EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000033927 (Gene tree)
Gene ID: 105731264
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 77264 bases
Position: chrKZ200701.1:618835-696098
Accession: 105731264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000032650	RNA_pol_Rpb1_5	PF04998.17	1.3e-103	1	1
ENSANAP00000032650	RNA_pol_Rpb1_4	PF05000.17	2.3e-25	1	1
ENSANAP00000032650	RNA_pol_Rpb1_2	PF00623.20	3.8e-70	1	1
ENSANAP00000032650	RNA_pol_Rpb1_3	PF04983.18	5.2e-36	1	1
ENSANAP00000032650	RNA_pol_Rpb1_1	PF04997.12	1.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000050704	POLR1A-201	5268	XM_012472960	ENSANAP00000032650	1719 (aa)	XP_012328383	A0A2K5EHL3

Gene Model

Click here to download ENSANAG00000033927's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000033927's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000033927	POLR1A	62	31.203	ENSANAG00000028922	POLR3A	69	31.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000033927	POLR1A	100	94.186	ENSG00000068654	POLR1A	100	94.477	Homo_sapiens
ENSANAG00000033927	POLR1A	69	67.593	ENSAPOG00000017945	polr1a	99	67.593	Acanthochromis_polyacanthus
ENSANAG00000033927	POLR1A	100	89.529	ENSAMEG00000005807	POLR1A	100	91.189	Ailuropoda_melanoleuca
ENSANAG00000033927	POLR1A	100	63.173	ENSACIG00000022147	polr1a	100	62.999	Amphilophus_citrinellus
ENSANAG00000033927	POLR1A	100	66.029	ENSAOCG00000017336	polr1a	100	67.346	Amphiprion_ocellaris
ENSANAG00000033927	POLR1A	95	75.000	ENSAPEG00000016105	polr1a	98	75.000	Amphiprion_percula
ENSANAG00000033927	POLR1A	100	65.110	ENSATEG00000016773	polr1a	100	65.414	Anabas_testudineus
ENSANAG00000033927	POLR1A	86	72.900	ENSAPLG00000013871	POLR1A	99	72.230	Anas_platyrhynchos
ENSANAG00000033927	POLR1A	99	70.092	ENSACAG00000012141	POLR1A	99	69.182	Anolis_carolinensis
ENSANAG00000033927	POLR1A	100	62.189	ENSACLG00000020541	polr1a	100	61.445	Astatotilapia_calliptera
ENSANAG00000033927	POLR1A	100	88.488	ENSBTAG00000006481	POLR1A	100	88.960	Bos_taurus
ENSANAG00000033927	POLR1A	99	38.793	WBGene00012999	rpoa-1	98	38.552	Caenorhabditis_elegans
ENSANAG00000033927	POLR1A	100	97.500	ENSCJAG00000019547	POLR1A	100	97.500	Callithrix_jacchus
ENSANAG00000033927	POLR1A	100	90.116	ENSCAFG00000007613	POLR1A	100	89.709	Canis_familiaris
ENSANAG00000033927	POLR1A	100	89.913	ENSCAFG00020014752	POLR1A	100	89.507	Canis_lupus_dingo
ENSANAG00000033927	POLR1A	100	86.957	ENSCHIG00000018204	POLR1A	99	88.148	Capra_hircus
ENSANAG00000033927	POLR1A	100	88.721	ENSTSYG00000002761	POLR1A	100	88.663	Carlito_syrichta
ENSANAG00000033927	POLR1A	97	83.602	ENSCAPG00000010132	POLR1A	100	83.154	Cavia_aperea
ENSANAG00000033927	POLR1A	100	88.095	ENSCPOG00000012350	POLR1A	100	87.805	Cavia_porcellus
ENSANAG00000033927	POLR1A	100	98.023	ENSCCAG00000019839	POLR1A	100	98.023	Cebus_capucinus
ENSANAG00000033927	POLR1A	100	94.767	ENSCATG00000029786	POLR1A	100	95.058	Cercocebus_atys
ENSANAG00000033927	POLR1A	100	88.051	ENSCLAG00000005187	POLR1A	100	88.051	Chinchilla_lanigera
ENSANAG00000033927	POLR1A	100	94.942	ENSCSAG00000016251	POLR1A	100	95.116	Chlorocebus_sabaeus
ENSANAG00000033927	POLR1A	99	73.984	ENSCPBG00000001115	POLR1A	99	73.797	Chrysemys_picta_bellii
ENSANAG00000033927	POLR1A	99	46.382	ENSCSAVG00000007184	-	91	55.100	Ciona_savignyi
ENSANAG00000033927	POLR1A	100	92.040	ENSCANG00000031785	POLR1A	100	91.981	Colobus_angolensis_palliatus
ENSANAG00000033927	POLR1A	96	88.394	ENSCGRG00001006651	Polr1a	100	82.503	Cricetulus_griseus_chok1gshd
ENSANAG00000033927	POLR1A	60	86.834	ENSCGRG00000010834	Polr1a	100	86.557	Cricetulus_griseus_crigri
ENSANAG00000033927	POLR1A	100	61.463	ENSCSEG00000020190	polr1a	100	61.463	Cynoglossus_semilaevis
ENSANAG00000033927	POLR1A	100	63.709	ENSCVAG00000020941	polr1a	100	64.315	Cyprinodon_variegatus
ENSANAG00000033927	POLR1A	100	66.570	ENSDARG00000098375	polr1a	100	66.454	Danio_rerio
ENSANAG00000033927	POLR1A	100	81.961	ENSDNOG00000010829	POLR1A	100	81.671	Dasypus_novemcinctus
ENSANAG00000033927	POLR1A	100	87.218	ENSDORG00000008298	Polr1a	100	87.102	Dipodomys_ordii
ENSANAG00000033927	POLR1A	72	100.000	ENSETEG00000000412	-	72	100.000	Echinops_telfairi
ENSANAG00000033927	POLR1A	86	65.116	ENSEBUG00000005667	-	99	47.610	Eptatretus_burgeri
ENSANAG00000033927	POLR1A	100	90.814	ENSEASG00005001625	POLR1A	100	90.930	Equus_asinus_asinus
ENSANAG00000033927	POLR1A	100	90.698	ENSECAG00000036306	-	100	91.551	Equus_caballus
ENSANAG00000033927	POLR1A	100	90.698	ENSECAG00000010092	POLR1A	100	91.551	Equus_caballus
ENSANAG00000033927	POLR1A	100	90.698	ENSECAG00000030510	-	100	91.551	Equus_caballus
ENSANAG00000033927	POLR1A	85	92.553	ENSEEUG00000000676	POLR1A	85	92.410	Erinaceus_europaeus
ENSANAG00000033927	POLR1A	100	67.092	ENSELUG00000012769	polr1a	99	67.112	Esox_lucius
ENSANAG00000033927	POLR1A	100	90.809	ENSFCAG00000008966	POLR1A	100	90.518	Felis_catus
ENSANAG00000033927	POLR1A	99	71.051	ENSFALG00000010082	POLR1A	99	71.051	Ficedula_albicollis
ENSANAG00000033927	POLR1A	100	88.263	ENSFDAG00000013726	POLR1A	100	87.972	Fukomys_damarensis
ENSANAG00000033927	POLR1A	100	61.556	ENSFHEG00000005996	polr1a	100	61.436	Fundulus_heteroclitus
ENSANAG00000033927	POLR1A	100	59.802	ENSGMOG00000002230	polr1a	100	59.687	Gadus_morhua
ENSANAG00000033927	POLR1A	90	69.730	ENSGALG00000038160	-	99	69.859	Gallus_gallus
ENSANAG00000033927	POLR1A	100	64.580	ENSGAFG00000015266	polr1a	100	64.203	Gambusia_affinis
ENSANAG00000033927	POLR1A	100	64.655	ENSGACG00000018791	polr1a	100	64.655	Gasterosteus_aculeatus
ENSANAG00000033927	POLR1A	89	74.855	ENSGAGG00000004984	-	96	80.657	Gopherus_agassizii
ENSANAG00000033927	POLR1A	100	94.244	ENSGGOG00000001788	POLR1A	100	94.535	Gorilla_gorilla
ENSANAG00000033927	POLR1A	90	64.326	ENSHBUG00000020021	polr1a	99	64.326	Haplochromis_burtoni
ENSANAG00000033927	POLR1A	100	88.088	ENSHGLG00000006334	POLR1A	100	87.798	Heterocephalus_glaber_female
ENSANAG00000033927	POLR1A	100	87.833	ENSHGLG00100006614	POLR1A	100	87.543	Heterocephalus_glaber_male
ENSANAG00000033927	POLR1A	100	61.795	ENSHCOG00000003345	polr1a	100	61.973	Hippocampus_comes
ENSANAG00000033927	POLR1A	100	65.914	ENSIPUG00000013174	polr1a	100	65.283	Ictalurus_punctatus
ENSANAG00000033927	POLR1A	99	86.263	ENSSTOG00000012580	POLR1A	99	86.321	Ictidomys_tridecemlineatus
ENSANAG00000033927	POLR1A	100	86.941	ENSJJAG00000013113	Polr1a	100	86.593	Jaculus_jaculus
ENSANAG00000033927	POLR1A	100	65.601	ENSKMAG00000007399	polr1a	100	65.253	Kryptolebias_marmoratus
ENSANAG00000033927	POLR1A	95	67.554	ENSLBEG00000015401	polr1a	99	67.388	Labrus_bergylta
ENSANAG00000033927	POLR1A	53	76.279	ENSLACG00000003218	polr1a	100	76.279	Latimeria_chalumnae
ENSANAG00000033927	POLR1A	100	70.388	ENSLOCG00000010881	polr1a	100	69.775	Lepisosteus_oculatus
ENSANAG00000033927	POLR1A	100	88.368	ENSLAFG00000014948	POLR1A	100	88.715	Loxodonta_africana
ENSANAG00000033927	POLR1A	100	95.000	ENSMFAG00000046097	POLR1A	100	95.174	Macaca_fascicularis
ENSANAG00000033927	POLR1A	100	95.000	ENSMMUG00000015815	POLR1A	100	95.174	Macaca_mulatta
ENSANAG00000033927	POLR1A	100	94.942	ENSMNEG00000043313	POLR1A	100	95.116	Macaca_nemestrina
ENSANAG00000033927	POLR1A	100	94.244	ENSMLEG00000042428	POLR1A	100	94.419	Mandrillus_leucophaeus
ENSANAG00000033927	POLR1A	100	65.796	ENSMAMG00000016565	polr1a	100	65.371	Mastacembelus_armatus
ENSANAG00000033927	POLR1A	100	65.547	ENSMZEG00005004915	polr1a	100	64.835	Maylandia_zebra
ENSANAG00000033927	POLR1A	99	69.066	ENSMGAG00000013111	POLR1A	99	69.356	Meleagris_gallopavo
ENSANAG00000033927	POLR1A	92	87.231	ENSMAUG00000008497	Polr1a	100	87.105	Mesocricetus_auratus
ENSANAG00000033927	POLR1A	100	91.400	ENSMICG00000000757	POLR1A	100	91.226	Microcebus_murinus
ENSANAG00000033927	POLR1A	100	86.674	ENSMOCG00000000122	Polr1a	100	86.790	Microtus_ochrogaster
ENSANAG00000033927	POLR1A	100	64.866	ENSMMOG00000010216	polr1a	100	64.925	Mola_mola
ENSANAG00000033927	POLR1A	100	74.943	ENSMODG00000009335	POLR1A	100	74.453	Monodelphis_domestica
ENSANAG00000033927	POLR1A	100	65.081	ENSMALG00000013363	polr1a	100	64.624	Monopterus_albus
ENSANAG00000033927	POLR1A	100	85.805	MGP_CAROLIEiJ_G0028494	Polr1a	100	85.632	Mus_caroli
ENSANAG00000033927	POLR1A	100	86.095	ENSMUSG00000049553	Polr1a	100	85.921	Mus_musculus
ENSANAG00000033927	POLR1A	100	86.211	MGP_PahariEiJ_G0022230	Polr1a	100	86.037	Mus_pahari
ENSANAG00000033927	POLR1A	100	84.339	MGP_SPRETEiJ_G0029499	Polr1a	100	84.637	Mus_spretus
ENSANAG00000033927	POLR1A	100	90.111	ENSMPUG00000009135	POLR1A	100	89.703	Mustela_putorius_furo
ENSANAG00000033927	POLR1A	100	88.600	ENSMLUG00000015723	POLR1A	100	88.368	Myotis_lucifugus
ENSANAG00000033927	POLR1A	100	87.435	ENSNGAG00000017907	Polr1a	100	87.319	Nannospalax_galili
ENSANAG00000033927	POLR1A	100	65.547	ENSNBRG00000000519	polr1a	100	65.046	Neolamprologus_brichardi
ENSANAG00000033927	POLR1A	100	92.014	ENSNLEG00000002264	POLR1A	100	92.303	Nomascus_leucogenys
ENSANAG00000033927	POLR1A	75	92.913	ENSMEUG00000011665	-	75	92.913	Notamacropus_eugenii
ENSANAG00000033927	POLR1A	99	81.732	ENSOPRG00000008269	POLR1A	100	81.909	Ochotona_princeps
ENSANAG00000033927	POLR1A	100	88.146	ENSODEG00000003542	POLR1A	100	88.146	Octodon_degus
ENSANAG00000033927	POLR1A	100	65.585	ENSONIG00000015895	polr1a	100	65.759	Oreochromis_niloticus
ENSANAG00000033927	POLR1A	100	89.541	ENSOCUG00000010138	POLR1A	100	89.657	Oryctolagus_cuniculus
ENSANAG00000033927	POLR1A	100	64.971	ENSORLG00000008753	polr1a	99	64.426	Oryzias_latipes
ENSANAG00000033927	POLR1A	100	63.636	ENSORLG00020020726	polr1a	99	62.658	Oryzias_latipes_hni
ENSANAG00000033927	POLR1A	96	76.596	ENSORLG00015016071	polr1a	99	76.667	Oryzias_latipes_hsok
ENSANAG00000033927	POLR1A	100	90.000	ENSOGAG00000004031	POLR1A	100	90.000	Otolemur_garnettii
ENSANAG00000033927	POLR1A	100	88.502	ENSOARG00000020601	POLR1A	100	88.502	Ovis_aries
ENSANAG00000033927	POLR1A	100	94.128	ENSPPAG00000042450	POLR1A	100	94.419	Pan_paniscus
ENSANAG00000033927	POLR1A	100	90.867	ENSPPRG00000006702	POLR1A	100	90.576	Panthera_pardus
ENSANAG00000033927	POLR1A	100	90.319	ENSPTIG00000018783	POLR1A	100	90.029	Panthera_tigris_altaica
ENSANAG00000033927	POLR1A	100	93.953	ENSPTRG00000012147	POLR1A	100	94.244	Pan_troglodytes
ENSANAG00000033927	POLR1A	100	94.767	ENSPANG00000025908	POLR1A	100	95.058	Papio_anubis
ENSANAG00000033927	POLR1A	94	77.778	ENSPKIG00000005468	polr1a	99	77.778	Paramormyrops_kingsleyae
ENSANAG00000033927	POLR1A	63	70.599	ENSPSIG00000009321	-	99	70.917	Pelodiscus_sinensis
ENSANAG00000033927	POLR1A	54	68.342	ENSPMGG00000009718	polr1a	95	68.342	Periophthalmus_magnuspinnatus
ENSANAG00000033927	POLR1A	100	87.659	ENSPEMG00000022224	Polr1a	100	87.543	Peromyscus_maniculatus_bairdii
ENSANAG00000033927	POLR1A	95	78.845	ENSPCIG00000004222	POLR1A	99	78.954	Phascolarctos_cinereus
ENSANAG00000033927	POLR1A	100	65.104	ENSPFOG00000005025	polr1a	100	65.026	Poecilia_formosa
ENSANAG00000033927	POLR1A	100	65.101	ENSPLAG00000021389	polr1a	100	65.101	Poecilia_latipinna
ENSANAG00000033927	POLR1A	100	63.478	ENSPMEG00000006463	polr1a	100	63.731	Poecilia_mexicana
ENSANAG00000033927	POLR1A	100	65.278	ENSPREG00000002389	polr1a	100	65.046	Poecilia_reticulata
ENSANAG00000033927	POLR1A	100	93.605	ENSPPYG00000012217	POLR1A	100	93.895	Pongo_abelii
ENSANAG00000033927	POLR1A	92	96.000	ENSPCAG00000011582	POLR1A	92	96.000	Procavia_capensis
ENSANAG00000033927	POLR1A	100	90.994	ENSPCOG00000026987	POLR1A	100	90.877	Propithecus_coquereli
ENSANAG00000033927	POLR1A	95	90.441	ENSPVAG00000012674	POLR1A	95	89.753	Pteropus_vampyrus
ENSANAG00000033927	POLR1A	100	65.411	ENSPNYG00000000026	polr1a	100	64.835	Pundamilia_nyererei
ENSANAG00000033927	POLR1A	100	66.493	ENSPNAG00000019223	polr1a	100	66.899	Pygocentrus_nattereri
ENSANAG00000033927	POLR1A	100	87.486	ENSRNOG00000009545	Polr1a	100	87.370	Rattus_norvegicus
ENSANAG00000033927	POLR1A	100	94.186	ENSRBIG00000028335	POLR1A	100	94.360	Rhinopithecus_bieti
ENSANAG00000033927	POLR1A	100	94.128	ENSRROG00000031473	POLR1A	100	94.302	Rhinopithecus_roxellana
ENSANAG00000033927	POLR1A	99	36.751	YOR341W	RPA190	99	36.527	Saccharomyces_cerevisiae
ENSANAG00000033927	POLR1A	100	97.442	ENSSBOG00000030262	POLR1A	100	97.442	Saimiri_boliviensis_boliviensis
ENSANAG00000033927	POLR1A	100	73.183	ENSSHAG00000014739	POLR1A	100	73.126	Sarcophilus_harrisii
ENSANAG00000033927	POLR1A	100	67.400	ENSSFOG00015019716	polr1a	100	67.054	Scleropages_formosus
ENSANAG00000033927	POLR1A	100	65.951	ENSSMAG00000014342	polr1a	100	65.489	Scophthalmus_maximus
ENSANAG00000033927	POLR1A	100	66.512	ENSSDUG00000014631	polr1a	100	66.532	Seriola_dumerili
ENSANAG00000033927	POLR1A	100	64.832	ENSSLDG00000024095	polr1a	100	64.628	Seriola_lalandi_dorsalis
ENSANAG00000033927	POLR1A	75	94.681	ENSSARG00000003136	-	76	94.681	Sorex_araneus
ENSANAG00000033927	POLR1A	94	77.949	ENSSPUG00000004215	POLR1A	98	77.949	Sphenodon_punctatus
ENSANAG00000033927	POLR1A	63	71.315	ENSSPAG00000016341	polr1a	94	71.315	Stegastes_partitus
ENSANAG00000033927	POLR1A	83	89.629	ENSSSCG00000008226	POLR1A	99	89.670	Sus_scrofa
ENSANAG00000033927	POLR1A	99	70.353	ENSTGUG00000010704	POLR1A	100	70.447	Taeniopygia_guttata
ENSANAG00000033927	POLR1A	100	63.448	ENSTRUG00000002210	polr1a	99	63.905	Takifugu_rubripes
ENSANAG00000033927	POLR1A	100	60.276	ENSTNIG00000010116	polr1a	100	60.219	Tetraodon_nigroviridis
ENSANAG00000033927	POLR1A	74	96.460	ENSTBEG00000008646	POLR1A	74	96.460	Tupaia_belangeri
ENSANAG00000033927	POLR1A	100	85.233	ENSTTRG00000008597	POLR1A	100	85.058	Tursiops_truncatus
ENSANAG00000033927	POLR1A	69	90.525	ENSUAMG00000012158	-	94	89.932	Ursus_americanus
ENSANAG00000033927	POLR1A	100	89.180	ENSUMAG00000006700	POLR1A	100	88.773	Ursus_maritimus
ENSANAG00000033927	POLR1A	100	89.942	ENSVVUG00000001245	POLR1A	100	89.535	Vulpes_vulpes
ENSANAG00000033927	POLR1A	100	67.824	ENSXETG00000001952	polr1a	100	68.978	Xenopus_tropicalis
ENSANAG00000033927	POLR1A	100	65.238	ENSXMAG00000004032	polr1a	100	64.405	Xiphophorus_maculatus