EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000032899 (Gene tree)
Gene ID: 105715449
Gene Symbol: SMG5
Alias: EST1B|KIAA1089|LPTS-RP1|LPTSRP1|RP11-54H19.7|SMG-5
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 43598 bases
Position: chrKZ205987.1:4719610-4763207
Accession: 105715449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000030413	EST1	PF10374.9	5.9e-24	1	1
ENSANAP00000030406	EST1	PF10374.9	8.3e-24	1	1
ENSANAP00000030406	EST1_DNA_bind	PF10373.9	3.6e-40	1	2
ENSANAP00000030406	EST1_DNA_bind	PF10373.9	3.6e-40	2	2
ENSANAP00000030413	EST1_DNA_bind	PF10373.9	3.6e-40	1	2
ENSANAP00000030413	EST1_DNA_bind	PF10373.9	3.6e-40	2	2
ENSANAP00000030406	PIN_4	PF13638.6	3.2e-05	1	1
ENSANAP00000030413	PIN_4	PF13638.6	3.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000048444	SMG5-201	5577	XM_012449824	ENSANAP00000030406	1006 (aa)	XP_012305247	A0A2K5EB06
ENSANAT00000048452	SMG5-202	3051	XM_012449823	ENSANAP00000030413	1016 (aa)	XP_012305246	A0A2K5EB03

Gene Model

Click here to download ENSANAG00000032899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000032899's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000032899	SMG5	100	98.130	ENSG00000198952	SMG5	100	98.130	Homo_sapiens
ENSANAG00000032899	SMG5	99	67.317	ENSAPOG00000019690	smg5	93	77.103	Acanthochromis_polyacanthus
ENSANAG00000032899	SMG5	99	92.440	ENSAMEG00000014458	SMG5	100	92.447	Ailuropoda_melanoleuca
ENSANAG00000032899	SMG5	99	65.029	ENSACIG00000001353	smg5	99	65.544	Amphilophus_citrinellus
ENSANAG00000032899	SMG5	99	64.293	ENSAOCG00000019483	smg5	93	78.066	Amphiprion_ocellaris
ENSANAG00000032899	SMG5	99	66.010	ENSAPEG00000022949	smg5	93	77.830	Amphiprion_percula
ENSANAG00000032899	SMG5	99	65.896	ENSATEG00000005348	smg5	99	67.119	Anabas_testudineus
ENSANAG00000032899	SMG5	99	78.906	ENSAPLG00000010263	SMG5	100	78.634	Anas_platyrhynchos
ENSANAG00000032899	SMG5	99	65.089	ENSACLG00000009311	smg5	99	66.442	Astatotilapia_calliptera
ENSANAG00000032899	SMG5	100	95.571	ENSBTAG00000009435	SMG5	100	95.571	Bos_taurus
ENSANAG00000032899	SMG5	99	44.391	ENSBTAG00000021747	-	99	43.424	Bos_taurus
ENSANAG00000032899	SMG5	100	99.409	ENSCJAG00000005684	SMG5	100	99.409	Callithrix_jacchus
ENSANAG00000032899	SMG5	100	94.193	ENSCAFG00000016839	SMG5	100	93.504	Canis_familiaris
ENSANAG00000032899	SMG5	100	94.193	ENSCAFG00020006061	SMG5	100	93.504	Canis_lupus_dingo
ENSANAG00000032899	SMG5	99	44.510	ENSCHIG00000006323	-	99	43.555	Capra_hircus
ENSANAG00000032899	SMG5	100	95.472	ENSCHIG00000007709	SMG5	100	95.472	Capra_hircus
ENSANAG00000032899	SMG5	100	96.559	ENSTSYG00000004099	SMG5	100	96.559	Carlito_syrichta
ENSANAG00000032899	SMG5	98	74.341	ENSCAPG00000003631	SMG5	100	74.974	Cavia_aperea
ENSANAG00000032899	SMG5	100	95.580	ENSCPOG00000015696	SMG5	100	95.285	Cavia_porcellus
ENSANAG00000032899	SMG5	100	99.213	ENSCCAG00000027409	SMG5	100	99.213	Cebus_capucinus
ENSANAG00000032899	SMG5	100	98.327	ENSCATG00000030539	SMG5	100	98.327	Cercocebus_atys
ENSANAG00000032899	SMG5	100	95.776	ENSCLAG00000003983	SMG5	100	95.678	Chinchilla_lanigera
ENSANAG00000032899	SMG5	100	98.228	ENSCSAG00000002120	SMG5	100	98.228	Chlorocebus_sabaeus
ENSANAG00000032899	SMG5	55	93.066	ENSCHOG00000008741	-	57	93.066	Choloepus_hoffmanni
ENSANAG00000032899	SMG5	94	78.905	ENSCPBG00000025848	SMG5	100	78.499	Chrysemys_picta_bellii
ENSANAG00000032899	SMG5	93	34.881	ENSCING00000008706	-	99	34.778	Ciona_intestinalis
ENSANAG00000032899	SMG5	100	93.898	ENSCANG00000029208	SMG5	100	93.898	Colobus_angolensis_palliatus
ENSANAG00000032899	SMG5	100	92.534	ENSCGRG00001006336	Smg5	100	92.240	Cricetulus_griseus_chok1gshd
ENSANAG00000032899	SMG5	99	92.548	ENSCGRG00000005111	Smg5	100	92.246	Cricetulus_griseus_crigri
ENSANAG00000032899	SMG5	99	65.467	ENSCSEG00000014220	smg5	92	77.778	Cynoglossus_semilaevis
ENSANAG00000032899	SMG5	99	60.721	ENSCVAG00000000529	smg5	99	61.224	Cyprinodon_variegatus
ENSANAG00000032899	SMG5	52	60.806	ENSDARG00000041481	smg5	98	62.604	Danio_rerio
ENSANAG00000032899	SMG5	100	92.126	ENSDNOG00000000051	SMG5	100	92.126	Dasypus_novemcinctus
ENSANAG00000032899	SMG5	93	36.853	ENSDNOG00000039862	-	100	35.474	Dasypus_novemcinctus
ENSANAG00000032899	SMG5	100	94.106	ENSDORG00000010382	Smg5	100	93.418	Dipodomys_ordii
ENSANAG00000032899	SMG5	66	35.484	FBgn0019890	Smg5	62	35.484	Drosophila_melanogaster
ENSANAG00000032899	SMG5	82	96.117	ENSETEG00000010336	SMG5	83	96.117	Echinops_telfairi
ENSANAG00000032899	SMG5	91	46.759	ENSEBUG00000003739	smg5	98	46.772	Eptatretus_burgeri
ENSANAG00000032899	SMG5	100	96.555	ENSEASG00005019122	SMG5	100	96.555	Equus_asinus_asinus
ENSANAG00000032899	SMG5	100	96.555	ENSECAG00000001389	SMG5	100	96.555	Equus_caballus
ENSANAG00000032899	SMG5	73	98.271	ENSEEUG00000012690	SMG5	73	98.271	Erinaceus_europaeus
ENSANAG00000032899	SMG5	99	65.063	ENSELUG00000012585	smg5	99	64.790	Esox_lucius
ENSANAG00000032899	SMG5	100	93.799	ENSFCAG00000011783	SMG5	100	93.019	Felis_catus
ENSANAG00000032899	SMG5	59	81.773	ENSFALG00000001166	-	99	81.910	Ficedula_albicollis
ENSANAG00000032899	SMG5	99	92.749	ENSFDAG00000017388	SMG5	100	92.649	Fukomys_damarensis
ENSANAG00000032899	SMG5	98	62.336	ENSFHEG00000013939	smg5	95	68.301	Fundulus_heteroclitus
ENSANAG00000032899	SMG5	99	61.879	ENSGMOG00000007310	smg5	92	76.376	Gadus_morhua
ENSANAG00000032899	SMG5	99	78.014	ENSGALG00000029918	-	100	77.714	Gallus_gallus
ENSANAG00000032899	SMG5	100	79.487	ENSGAGG00000016131	SMG5	100	79.392	Gopherus_agassizii
ENSANAG00000032899	SMG5	100	98.425	ENSGGOG00000010932	SMG5	100	98.425	Gorilla_gorilla
ENSANAG00000032899	SMG5	99	64.706	ENSHBUG00000008654	smg5	99	65.399	Haplochromis_burtoni
ENSANAG00000032899	SMG5	100	92.534	ENSHGLG00000019152	SMG5	100	92.731	Heterocephalus_glaber_female
ENSANAG00000032899	SMG5	90	92.771	ENSHGLG00100015948	SMG5	99	92.990	Heterocephalus_glaber_male
ENSANAG00000032899	SMG5	86	74.372	ENSHCOG00000010229	smg5	83	80.952	Hippocampus_comes
ENSANAG00000032899	SMG5	51	59.074	ENSIPUG00000006624	Smg5	99	61.987	Ictalurus_punctatus
ENSANAG00000032899	SMG5	100	96.559	ENSSTOG00000001780	SMG5	100	96.559	Ictidomys_tridecemlineatus
ENSANAG00000032899	SMG5	100	93.032	ENSJJAG00000022763	Smg5	100	92.836	Jaculus_jaculus
ENSANAG00000032899	SMG5	51	59.524	ENSKMAG00000014586	smg5	99	61.368	Kryptolebias_marmoratus
ENSANAG00000032899	SMG5	99	66.313	ENSLBEG00000002145	smg5	99	66.473	Labrus_bergylta
ENSANAG00000032899	SMG5	100	64.919	ENSLACG00000010521	SMG5	100	64.728	Latimeria_chalumnae
ENSANAG00000032899	SMG5	96	78.638	ENSLOCG00000008380	smg5	92	78.673	Lepisosteus_oculatus
ENSANAG00000032899	SMG5	100	94.390	ENSLAFG00000006241	SMG5	100	94.390	Loxodonta_africana
ENSANAG00000032899	SMG5	100	98.228	ENSMFAG00000045357	SMG5	100	98.228	Macaca_fascicularis
ENSANAG00000032899	SMG5	100	98.130	ENSMMUG00000000090	SMG5	100	98.130	Macaca_mulatta
ENSANAG00000032899	SMG5	100	98.130	ENSMNEG00000044425	SMG5	100	98.130	Macaca_nemestrina
ENSANAG00000032899	SMG5	100	91.961	ENSMLEG00000041192	SMG5	100	91.961	Mandrillus_leucophaeus
ENSANAG00000032899	SMG5	99	61.106	ENSMAMG00000010683	smg5	58	56.260	Mastacembelus_armatus
ENSANAG00000032899	SMG5	63	58.709	ENSMZEG00005016543	smg5	100	59.639	Maylandia_zebra
ENSANAG00000032899	SMG5	99	63.454	ENSMZEG00005015815	smg5	99	64.633	Maylandia_zebra
ENSANAG00000032899	SMG5	100	91.552	ENSMAUG00000010381	Smg5	100	91.356	Mesocricetus_auratus
ENSANAG00000032899	SMG5	55	45.391	ENSMAUG00000000043	-	96	44.637	Mesocricetus_auratus
ENSANAG00000032899	SMG5	100	97.343	ENSMICG00000002257	SMG5	100	97.343	Microcebus_murinus
ENSANAG00000032899	SMG5	100	91.471	ENSMOCG00000016590	Smg5	100	90.882	Microtus_ochrogaster
ENSANAG00000032899	SMG5	99	59.305	ENSMMOG00000017199	smg5	99	59.928	Mola_mola
ENSANAG00000032899	SMG5	93	37.073	ENSMODG00000004532	-	83	37.940	Monodelphis_domestica
ENSANAG00000032899	SMG5	87	89.865	ENSMODG00000016901	SMG5	98	90.315	Monodelphis_domestica
ENSANAG00000032899	SMG5	79	37.531	ENSMODG00000010675	-	84	37.666	Monodelphis_domestica
ENSANAG00000032899	SMG5	86	36.623	ENSMODG00000004735	-	86	39.467	Monodelphis_domestica
ENSANAG00000032899	SMG5	98	34.748	ENSMODG00000004511	-	99	34.022	Monodelphis_domestica
ENSANAG00000032899	SMG5	99	59.644	ENSMALG00000010375	smg5	99	58.563	Monopterus_albus
ENSANAG00000032899	SMG5	100	92.338	MGP_CAROLIEiJ_G0025163	Smg5	100	98.883	Mus_caroli
ENSANAG00000032899	SMG5	100	92.436	ENSMUSG00000001415	Smg5	99	98.883	Mus_musculus
ENSANAG00000032899	SMG5	100	92.051	MGP_PahariEiJ_G0026606	Smg5	100	98.883	Mus_pahari
ENSANAG00000032899	SMG5	100	92.240	MGP_SPRETEiJ_G0026104	Smg5	100	98.883	Mus_spretus
ENSANAG00000032899	SMG5	94	92.526	ENSMPUG00000004546	SMG5	100	91.789	Mustela_putorius_furo
ENSANAG00000032899	SMG5	100	94.618	ENSMLUG00000008518	SMG5	100	93.738	Myotis_lucifugus
ENSANAG00000032899	SMG5	98	44.489	ENSNGAG00000012101	-	98	44.786	Nannospalax_galili
ENSANAG00000032899	SMG5	100	93.314	ENSNGAG00000020706	Smg5	100	93.019	Nannospalax_galili
ENSANAG00000032899	SMG5	97	63.216	ENSNBRG00000004332	smg5	98	64.028	Neolamprologus_brichardi
ENSANAG00000032899	SMG5	100	97.933	ENSNLEG00000012439	SMG5	100	97.933	Nomascus_leucogenys
ENSANAG00000032899	SMG5	100	87.807	ENSMEUG00000012834	SMG5	100	86.922	Notamacropus_eugenii
ENSANAG00000032899	SMG5	100	93.898	ENSOPRG00000009152	SMG5	100	93.898	Ochotona_princeps
ENSANAG00000032899	SMG5	100	95.177	ENSODEG00000012237	SMG5	100	95.177	Octodon_degus
ENSANAG00000032899	SMG5	99	60.496	ENSONIG00000008632	smg5	92	78.066	Oreochromis_niloticus
ENSANAG00000032899	SMG5	89	40.535	ENSOCUG00000023338	-	99	39.935	Oryctolagus_cuniculus
ENSANAG00000032899	SMG5	99	95.358	ENSOCUG00000012886	SMG5	100	95.363	Oryctolagus_cuniculus
ENSANAG00000032899	SMG5	99	65.396	ENSORLG00020013127	smg5	99	65.789	Oryzias_latipes_hni
ENSANAG00000032899	SMG5	99	65.107	ENSORLG00015019014	smg5	99	65.437	Oryzias_latipes_hsok
ENSANAG00000032899	SMG5	82	59.657	ENSOMEG00000021330	smg5	92	60.707	Oryzias_melastigma
ENSANAG00000032899	SMG5	100	94.882	ENSOGAG00000004966	SMG5	100	94.882	Otolemur_garnettii
ENSANAG00000032899	SMG5	100	95.571	ENSOARG00000005778	SMG5	100	95.571	Ovis_aries
ENSANAG00000032899	SMG5	99	44.227	ENSOARG00000011963	-	99	43.567	Ovis_aries
ENSANAG00000032899	SMG5	100	97.933	ENSPPAG00000011996	SMG5	100	97.933	Pan_paniscus
ENSANAG00000032899	SMG5	99	93.643	ENSPPRG00000011901	SMG5	100	92.843	Panthera_pardus
ENSANAG00000032899	SMG5	99	85.572	ENSPTIG00000007892	SMG5	98	85.890	Panthera_tigris_altaica
ENSANAG00000032899	SMG5	100	98.130	ENSPTRG00000023925	SMG5	100	98.130	Pan_troglodytes
ENSANAG00000032899	SMG5	100	98.130	ENSPTRG00000049282	-	100	98.130	Pan_troglodytes
ENSANAG00000032899	SMG5	100	98.327	ENSPANG00000011201	SMG5	100	98.327	Papio_anubis
ENSANAG00000032899	SMG5	99	65.830	ENSPKIG00000009402	smg5	99	66.051	Paramormyrops_kingsleyae
ENSANAG00000032899	SMG5	99	80.556	ENSPSIG00000015198	SMG5	100	80.377	Pelodiscus_sinensis
ENSANAG00000032899	SMG5	99	60.422	ENSPMGG00000010465	smg5	99	60.721	Periophthalmus_magnuspinnatus
ENSANAG00000032899	SMG5	100	92.731	ENSPEMG00000001819	Smg5	100	92.436	Peromyscus_maniculatus_bairdii
ENSANAG00000032899	SMG5	56	45.951	ENSPEMG00000010022	-	95	45.423	Peromyscus_maniculatus_bairdii
ENSANAG00000032899	SMG5	99	49.614	ENSPMAG00000000410	smg5	100	49.810	Petromyzon_marinus
ENSANAG00000032899	SMG5	100	89.293	ENSPCIG00000018938	SMG5	100	89.686	Phascolarctos_cinereus
ENSANAG00000032899	SMG5	93	75.792	ENSPFOG00000010191	smg5	99	62.007	Poecilia_formosa
ENSANAG00000032899	SMG5	93	75.792	ENSPLAG00000009332	smg5	99	62.097	Poecilia_latipinna
ENSANAG00000032899	SMG5	93	75.792	ENSPMEG00000014105	smg5	99	65.392	Poecilia_mexicana
ENSANAG00000032899	SMG5	93	69.425	ENSPREG00000017713	smg5	99	62.097	Poecilia_reticulata
ENSANAG00000032899	SMG5	100	98.425	ENSPPYG00000000723	SMG5	100	98.425	Pongo_abelii
ENSANAG00000032899	SMG5	75	97.238	ENSPCAG00000008412	SMG5	81	97.238	Procavia_capensis
ENSANAG00000032899	SMG5	100	97.244	ENSPCOG00000004741	SMG5	100	97.244	Propithecus_coquereli
ENSANAG00000032899	SMG5	100	85.728	ENSPVAG00000016748	SMG5	100	85.728	Pteropus_vampyrus
ENSANAG00000032899	SMG5	99	59.789	ENSPNYG00000013397	smg5	99	61.239	Pundamilia_nyererei
ENSANAG00000032899	SMG5	100	92.338	ENSRNOG00000019590	Smg5	100	92.043	Rattus_norvegicus
ENSANAG00000032899	SMG5	100	98.031	ENSRBIG00000027428	SMG5	100	98.031	Rhinopithecus_bieti
ENSANAG00000032899	SMG5	100	97.933	ENSRROG00000030035	SMG5	100	97.933	Rhinopithecus_roxellana
ENSANAG00000032899	SMG5	100	99.213	ENSSBOG00000033339	SMG5	100	99.213	Saimiri_boliviensis_boliviensis
ENSANAG00000032899	SMG5	64	39.181	ENSSHAG00000000935	-	82	40.244	Sarcophilus_harrisii
ENSANAG00000032899	SMG5	99	88.778	ENSSHAG00000014163	SMG5	100	89.189	Sarcophilus_harrisii
ENSANAG00000032899	SMG5	99	33.269	ENSSHAG00000009572	-	99	32.529	Sarcophilus_harrisii
ENSANAG00000032899	SMG5	86	40.420	ENSSHAG00000000561	-	87	40.420	Sarcophilus_harrisii
ENSANAG00000032899	SMG5	99	65.574	ENSSFOG00015024175	smg5	99	65.984	Scleropages_formosus
ENSANAG00000032899	SMG5	99	60.904	ENSSMAG00000013059	smg5	99	62.210	Scophthalmus_maximus
ENSANAG00000032899	SMG5	99	60.035	ENSSDUG00000007122	smg5	92	76.869	Seriola_dumerili
ENSANAG00000032899	SMG5	97	60.627	ENSSLDG00000011418	smg5	92	77.594	Seriola_lalandi_dorsalis
ENSANAG00000032899	SMG5	90	80.916	ENSSARG00000012484	SMG5	100	80.916	Sorex_araneus
ENSANAG00000032899	SMG5	94	77.305	ENSSPUG00000002260	SMG5	100	76.393	Sphenodon_punctatus
ENSANAG00000032899	SMG5	91	76.581	ENSSPAG00000014266	smg5	99	64.430	Stegastes_partitus
ENSANAG00000032899	SMG5	100	97.047	ENSSSCG00000006490	-	100	97.047	Sus_scrofa
ENSANAG00000032899	SMG5	99	75.074	ENSSSCG00000039308	-	100	75.271	Sus_scrofa
ENSANAG00000032899	SMG5	53	36.197	ENSSSCG00000037182	-	85	37.905	Sus_scrofa
ENSANAG00000032899	SMG5	99	80.514	ENSTGUG00000003748	-	100	80.273	Taeniopygia_guttata
ENSANAG00000032899	SMG5	99	65.058	ENSTRUG00000012580	smg5	99	64.575	Takifugu_rubripes
ENSANAG00000032899	SMG5	99	65.310	ENSTNIG00000010303	smg5	99	65.179	Tetraodon_nigroviridis
ENSANAG00000032899	SMG5	60	100.000	ENSTBEG00000002777	SMG5	60	100.000	Tupaia_belangeri
ENSANAG00000032899	SMG5	100	91.535	ENSTTRG00000001401	SMG5	100	91.535	Tursiops_truncatus
ENSANAG00000032899	SMG5	100	93.307	ENSUAMG00000013721	SMG5	100	92.618	Ursus_americanus
ENSANAG00000032899	SMG5	100	87.810	ENSUMAG00000018041	SMG5	99	87.289	Ursus_maritimus
ENSANAG00000032899	SMG5	99	86.579	ENSVPAG00000009446	SMG5	99	86.579	Vicugna_pacos
ENSANAG00000032899	SMG5	100	94.193	ENSVVUG00000005887	SMG5	100	93.504	Vulpes_vulpes
ENSANAG00000032899	SMG5	77	66.204	ENSXETG00000033791	SMG5	99	65.448	Xenopus_tropicalis
ENSANAG00000032899	SMG5	99	65.830	ENSXMAG00000013499	smg5	99	65.673	Xiphophorus_maculatus