EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000032752 (Gene tree)
Gene ID: 105712442
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 16992 bases
Position: chrKZ202201.1:765294-782285
Accession: 105712442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000030005	RRM_1	PF00076.22	7.8e-06	1	1
ENSANAP00000030000	RRM_1	PF00076.22	1.1e-05	1	1
ENSANAP00000029998	RRM_1	PF00076.22	2e-05	1	1
ENSANAP00000029991	RRM_1	PF00076.22	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000048022	RDM1-201	1550	XM_012445426	ENSANAP00000029991	284 (aa)	XP_012300849	A0A2K5E9T4
ENSANAT00000048031	RDM1-203	501	-	ENSANAP00000030000	166 (aa)	-	A0A2K5EA15
ENSANAT00000048029	RDM1-202	756	XM_012445427	ENSANAP00000029998	251 (aa)	XP_012300850	A0A2K5E9U0
ENSANAT00000048036	RDM1-204	420	-	ENSANAP00000030005	139 (aa)	-	A0A2K5EA20

Gene Model

Click here to download ENSANAG00000032752's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000032752's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000032752	RDM1	100	92.806	ENSG00000278023	RDM1	100	92.806	Homo_sapiens
ENSANAG00000032752	RDM1	96	45.926	ENSAPOG00000021886	zgc:103564	76	36.946	Acanthochromis_polyacanthus
ENSANAG00000032752	RDM1	96	45.185	ENSAPEG00000008929	zgc:103564	92	33.333	Amphiprion_percula
ENSANAG00000032752	RDM1	86	53.036	ENSAPLG00000004384	RDM1	94	53.036	Anas_platyrhynchos
ENSANAG00000032752	RDM1	95	56.061	ENSACAG00000012989	-	100	47.331	Anolis_carolinensis
ENSANAG00000032752	RDM1	100	86.567	ENSBTAG00000000030	RDM1	100	77.544	Bos_taurus
ENSANAG00000032752	RDM1	100	96.403	ENSCJAG00000015031	RDM1	100	96.403	Callithrix_jacchus
ENSANAG00000032752	RDM1	96	77.941	ENSCAFG00000015160	-	100	74.609	Canis_familiaris
ENSANAG00000032752	RDM1	96	86.466	ENSCHIG00000020607	RDM1	100	77.305	Capra_hircus
ENSANAG00000032752	RDM1	96	80.451	ENSCPOG00000001495	-	99	70.423	Cavia_porcellus
ENSANAG00000032752	RDM1	100	96.403	ENSCCAG00000035763	RDM1	100	96.403	Cebus_capucinus
ENSANAG00000032752	RDM1	100	92.806	ENSCATG00000044451	RDM1	100	92.806	Cercocebus_atys
ENSANAG00000032752	RDM1	94	87.218	ENSCSAG00000006209	RDM1	100	87.218	Chlorocebus_sabaeus
ENSANAG00000032752	RDM1	73	70.297	ENSCPBG00000009105	RDM1	93	55.645	Chrysemys_picta_bellii
ENSANAG00000032752	RDM1	100	93.373	ENSCANG00000041322	RDM1	100	93.373	Colobus_angolensis_palliatus
ENSANAG00000032752	RDM1	96	78.947	ENSCGRG00001015927	Rdm1	99	72.438	Cricetulus_griseus_chok1gshd
ENSANAG00000032752	RDM1	94	40.602	ENSCVAG00000001956	zgc:103564	96	34.432	Cyprinodon_variegatus
ENSANAG00000032752	RDM1	89	78.656	ENSDNOG00000045224	-	94	78.656	Dasypus_novemcinctus
ENSANAG00000032752	RDM1	73	88.235	ENSEASG00005010554	RDM1	69	79.381	Equus_asinus_asinus
ENSANAG00000032752	RDM1	96	90.226	ENSECAG00000022182	RDM1	91	81.569	Equus_caballus
ENSANAG00000032752	RDM1	81	82.178	ENSEEUG00000006127	RDM1	100	71.825	Erinaceus_europaeus
ENSANAG00000032752	RDM1	100	84.892	ENSFCAG00000043429	RDM1	100	84.892	Felis_catus
ENSANAG00000032752	RDM1	95	62.121	ENSGALG00000000243	RDM1	97	53.763	Gallus_gallus
ENSANAG00000032752	RDM1	73	69.307	ENSGAGG00000000293	-	78	54.365	Gopherus_agassizii
ENSANAG00000032752	RDM1	100	93.525	ENSGGOG00000010584	RDM1	100	93.525	Gorilla_gorilla
ENSANAG00000032752	RDM1	94	43.182	ENSHCOG00000002518	-	89	37.795	Hippocampus_comes
ENSANAG00000032752	RDM1	100	85.821	ENSSTOG00000022491	RDM1	100	82.042	Ictidomys_tridecemlineatus
ENSANAG00000032752	RDM1	96	85.714	ENSLAFG00000029300	RDM1	100	76.573	Loxodonta_africana
ENSANAG00000032752	RDM1	100	92.806	ENSMFAG00000032968	RDM1	100	92.806	Macaca_fascicularis
ENSANAG00000032752	RDM1	100	92.771	ENSMMUG00000006847	RDM1	100	92.771	Macaca_mulatta
ENSANAG00000032752	RDM1	100	92.806	ENSMNEG00000039977	RDM1	100	92.806	Macaca_nemestrina
ENSANAG00000032752	RDM1	100	92.771	ENSMLEG00000041158	RDM1	100	92.771	Mandrillus_leucophaeus
ENSANAG00000032752	RDM1	82	61.404	ENSMGAG00000008774	RDM1	96	53.846	Meleagris_gallopavo
ENSANAG00000032752	RDM1	99	78.358	ENSMAUG00000018559	Rdm1	99	72.887	Mesocricetus_auratus
ENSANAG00000032752	RDM1	100	91.045	ENSMICG00000038651	RDM1	100	89.130	Microcebus_murinus
ENSANAG00000032752	RDM1	96	76.692	ENSMOCG00000015095	Rdm1	99	68.841	Microtus_ochrogaster
ENSANAG00000032752	RDM1	95	72.727	ENSMODG00000011101	RDM1	100	63.768	Monodelphis_domestica
ENSANAG00000032752	RDM1	96	81.955	MGP_CAROLIEiJ_G0017226	Rdm1	99	72.438	Mus_caroli
ENSANAG00000032752	RDM1	96	81.203	ENSMUSG00000010362	Rdm1	99	72.500	Mus_musculus
ENSANAG00000032752	RDM1	99	82.090	MGP_PahariEiJ_G0018356	Rdm1	99	72.438	Mus_pahari
ENSANAG00000032752	RDM1	96	80.451	MGP_SPRETEiJ_G0018069	Rdm1	99	72.085	Mus_spretus
ENSANAG00000032752	RDM1	96	90.226	ENSMPUG00000008363	RDM1	100	81.119	Mustela_putorius_furo
ENSANAG00000032752	RDM1	100	95.181	ENSNLEG00000014173	RDM1	100	95.181	Nomascus_leucogenys
ENSANAG00000032752	RDM1	95	71.970	ENSMEUG00000015826	RDM1	95	68.644	Notamacropus_eugenii
ENSANAG00000032752	RDM1	96	82.707	ENSOCUG00000022704	RDM1	97	77.866	Oryctolagus_cuniculus
ENSANAG00000032752	RDM1	100	85.075	ENSOGAG00000011332	RDM1	100	82.394	Otolemur_garnettii
ENSANAG00000032752	RDM1	100	93.284	ENSPPAG00000029969	RDM1	100	92.606	Pan_paniscus
ENSANAG00000032752	RDM1	100	94.245	ENSPTRG00000009031	RDM1	100	94.245	Pan_troglodytes
ENSANAG00000032752	RDM1	100	92.806	ENSPANG00000022933	RDM1	100	92.806	Papio_anubis
ENSANAG00000032752	RDM1	96	78.195	ENSPEMG00000018985	Rdm1	99	72.183	Peromyscus_maniculatus_bairdii
ENSANAG00000032752	RDM1	100	93.284	ENSPPYG00000008198	RDM1	100	91.901	Pongo_abelii
ENSANAG00000032752	RDM1	100	85.075	ENSPCOG00000017995	RDM1	100	84.892	Propithecus_coquereli
ENSANAG00000032752	RDM1	96	87.970	ENSPVAG00000001116	RDM1	100	81.275	Pteropus_vampyrus
ENSANAG00000032752	RDM1	96	81.203	ENSRNOG00000020751	Rdm1	99	72.143	Rattus_norvegicus
ENSANAG00000032752	RDM1	100	92.771	ENSRBIG00000030000	RDM1	100	92.771	Rhinopithecus_bieti
ENSANAG00000032752	RDM1	100	92.771	ENSRROG00000035242	RDM1	100	92.771	Rhinopithecus_roxellana
ENSANAG00000032752	RDM1	95	75.758	ENSSHAG00000013584	RDM1	100	67.754	Sarcophilus_harrisii
ENSANAG00000032752	RDM1	93	62.791	ENSSPUG00000010941	RDM1	94	52.852	Sphenodon_punctatus
ENSANAG00000032752	RDM1	94	46.212	ENSSPAG00000011690	-	95	35.849	Stegastes_partitus
ENSANAG00000032752	RDM1	80	80.180	ENSSSCG00000017574	-	93	70.404	Sus_scrofa
ENSANAG00000032752	RDM1	81	82.353	ENSTBEG00000010030	RDM1	99	61.508	Tupaia_belangeri
ENSANAG00000032752	RDM1	96	88.722	ENSUAMG00000027279	RDM1	100	81.338	Ursus_americanus
ENSANAG00000032752	RDM1	96	88.722	ENSUMAG00000015423	RDM1	98	81.338	Ursus_maritimus