EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000034241 (Gene tree)
Gene ID: 105722701
Gene Symbol: SNRPN
Alias: HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN
Full Name: small nuclear ribonucleoprotein polypeptide N
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 4280 bases
Position: chrKZ202154.1:3245828-3250107
Accession: 105722701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000033124	LSM	PF01423.22	1e-19	1	1
ENSANAP00000033126	LSM	PF01423.22	1e-19	1	1
ENSANAP00000033135	LSM	PF01423.22	1.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000051190	SNRPN-203	807	-	ENSANAP00000033135	268 (aa)	-	A0A2K5EIV0
ENSANAT00000051178	SNRPN-201	723	XM_012460382	ENSANAP00000033124	240 (aa)	XP_012315805	A0A2K5EIX0
ENSANAT00000051180	SNRPN-202	723	-	ENSANAP00000033126	240 (aa)	-	A0A2K5EIV7

Gene Model

Click here to download ENSANAG00000034241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000034241's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000034241	SNRPN	92	92.760	ENSANAG00000024443	-	99	92.544
ENSANAG00000034241	SNRPN	96	85.714	ENSANAG00000036271	-	86	86.385
ENSANAG00000034241	SNRPN	90	85.581	ENSANAG00000020364	-	54	83.962

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000034241	SNRPN	100	100.000	ENSG00000128739	SNRPN	100	100.000	Homo_sapiens
ENSANAG00000034241	SNRPN	100	99.583	ENSAMEG00000007034	SNRPN	98	99.583	Ailuropoda_melanoleuca
ENSANAG00000034241	SNRPN	100	98.750	ENSBTAG00000008251	SNRPN	100	98.750	Bos_taurus
ENSANAG00000034241	SNRPN	95	99.561	ENSCJAG00000042622	-	96	98.690	Callithrix_jacchus
ENSANAG00000034241	SNRPN	100	100.000	ENSCJAG00000003759	-	100	100.000	Callithrix_jacchus
ENSANAG00000034241	SNRPN	100	99.583	ENSCAFG00000010127	SNRPN	100	99.583	Canis_familiaris
ENSANAG00000034241	SNRPN	100	99.583	ENSCAFG00020024075	SNRPN	100	99.583	Canis_lupus_dingo
ENSANAG00000034241	SNRPN	100	98.750	ENSCHIG00000017477	SNRPN	100	98.750	Capra_hircus
ENSANAG00000034241	SNRPN	100	100.000	ENSTSYG00000005248	SNRPN	100	100.000	Carlito_syrichta
ENSANAG00000034241	SNRPN	100	100.000	ENSCAPG00000003047	SNRPN	100	100.000	Cavia_aperea
ENSANAG00000034241	SNRPN	100	100.000	ENSCPOG00000020270	SNRPN	100	100.000	Cavia_porcellus
ENSANAG00000034241	SNRPN	100	100.000	ENSCCAG00000024231	SNRPN	100	100.000	Cebus_capucinus
ENSANAG00000034241	SNRPN	100	100.000	ENSCATG00000032518	SNRPN	100	100.000	Cercocebus_atys
ENSANAG00000034241	SNRPN	100	100.000	ENSCLAG00000011376	SNRPN	100	100.000	Chinchilla_lanigera
ENSANAG00000034241	SNRPN	100	100.000	ENSCSAG00000006406	SNRPN	100	100.000	Chlorocebus_sabaeus
ENSANAG00000034241	SNRPN	98	98.718	ENSCHOG00000001846	SNRPN	88	98.718	Choloepus_hoffmanni
ENSANAG00000034241	SNRPN	100	100.000	ENSCANG00000041156	SNRPN	100	100.000	Colobus_angolensis_palliatus
ENSANAG00000034241	SNRPN	100	99.583	ENSCGRG00001004136	Snrpn	100	99.583	Cricetulus_griseus_chok1gshd
ENSANAG00000034241	SNRPN	100	99.167	ENSCGRG00000001621	Snrpn	100	99.167	Cricetulus_griseus_crigri
ENSANAG00000034241	SNRPN	72	92.486	ENSCVAG00000014193	SNRPN	96	77.186	Cyprinodon_variegatus
ENSANAG00000034241	SNRPN	100	98.750	ENSDNOG00000037060	SNRPN	98	99.163	Dasypus_novemcinctus
ENSANAG00000034241	SNRPN	100	99.583	ENSDORG00000004527	Snrpn	100	99.583	Dipodomys_ordii
ENSANAG00000034241	SNRPN	100	99.583	ENSEASG00005017871	SNRPN	100	99.583	Equus_asinus_asinus
ENSANAG00000034241	SNRPN	100	99.583	ENSECAG00000018148	SNRPN	100	99.583	Equus_caballus
ENSANAG00000034241	SNRPN	99	98.745	ENSEEUG00000007440	-	100	98.745	Erinaceus_europaeus
ENSANAG00000034241	SNRPN	100	99.583	ENSFCAG00000022298	-	100	99.583	Felis_catus
ENSANAG00000034241	SNRPN	100	99.583	ENSFDAG00000016578	-	100	99.583	Fukomys_damarensis
ENSANAG00000034241	SNRPN	76	85.792	ENSFDAG00000010528	-	98	84.058	Fukomys_damarensis
ENSANAG00000034241	SNRPN	74	76.836	ENSGMOG00000018161	SNRPN	74	76.190	Gadus_morhua
ENSANAG00000034241	SNRPN	90	73.488	ENSGGOG00000024469	-	69	83.942	Gorilla_gorilla
ENSANAG00000034241	SNRPN	100	100.000	ENSGGOG00000003988	SNRPN	100	100.000	Gorilla_gorilla
ENSANAG00000034241	SNRPN	100	100.000	ENSHGLG00000011924	SNRPN	100	100.000	Heterocephalus_glaber_female
ENSANAG00000034241	SNRPN	89	91.549	ENSHGLG00000019812	-	95	91.667	Heterocephalus_glaber_female
ENSANAG00000034241	SNRPN	100	85.417	ENSHGLG00000002327	-	95	85.526	Heterocephalus_glaber_female
ENSANAG00000034241	SNRPN	90	80.930	ENSHGLG00000020936	-	97	76.955	Heterocephalus_glaber_female
ENSANAG00000034241	SNRPN	100	82.917	ENSHGLG00100004881	-	95	83.772	Heterocephalus_glaber_male
ENSANAG00000034241	SNRPN	100	100.000	ENSHGLG00100016559	SNRPN	100	100.000	Heterocephalus_glaber_male
ENSANAG00000034241	SNRPN	89	91.549	ENSHGLG00100021056	-	95	91.667	Heterocephalus_glaber_male
ENSANAG00000034241	SNRPN	100	100.000	ENSSTOG00000001339	SNRPN	100	100.000	Ictidomys_tridecemlineatus
ENSANAG00000034241	SNRPN	100	99.583	ENSLAFG00000009458	SNRPN	100	99.583	Loxodonta_africana
ENSANAG00000034241	SNRPN	100	100.000	ENSMFAG00000042235	SNRPN	100	100.000	Macaca_fascicularis
ENSANAG00000034241	SNRPN	100	100.000	ENSMMUG00000023139	SNURF	100	100.000	Macaca_mulatta
ENSANAG00000034241	SNRPN	100	100.000	ENSMNEG00000031291	SNRPN	100	100.000	Macaca_nemestrina
ENSANAG00000034241	SNRPN	100	100.000	ENSMLEG00000038837	SNRPN	100	100.000	Mandrillus_leucophaeus
ENSANAG00000034241	SNRPN	92	85.909	ENSMGAG00000008696	SNRPN	92	85.909	Meleagris_gallopavo
ENSANAG00000034241	SNRPN	100	100.000	ENSMAUG00000000051	Snrpn	100	100.000	Mesocricetus_auratus
ENSANAG00000034241	SNRPN	100	100.000	ENSMICG00000042356	SNRPN	100	100.000	Microcebus_murinus
ENSANAG00000034241	SNRPN	100	100.000	ENSMOCG00000015350	Snrpn	100	100.000	Microtus_ochrogaster
ENSANAG00000034241	SNRPN	92	94.118	ENSMODG00000013926	-	92	94.118	Monodelphis_domestica
ENSANAG00000034241	SNRPN	100	100.000	MGP_CAROLIEiJ_G0029815	Snrpn	100	100.000	Mus_caroli
ENSANAG00000034241	SNRPN	100	100.000	ENSMUSG00000102252	Snrpn	100	100.000	Mus_musculus
ENSANAG00000034241	SNRPN	100	100.000	MGP_PahariEiJ_G0013040	Snrpn	100	100.000	Mus_pahari
ENSANAG00000034241	SNRPN	100	100.000	MGP_SPRETEiJ_G0030918	Snrpn	100	100.000	Mus_spretus
ENSANAG00000034241	SNRPN	88	51.659	ENSMPUG00000007115	-	64	70.423	Mustela_putorius_furo
ENSANAG00000034241	SNRPN	100	99.583	ENSMPUG00000014638	-	100	99.583	Mustela_putorius_furo
ENSANAG00000034241	SNRPN	95	62.281	ENSMLUG00000024428	-	62	71.111	Myotis_lucifugus
ENSANAG00000034241	SNRPN	85	60.784	ENSMLUG00000025849	-	73	63.057	Myotis_lucifugus
ENSANAG00000034241	SNRPN	100	99.167	ENSMLUG00000023361	-	98	99.167	Myotis_lucifugus
ENSANAG00000034241	SNRPN	100	100.000	ENSNGAG00000000181	Snrpn	100	100.000	Nannospalax_galili
ENSANAG00000034241	SNRPN	100	83.750	ENSNLEG00000001376	SNRPN	99	83.750	Nomascus_leucogenys
ENSANAG00000034241	SNRPN	100	95.833	ENSODEG00000019708	-	96	99.123	Octodon_degus
ENSANAG00000034241	SNRPN	100	99.583	ENSODEG00000013478	-	100	99.583	Octodon_degus
ENSANAG00000034241	SNRPN	100	99.167	ENSODEG00000020110	-	100	99.167	Octodon_degus
ENSANAG00000034241	SNRPN	98	81.197	ENSODEG00000016065	-	87	86.473	Octodon_degus
ENSANAG00000034241	SNRPN	100	99.585	ENSOCUG00000003532	-	100	99.585	Oryctolagus_cuniculus
ENSANAG00000034241	SNRPN	73	93.182	ENSORLG00020007490	SNRPN	96	78.327	Oryzias_latipes_hni
ENSANAG00000034241	SNRPN	73	93.182	ENSORLG00015003332	SNRPN	96	78.327	Oryzias_latipes_hsok
ENSANAG00000034241	SNRPN	73	93.750	ENSOMEG00000002066	SNRPN	96	78.707	Oryzias_melastigma
ENSANAG00000034241	SNRPN	100	100.000	ENSOGAG00000007392	SNRPN	100	100.000	Otolemur_garnettii
ENSANAG00000034241	SNRPN	100	98.750	ENSOARG00000009080	SNRPN	100	98.750	Ovis_aries
ENSANAG00000034241	SNRPN	97	69.231	ENSPPAG00000034049	-	65	79.720	Pan_paniscus
ENSANAG00000034241	SNRPN	100	100.000	ENSPPAG00000027650	SNRPN	100	100.000	Pan_paniscus
ENSANAG00000034241	SNRPN	100	99.583	ENSPPRG00000019878	-	100	99.583	Panthera_pardus
ENSANAG00000034241	SNRPN	85	64.390	ENSPPRG00000006957	-	73	70.861	Panthera_pardus
ENSANAG00000034241	SNRPN	100	99.167	ENSPTIG00000004537	SNRPN	100	99.167	Panthera_tigris_altaica
ENSANAG00000034241	SNRPN	97	69.658	ENSPTRG00000052400	-	65	80.420	Pan_troglodytes
ENSANAG00000034241	SNRPN	100	100.000	ENSPTRG00000006826	SNRPN	100	100.000	Pan_troglodytes
ENSANAG00000034241	SNRPN	100	100.000	ENSPANG00000020142	SNRPN	100	100.000	Papio_anubis
ENSANAG00000034241	SNRPN	100	100.000	ENSPEMG00000012911	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSANAG00000034241	SNRPN	89	95.794	ENSPEMG00000020979	-	89	95.775	Peromyscus_maniculatus_bairdii
ENSANAG00000034241	SNRPN	100	89.583	ENSPEMG00000013920	-	100	89.583	Peromyscus_maniculatus_bairdii
ENSANAG00000034241	SNRPN	76	97.268	ENSPCIG00000004699	-	75	89.712	Phascolarctos_cinereus
ENSANAG00000034241	SNRPN	72	93.642	ENSPMEG00000020674	SNRPN	97	78.125	Poecilia_mexicana
ENSANAG00000034241	SNRPN	100	100.000	ENSPPYG00000006269	SNURF	100	100.000	Pongo_abelii
ENSANAG00000034241	SNRPN	100	100.000	ENSPCOG00000014231	SNRPN	100	100.000	Propithecus_coquereli
ENSANAG00000034241	SNRPN	100	100.000	ENSRNOG00000059764	Snrpn	100	100.000	Rattus_norvegicus
ENSANAG00000034241	SNRPN	100	100.000	ENSRBIG00000041765	SNRPN	100	100.000	Rhinopithecus_bieti
ENSANAG00000034241	SNRPN	100	100.000	ENSRROG00000035157	SNRPN	100	100.000	Rhinopithecus_roxellana
ENSANAG00000034241	SNRPN	100	98.750	ENSSBOG00000024929	-	100	98.750	Saimiri_boliviensis_boliviensis
ENSANAG00000034241	SNRPN	100	100.000	ENSSBOG00000000110	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSANAG00000034241	SNRPN	76	97.253	ENSSHAG00000010257	-	96	89.712	Sarcophilus_harrisii
ENSANAG00000034241	SNRPN	99	77.824	ENSSARG00000000072	SNRPN	100	77.824	Sorex_araneus
ENSANAG00000034241	SNRPN	100	99.167	ENSSSCG00000028124	SNRPN	100	99.167	Sus_scrofa
ENSANAG00000034241	SNRPN	100	98.750	ENSTTRG00000010966	SNRPN	89	98.750	Tursiops_truncatus
ENSANAG00000034241	SNRPN	93	99.552	ENSUAMG00000016284	SNRPN	89	91.765	Ursus_americanus
ENSANAG00000034241	SNRPN	100	99.583	ENSUMAG00000025589	SNRPN	100	99.583	Ursus_maritimus
ENSANAG00000034241	SNRPN	95	99.563	ENSVVUG00000017971	SNRPN	98	97.083	Vulpes_vulpes