EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000031959 (Gene tree)
Gene ID: 105727550
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 16685 bases
Position: chrKZ208238.1:14599771-14616455
Accession: 105727550
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000028231	RRM_1	PF00076.22	1.9e-18	1	1
ENSANAP00000028245	RRM_1	PF00076.22	4.4e-18	1	1
ENSANAP00000028232	RRM_1	PF00076.22	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000046257	RBM38-202	264	-	ENSANAP00000028232	87 (aa)	-	A0A2K5E4T3
ENSANAT00000046256	RBM38-201	366	XM_021669108	ENSANAP00000028231	121 (aa)	XP_021524783	A0A2K5E4V6
ENSANAT00000046270	RBM38-203	2465	XM_021669106	ENSANAP00000028245	216 (aa)	XP_021524781	A0A2K5E4R1

Gene Model

Click here to download ENSANAG00000031959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000031959's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000031959	RBM38	72	38.636	ENSANAG00000027805	-	66	36.364
ENSANAG00000031959	RBM38	62	42.105	ENSANAG00000028883	-	69	43.548
ENSANAG00000031959	RBM38	81	91.837	ENSANAG00000029310	RBM24	100	68.067
ENSANAG00000031959	RBM38	67	37.333	ENSANAG00000017086	HNRNPA0	51	37.333
ENSANAG00000031959	RBM38	74	42.857	ENSANAG00000033016	HNRNPA2B1	58	42.857
ENSANAG00000031959	RBM38	71	34.177	ENSANAG00000026991	HNRNPAB	54	34.177
ENSANAG00000031959	RBM38	66	38.750	ENSANAG00000028483	-	81	38.750
ENSANAG00000031959	RBM38	76	30.667	ENSANAG00000035355	-	59	30.667
ENSANAG00000031959	RBM38	64	44.118	ENSANAG00000023645	-	55	44.118
ENSANAG00000031959	RBM38	89	40.260	ENSANAG00000037827	MSI2	61	40.260
ENSANAG00000031959	RBM38	72	42.045	ENSANAG00000036495	-	52	41.304
ENSANAG00000031959	RBM38	62	39.474	ENSANAG00000037179	-	83	40.580
ENSANAG00000031959	RBM38	63	42.373	ENSANAG00000027151	MSI1	80	36.842
ENSANAG00000031959	RBM38	74	42.857	ENSANAG00000020524	-	54	40.000
ENSANAG00000031959	RBM38	74	37.500	ENSANAG00000027901	-	79	33.766
ENSANAG00000031959	RBM38	62	39.474	ENSANAG00000028304	RBMX	79	41.935
ENSANAG00000031959	RBM38	71	32.911	ENSANAG00000026572	-	56	32.911

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000031959	RBM38	100	99.174	ENSG00000132819	RBM38	100	99.174	Homo_sapiens
ENSANAG00000031959	RBM38	81	85.859	ENSAPOG00000003301	rbm38	93	59.072	Acanthochromis_polyacanthus
ENSANAG00000031959	RBM38	82	90.099	ENSAPOG00000009939	-	94	68.018	Acanthochromis_polyacanthus
ENSANAG00000031959	RBM38	81	92.929	ENSACIG00000012502	-	100	88.889	Amphilophus_citrinellus
ENSANAG00000031959	RBM38	81	85.859	ENSACIG00000000010	rbm38	93	57.143	Amphilophus_citrinellus
ENSANAG00000031959	RBM38	81	85.859	ENSAOCG00000013497	-	93	59.072	Amphiprion_ocellaris
ENSANAG00000031959	RBM38	100	79.675	ENSAOCG00000012559	RBM38	90	67.873	Amphiprion_ocellaris
ENSANAG00000031959	RBM38	99	76.423	ENSAPEG00000013137	rbm38	93	59.072	Amphiprion_percula
ENSANAG00000031959	RBM38	82	90.099	ENSAPEG00000023581	-	95	65.966	Amphiprion_percula
ENSANAG00000031959	RBM38	81	84.848	ENSATEG00000016366	rbm38	94	61.161	Anabas_testudineus
ENSANAG00000031959	RBM38	78	93.617	ENSATEG00000016710	-	92	67.241	Anabas_testudineus
ENSANAG00000031959	RBM38	100	78.082	ENSACAG00000016238	RBM38	90	78.082	Anolis_carolinensis
ENSANAG00000031959	RBM38	78	94.681	ENSACLG00000019514	-	92	67.672	Astatotilapia_calliptera
ENSANAG00000031959	RBM38	78	86.170	ENSAMXG00000038120	rbm38	76	65.405	Astyanax_mexicanus
ENSANAG00000031959	RBM38	82	91.089	ENSAMXG00000015601	-	94	67.686	Astyanax_mexicanus
ENSANAG00000031959	RBM38	100	98.347	ENSBTAG00000008105	RBM38	90	95.370	Bos_taurus
ENSANAG00000031959	RBM38	74	85.393	WBGene00006321	sup-12	59	85.393	Caenorhabditis_elegans
ENSANAG00000031959	RBM38	100	100.000	ENSCJAG00000019139	RBM38	100	100.000	Callithrix_jacchus
ENSANAG00000031959	RBM38	100	99.174	ENSCAFG00020021943	RBM38	90	95.370	Canis_lupus_dingo
ENSANAG00000031959	RBM38	100	97.521	ENSCHIG00000002609	RBM38	90	93.981	Capra_hircus
ENSANAG00000031959	RBM38	100	100.000	ENSCPOG00000012781	RBM38	90	94.907	Cavia_porcellus
ENSANAG00000031959	RBM38	100	100.000	ENSCCAG00000036872	RBM38	100	100.000	Cebus_capucinus
ENSANAG00000031959	RBM38	100	100.000	ENSCATG00000032133	RBM38	100	100.000	Cercocebus_atys
ENSANAG00000031959	RBM38	100	95.833	ENSCLAG00000005906	RBM38	94	95.833	Chinchilla_lanigera
ENSANAG00000031959	RBM38	100	100.000	ENSCSAG00000015503	RBM38	90	97.685	Chlorocebus_sabaeus
ENSANAG00000031959	RBM38	100	81.193	ENSCPBG00000024059	RBM38	100	81.193	Chrysemys_picta_bellii
ENSANAG00000031959	RBM38	80	84.536	ENSCING00000025102	-	86	55.556	Ciona_intestinalis
ENSANAG00000031959	RBM38	80	84.536	ENSCSAVG00000001132	-	76	56.585	Ciona_savignyi
ENSANAG00000031959	RBM38	99	80.833	ENSCANG00000030105	-	79	73.611	Colobus_angolensis_palliatus
ENSANAG00000031959	RBM38	100	95.868	ENSCGRG00001012928	Rbm38	91	94.444	Cricetulus_griseus_chok1gshd
ENSANAG00000031959	RBM38	79	82.292	ENSCSEG00000020943	rbm38	60	61.957	Cynoglossus_semilaevis
ENSANAG00000031959	RBM38	78	93.617	ENSCSEG00000004701	-	93	72.727	Cynoglossus_semilaevis
ENSANAG00000031959	RBM38	78	95.745	ENSCVAG00000005472	-	92	67.660	Cyprinodon_variegatus
ENSANAG00000031959	RBM38	76	91.304	ENSCVAG00000015952	rbm38	91	59.227	Cyprinodon_variegatus
ENSANAG00000031959	RBM38	78	92.553	ENSDARG00000058818	rbm38	92	64.574	Danio_rerio
ENSANAG00000031959	RBM38	100	89.352	ENSDNOG00000032004	RBM38	100	89.352	Dasypus_novemcinctus
ENSANAG00000031959	RBM38	88	85.047	ENSEBUG00000015164	rbm38	83	68.613	Eptatretus_burgeri
ENSANAG00000031959	RBM38	100	98.347	ENSECAG00000007700	RBM38	90	94.444	Equus_caballus
ENSANAG00000031959	RBM38	100	95.041	ENSEEUG00000013489	RBM38	91	93.548	Erinaceus_europaeus
ENSANAG00000031959	RBM38	81	88.889	ENSELUG00000000585	-	87	65.672	Esox_lucius
ENSANAG00000031959	RBM38	81	89.000	ENSELUG00000005849	-	95	67.089	Esox_lucius
ENSANAG00000031959	RBM38	100	98.347	ENSFCAG00000042916	RBM38	100	98.347	Felis_catus
ENSANAG00000031959	RBM38	85	93.204	ENSFALG00000010805	RBM38	90	84.971	Ficedula_albicollis
ENSANAG00000031959	RBM38	78	95.745	ENSFHEG00000006160	-	92	71.759	Fundulus_heteroclitus
ENSANAG00000031959	RBM38	77	91.398	ENSFHEG00000017748	rbm38	91	57.511	Fundulus_heteroclitus
ENSANAG00000031959	RBM38	78	93.617	ENSGMOG00000016655	-	96	75.275	Gadus_morhua
ENSANAG00000031959	RBM38	100	79.358	ENSGALG00000026081	RBM38	100	79.358	Gallus_gallus
ENSANAG00000031959	RBM38	81	88.000	ENSGACG00000009873	-	100	68.444	Gasterosteus_aculeatus
ENSANAG00000031959	RBM38	80	85.714	ENSGACG00000015224	rbm38	98	63.679	Gasterosteus_aculeatus
ENSANAG00000031959	RBM38	100	81.651	ENSGAGG00000001187	RBM38	100	81.651	Gopherus_agassizii
ENSANAG00000031959	RBM38	78	94.681	ENSHBUG00000011778	-	92	71.689	Haplochromis_burtoni
ENSANAG00000031959	RBM38	81	84.848	ENSHBUG00000012058	rbm38	92	61.333	Haplochromis_burtoni
ENSANAG00000031959	RBM38	100	98.347	ENSHGLG00000015077	RBM38	90	92.130	Heterocephalus_glaber_female
ENSANAG00000031959	RBM38	82	89.109	ENSHCOG00000005622	-	52	75.135	Hippocampus_comes
ENSANAG00000031959	RBM38	74	85.556	ENSHCOG00000019040	rbm38	82	57.653	Hippocampus_comes
ENSANAG00000031959	RBM38	82	91.089	ENSIPUG00000019349	-	94	65.801	Ictalurus_punctatus
ENSANAG00000031959	RBM38	83	97.222	ENSJJAG00000016299	-	90	97.222	Jaculus_jaculus
ENSANAG00000031959	RBM38	74	86.517	ENSKMAG00000012402	rbm38	98	55.085	Kryptolebias_marmoratus
ENSANAG00000031959	RBM38	81	85.859	ENSLBEG00000018878	rbm38	91	58.798	Labrus_bergylta
ENSANAG00000031959	RBM38	78	93.617	ENSLBEG00000016163	RBM38	92	71.233	Labrus_bergylta
ENSANAG00000031959	RBM38	82	91.000	ENSLOCG00000003456	rbm38	94	71.875	Lepisosteus_oculatus
ENSANAG00000031959	RBM38	100	97.685	ENSMFAG00000043808	RBM38	97	100.000	Macaca_fascicularis
ENSANAG00000031959	RBM38	100	100.000	ENSMMUG00000031391	RBM38	100	100.000	Macaca_mulatta
ENSANAG00000031959	RBM38	100	100.000	ENSMNEG00000034683	RBM38	100	100.000	Macaca_nemestrina
ENSANAG00000031959	RBM38	77	81.720	ENSMLEG00000043261	-	88	84.404	Mandrillus_leucophaeus
ENSANAG00000031959	RBM38	81	84.848	ENSMAMG00000024135	rbm38	93	59.244	Mastacembelus_armatus
ENSANAG00000031959	RBM38	82	90.099	ENSMAMG00000020499	RBM38	95	66.667	Mastacembelus_armatus
ENSANAG00000031959	RBM38	81	84.848	ENSMZEG00005026036	rbm38	93	57.143	Maylandia_zebra
ENSANAG00000031959	RBM38	78	94.681	ENSMZEG00005000849	-	92	71.689	Maylandia_zebra
ENSANAG00000031959	RBM38	100	95.868	ENSMAUG00000021211	Rbm38	91	93.981	Mesocricetus_auratus
ENSANAG00000031959	RBM38	100	97.222	ENSMICG00000038011	RBM38	100	97.222	Microcebus_murinus
ENSANAG00000031959	RBM38	100	94.444	ENSMOCG00000008715	Rbm38	91	94.444	Microtus_ochrogaster
ENSANAG00000031959	RBM38	96	82.759	ENSMMOG00000020051	-	90	71.296	Mola_mola
ENSANAG00000031959	RBM38	100	88.430	ENSMODG00000016458	RBM38	92	81.193	Monodelphis_domestica
ENSANAG00000031959	RBM38	82	90.099	ENSMALG00000004680	RBM38	67	76.374	Monopterus_albus
ENSANAG00000031959	RBM38	81	81.633	ENSMALG00000022327	rbm38	93	56.637	Monopterus_albus
ENSANAG00000031959	RBM38	100	94.907	MGP_CAROLIEiJ_G0024745	Rbm38	91	94.907	Mus_caroli
ENSANAG00000031959	RBM38	100	95.370	ENSMUSG00000027510	Rbm38	91	95.370	Mus_musculus
ENSANAG00000031959	RBM38	100	95.041	MGP_PahariEiJ_G0026186	Rbm38	91	94.907	Mus_pahari
ENSANAG00000031959	RBM38	100	95.833	MGP_SPRETEiJ_G0025665	Rbm38	91	95.833	Mus_spretus
ENSANAG00000031959	RBM38	86	96.216	ENSMPUG00000006518	RBM38	93	96.257	Mustela_putorius_furo
ENSANAG00000031959	RBM38	100	90.741	ENSMLUG00000011140	RBM38	100	90.741	Myotis_lucifugus
ENSANAG00000031959	RBM38	85	92.000	ENSNGAG00000014017	-	64	93.243	Nannospalax_galili
ENSANAG00000031959	RBM38	78	94.681	ENSNBRG00000022545	-	92	67.672	Neolamprologus_brichardi
ENSANAG00000031959	RBM38	92	79.130	ENSNBRG00000022685	rbm38	91	61.161	Neolamprologus_brichardi
ENSANAG00000031959	RBM38	100	80.992	ENSMEUG00000005475	-	86	85.217	Notamacropus_eugenii
ENSANAG00000031959	RBM38	100	100.000	ENSODEG00000007980	RBM38	90	95.833	Octodon_degus
ENSANAG00000031959	RBM38	81	84.848	ENSONIG00000017073	rbm38	95	57.384	Oreochromis_niloticus
ENSANAG00000031959	RBM38	78	94.681	ENSONIG00000020324	-	92	67.532	Oreochromis_niloticus
ENSANAG00000031959	RBM38	100	78.704	ENSOANG00000009259	RBM38	83	79.630	Ornithorhynchus_anatinus
ENSANAG00000031959	RBM38	78	93.617	ENSORLG00000027180	-	92	65.665	Oryzias_latipes
ENSANAG00000031959	RBM38	78	87.368	ENSORLG00000012154	rbm38	93	55.230	Oryzias_latipes
ENSANAG00000031959	RBM38	78	93.617	ENSORLG00020020751	-	92	65.665	Oryzias_latipes_hni
ENSANAG00000031959	RBM38	80	85.714	ENSORLG00020017871	rbm38	93	56.067	Oryzias_latipes_hni
ENSANAG00000031959	RBM38	78	93.617	ENSORLG00015017040	-	92	66.524	Oryzias_latipes_hsok
ENSANAG00000031959	RBM38	94	78.947	ENSORLG00015012606	rbm38	90	59.447	Oryzias_latipes_hsok
ENSANAG00000031959	RBM38	78	93.617	ENSOMEG00000023912	-	92	64.935	Oryzias_melastigma
ENSANAG00000031959	RBM38	80	84.694	ENSOMEG00000006805	rbm38	93	55.649	Oryzias_melastigma
ENSANAG00000031959	RBM38	100	99.180	ENSOGAG00000029136	RBM38	90	98.148	Otolemur_garnettii
ENSANAG00000031959	RBM38	57	98.000	ENSPPAG00000040327	-	95	80.769	Pan_paniscus
ENSANAG00000031959	RBM38	100	98.347	ENSPPRG00000009507	RBM38	100	98.347	Panthera_pardus
ENSANAG00000031959	RBM38	81	100.000	ENSPTRG00000045845	-	70	97.656	Pan_troglodytes
ENSANAG00000031959	RBM38	100	99.174	ENSPTRG00000013661	RBM38	100	99.174	Pan_troglodytes
ENSANAG00000031959	RBM38	98	80.660	ENSPANG00000033127	-	92	79.439	Papio_anubis
ENSANAG00000031959	RBM38	100	100.000	ENSPANG00000020919	-	100	100.000	Papio_anubis
ENSANAG00000031959	RBM38	83	92.079	ENSPKIG00000018122	-	100	88.034	Paramormyrops_kingsleyae
ENSANAG00000031959	RBM38	84	85.849	ENSPKIG00000025417	rbm38	92	66.520	Paramormyrops_kingsleyae
ENSANAG00000031959	RBM38	100	80.275	ENSPSIG00000011649	RBM38	92	80.275	Pelodiscus_sinensis
ENSANAG00000031959	RBM38	81	84.848	ENSPMGG00000011343	rbm38	94	57.983	Periophthalmus_magnuspinnatus
ENSANAG00000031959	RBM38	78	87.234	ENSPMGG00000017094	-	92	65.236	Periophthalmus_magnuspinnatus
ENSANAG00000031959	RBM38	100	88.430	ENSPCIG00000013648	RBM38	92	81.193	Phascolarctos_cinereus
ENSANAG00000031959	RBM38	78	90.426	ENSPFOG00000011658	rbm38	91	57.692	Poecilia_formosa
ENSANAG00000031959	RBM38	78	95.745	ENSPLAG00000002500	-	92	66.525	Poecilia_latipinna
ENSANAG00000031959	RBM38	78	90.426	ENSPLAG00000005218	rbm38	91	57.692	Poecilia_latipinna
ENSANAG00000031959	RBM38	78	90.426	ENSPMEG00000015770	rbm38	91	57.692	Poecilia_mexicana
ENSANAG00000031959	RBM38	78	90.426	ENSPREG00000007398	rbm38	91	58.120	Poecilia_reticulata
ENSANAG00000031959	RBM38	100	99.180	ENSPCOG00000026201	RBM38	100	99.180	Propithecus_coquereli
ENSANAG00000031959	RBM38	84	97.260	ENSPVAG00000006457	RBM38	91	63.889	Pteropus_vampyrus
ENSANAG00000031959	RBM38	81	93.939	ENSPNYG00000019727	-	100	89.744	Pundamilia_nyererei
ENSANAG00000031959	RBM38	86	78.704	ENSPNYG00000021373	rbm38	92	60.987	Pundamilia_nyererei
ENSANAG00000031959	RBM38	82	91.089	ENSPNAG00000015123	-	96	78.030	Pygocentrus_nattereri
ENSANAG00000031959	RBM38	79	91.667	ENSPNAG00000010596	rbm38	88	65.258	Pygocentrus_nattereri
ENSANAG00000031959	RBM38	100	95.041	ENSRNOG00000006420	Rbm38	91	94.444	Rattus_norvegicus
ENSANAG00000031959	RBM38	100	88.430	ENSRROG00000036388	-	98	74.194	Rhinopithecus_roxellana
ENSANAG00000031959	RBM38	100	98.148	ENSSBOG00000031053	RBM38	100	100.000	Saimiri_boliviensis_boliviensis
ENSANAG00000031959	RBM38	78	93.617	ENSSFOG00015004453	rbm38	92	70.455	Scleropages_formosus
ENSANAG00000031959	RBM38	81	85.859	ENSSDUG00000022611	rbm38	93	60.084	Seriola_dumerili
ENSANAG00000031959	RBM38	78	93.617	ENSSDUG00000021082	RBM38	92	66.524	Seriola_dumerili
ENSANAG00000031959	RBM38	81	85.859	ENSSLDG00000010845	rbm38	90	63.889	Seriola_lalandi_dorsalis
ENSANAG00000031959	RBM38	78	93.617	ENSSLDG00000011778	RBM38	92	67.382	Seriola_lalandi_dorsalis
ENSANAG00000031959	RBM38	81	85.859	ENSSPAG00000011113	rbm38	93	58.824	Stegastes_partitus
ENSANAG00000031959	RBM38	78	93.617	ENSSPAG00000020989	RBM38	91	70.698	Stegastes_partitus
ENSANAG00000031959	RBM38	100	99.174	ENSSSCG00000007504	RBM38	90	95.833	Sus_scrofa
ENSANAG00000031959	RBM38	78	93.617	ENSTRUG00000019869	-	92	69.099	Takifugu_rubripes
ENSANAG00000031959	RBM38	78	88.298	ENSTRUG00000024954	rbm38	91	56.332	Takifugu_rubripes
ENSANAG00000031959	RBM38	78	94.681	ENSTNIG00000007093	-	97	71.622	Tetraodon_nigroviridis
ENSANAG00000031959	RBM38	98	89.916	ENSTBEG00000001689	-	55	94.845	Tupaia_belangeri
ENSANAG00000031959	RBM38	100	99.174	ENSUAMG00000019780	RBM38	90	95.833	Ursus_americanus
ENSANAG00000031959	RBM38	100	99.174	ENSVVUG00000017246	RBM38	90	95.370	Vulpes_vulpes
ENSANAG00000031959	RBM38	100	75.676	ENSXETG00000011268	rbm38	99	76.577	Xenopus_tropicalis
ENSANAG00000031959	RBM38	78	95.745	ENSXCOG00000017324	-	60	78.947	Xiphophorus_couchianus
ENSANAG00000031959	RBM38	77	91.398	ENSXMAG00000023662	rbm38	91	57.940	Xiphophorus_maculatus