN	100	100.000	Gorilla_gorilla
ENSANAG00000031516	PARN	94	77.966	ENSHBUG00000017906	parn	90	77.095	Haplochromis_burtoni
ENSANAG00000031516	PARN	100	98.305	ENSHGLG00000010886	PARN	100	89.358	Heterocephalus_glaber_female
ENSANAG00000031516	PARN	100	98.305	ENSHGLG00100014659	PARN	100	89.358	Heterocephalus_glaber_male
ENSANAG00000031516	PARN	80	84.615	ENSHCOG00000008683	parn	91	73.724	Hippocampus_comes
ENSANAG00000031516	PARN	100	69.492	ENSIPUG00000012401	parn	84	62.892	Ictalurus_punctatus
ENSANAG00000031516	PARN	100	96.610	ENSSTOG00000007519	PARN	100	90.610	Ictidomys_tridecemlineatus
ENSANAG00000031516	PARN	100	98.305	ENSJJAG00000023049	Parn	100	87.324	Jaculus_jaculus
ENSANAG00000031516	PARN	94	76.271	ENSKMAG00000009462	parn	84	73.891	Kryptolebias_marmoratus
ENSANAG00000031516	PARN	91	77.966	ENSLBEG00000009167	parn	90	72.835	Labrus_bergylta
ENSANAG00000031516	PARN	79	78.571	ENSLACG00000004207	PARN	100	77.358	Latimeria_chalumnae
ENSANAG00000031516	PARN	96	81.356	ENSLOCG00000000715	parn	87	74.422	Lepisosteus_oculatus
ENSANAG00000031516	PARN	100	98.305	ENSLAFG00000015036	PARN	100	92.488	Loxodonta_africana
ENSANAG00000031516	PARN	100	100.000	ENSMFAG00000044852	PARN	100	100.000	Macaca_fascicularis
ENSANAG00000031516	PARN	100	100.000	ENSMMUG00000018849	PARN	100	100.000	Macaca_mulatta
ENSANAG00000031516	PARN	100	100.000	ENSMNEG00000045108	PARN	100	100.000	Macaca_nemestrina
ENSANAG00000031516	PARN	100	100.000	ENSMLEG00000031743	PARN	100	100.000	Mandrillus_leucophaeus
ENSANAG00000031516	PARN	91	77.966	ENSMAMG00000006939	parn	84	72.529	Mastacembelus_armatus
ENSANAG00000031516	PARN	94	77.966	ENSMZEG00005013590	parn	90	77.052	Maylandia_zebra
ENSANAG00000031516	PARN	94	100.000	ENSMGAG00000001004	PARN	95	82.219	Meleagris_gallopavo
ENSANAG00000031516	PARN	95	94.286	ENSMAUG00000008025	Parn	100	79.077	Mesocricetus_auratus
ENSANAG00000031516	PARN	100	98.462	ENSMICG00000016053	PARN	100	98.462	Microcebus_murinus
ENSANAG00000031516	PARN	91	94.915	ENSMOCG00000022211	Parn	100	90.688	Microtus_ochrogaster
ENSANAG00000031516	PARN	91	79.661	ENSMMOG00000011333	parn	87	76.449	Mola_mola
ENSANAG00000031516	PARN	92	90.000	ENSMODG00000004915	PARN	99	93.548	Monodelphis_domestica
ENSANAG00000031516	PARN	91	76.667	ENSMALG00000019426	parn	91	78.957	Monopterus_albus
ENSANAG00000031516	PARN	100	94.915	MGP_CAROLIEiJ_G0020466	Parn	100	85.446	Mus_caroli
ENSANAG00000031516	PARN	100	93.220	ENSMUSG00000022685	Parn	100	92.683	Mus_musculus
ENSANAG00000031516	PARN	100	96.610	MGP_PahariEiJ_G0016172	Parn	100	85.290	Mus_pahari
ENSANAG00000031516	PARN	100	94.915	MGP_SPRETEiJ_G0021361	Parn	100	85.446	Mus_spretus
ENSANAG00000031516	PARN	100	98.305	ENSMPUG00000014464	PARN	100	92.175	Mustela_putorius_furo
ENSANAG00000031516	PARN	91	94.915	ENSMLUG00000005414	PARN	100	93.927	Myotis_lucifugus
ENSANAG00000031516	PARN	91	98.305	ENSNGAG00000024082	-	100	87.727	Nannospalax_galili
ENSANAG00000031516	PARN	91	77.966	ENSNBRG00000006805	parn	90	76.723	Neolamprologus_brichardi
ENSANAG00000031516	PARN	100	100.000	ENSNLEG00000010241	PARN	100	100.000	Nomascus_leucogenys
ENSANAG00000031516	PARN	93	92.308	ENSMEUG00000008178	-	68	92.308	Notamacropus_eugenii
ENSANAG00000031516	PARN	98	98.077	ENSOPRG00000012187	PARN	100	84.810	Ochotona_princeps
ENSANAG00000031516	PARN	100	98.305	ENSODEG00000001617	PARN	100	81.308	Octodon_degus
ENSANAG00000031516	PARN	100	77.966	ENSONIG00000000151	parn	100	69.385	Oreochromis_niloticus
ENSANAG00000031516	PARN	82	82.152	ENSOANG00000020155	-	97	82.677	Ornithorhynchus_anatinus
ENSANAG00000031516	PARN	99	91.071	ENSOCUG00000000322	PARN	100	90.409	Oryctolagus_cuniculus
ENSANAG00000031516	PARN	100	76.923	ENSORLG00000024893	-	100	68.778	Oryzias_latipes
ENSANAG00000031516	PARN	91	79.661	ENSORLG00020010313	parn	86	72.881	Oryzias_latipes_hni
ENSANAG00000031516	PARN	91	79.661	ENSORLG00015000300	parn	86	72.712	Oryzias_latipes_hsok
ENSANAG00000031516	PARN	91	79.661	ENSOMEG00000019555	parn	97	68.326	Oryzias_melastigma
ENSANAG00000031516	PARN	92	98.333	ENSOGAG00000014626	PARN	100	93.535	Otolemur_garnettii
ENSANAG00000031516	PARN	91	98.305	ENSOARG00000007574	PARN	100	96.964	Ovis_aries
ENSANAG00000031516	PARN	100	100.000	ENSPPAG00000031438	PARN	100	100.000	Pan_paniscus
ENSANAG00000031516	PARN	100	96.610	ENSPPRG00000018583	PARN	100	96.610	Panthera_pardus
ENSANAG00000031516	PARN	100	96.610	ENSPTIG00000012135	PARN	100	96.610	Panthera_tigris_altaica
ENSANAG00000031516	PARN	100	100.000	ENSPTRG00000007792	PARN	100	100.000	Pan_troglodytes
ENSANAG00000031516	PARN	100	100.000	ENSPANG00000020099	PARN	100	100.000	Papio_anubis
ENSANAG00000031516	PARN	96	79.661	ENSPKIG00000022807	parn	91	70.408	Paramormyrops_kingsleyae
ENSANAG00000031516	PARN	98	89.831	ENSPSIG00000014804	PARN	100	82.526	Pelodiscus_sinensis
ENSANAG00000031516	PARN	91	76.271	ENSPMGG00000014431	parn	75	74.954	Periophthalmus_magnuspinnatus
ENSANAG00000031516	PARN	100	94.915	ENSPEMG00000018439	Parn	100	82.473	Peromyscus_maniculatus_bairdii
ENSANAG00000031516	PARN	81	67.692	ENSPMAG00000003956	parn	99	67.692	Petromyzon_marinus
ENSANAG00000031516	PARN	100	92.308	ENSPCIG00000001259	PARN	100	92.308	Phascolarctos_cinereus
ENSANAG00000031516	PARN	91	79.661	ENSPFOG00000012823	parn	84	72.559	Poecilia_formosa
ENSANAG00000031516	PARN	91	79.661	ENSPLAG00000006395	parn	84	72.727	Poecilia_latipinna
ENSANAG00000031516	PARN	91	79.661	ENSPMEG00000007711	parn	84	72.896	Poecilia_mexicana
ENSANAG00000031516	PARN	91	79.661	ENSPREG00000000147	parn	84	72.559	Poecilia_reticulata
ENSANAG00000031516	PARN	100	98.305	ENSPPYG00000007123	PARN	100	96.256	Pongo_abelii
ENSANAG00000031516	PARN	93	96.154	ENSPCAG00000001741	PARN	100	82.013	Procavia_capensis
ENSANAG00000031516	PARN	100	98.462	ENSPCOG00000019292	PARN	100	98.462	Propithecus_coquereli
ENSANAG00000031516	PARN	98	98.077	ENSPVAG00000002547	PARN	100	88.449	Pteropus_vampyrus
ENSANAG00000031516	PARN	91	77.966	ENSPNYG00000006835	parn	90	74.115	Pundamilia_nyererei
ENSANAG00000031516	PARN	84	72.998	ENSPNAG00000018905	parn	86	72.998	Pygocentrus_nattereri
ENSANAG00000031516	PARN	100	93.220	ENSRNOG00000002912	Parn	98	88.889	Rattus_norvegicus
ENSANAG00000031516	PARN	72	96.396	ENSRBIG00000018726	PARN	100	96.396	Rhinopithecus_bieti
ENSANAG00000031516	PARN	92	98.333	ENSRROG00000020116	-	86	98.361	Rhinopithecus_roxellana
ENSANAG00000031516	PARN	72	96.396	ENSRROG00000011162	-	100	96.396	Rhinopithecus_roxellana
ENSANAG00000031516	PARN	100	100.000	ENSSBOG00000034726	PARN	100	100.000	Saimiri_boliviensis_boliviensis
ENSANAG00000031516	PARN	83	88.889	ENSSHAG00000008493	PARN	94	92.823	Sarcophilus_harrisii
ENSANAG00000031516	PARN	94	79.661	ENSSFOG00015014165	parn	96	72.315	Scleropages_formosus
ENSANAG00000031516	PARN	91	76.271	ENSSMAG00000000685	parn	100	63.150	Scophthalmus_maximus
ENSANAG00000031516	PARN	94	76.271	ENSSDUG00000014555	parn	83	73.549	Seriola_dumerili
ENSANAG00000031516	PARN	91	76.271	ENSSLDG00000007603	-	100	64.253	Seriola_lalandi_dorsalis
ENSANAG00000031516	PARN	91	80.000	ENSSARG00000014339	PARN	100	80.000	Sorex_araneus
ENSANAG00000031516	PARN	100	89.831	ENSSPUG00000007719	PARN	100	84.351	Sphenodon_punctatus
ENSANAG00000031516	PARN	91	77.966	ENSSPAG00000007095	parn	86	75.094	Stegastes_partitus
ENSANAG00000031516	PARN	100	98.305	ENSSSCG00000007878	PARN	89	92.175	Sus_scrofa
ENSANAG00000031516	PARN	55	30.833	ENSTGUG00000011418	PNLDC1	68	30.833	Taeniopygia_guttata
ENSANAG00000031516	PARN	99	87.037	ENSTGUG00000004971	PARN	99	82.650	Taeniopygia_guttata
ENSANAG00000031516	PARN	100	71.212	ENSTRUG00000015208	-	94	71.212	Takifugu_rubripes
ENSANAG00000031516	PARN	100	79.661	ENSTNIG00000008252	parn	100	69.397	Tetraodon_nigroviridis
ENSANAG00000031516	PARN	91	78.966	ENSTBEG00000010407	PARN	100	78.966	Tupaia_belangeri
ENSANAG00000031516	PARN	98	98.077	ENSTTRG00000002843	PARN	100	87.500	Tursiops_truncatus
ENSANAG00000031516	PARN	68	83.486	ENSUAMG00000008283	PARN	90	83.486	Ursus_americanus
ENSANAG00000031516	PARN	100	98.305	ENSUMAG00000004527	PARN	100	92.019	Ursus_maritimus
ENSANAG00000031516	PARN	95	98.077	ENSVPAG00000008968	PARN	100	88.925	Vicugna_pacos
ENSANAG00000031516	PARN	100	96.610	ENSVVUG00000019509	PARN	100	92.488	Vulpes_vulpes
ENSANAG00000031516	PARN	100	81.967	ENSXETG00000010994	parn	100	82.700	Xenopus_tropicalis
ENSANAG00000031516	PARN	91	79.661	ENSXCOG00000015990	parn	96	69.374	Xiphophorus_couchianus
ENSANAG00000031516	PARN	94	79.661	ENSXMAG00000014783	parn	84	73.232	Xiphophorus_maculatus