EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000034323 (Gene tree)
Gene ID: 105720813
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 27234 bases
Position: chrKZ202208.1:951504-978737
Accession: 105720813
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000033526	ResIII	PF04851.15	1.1e-08	1	1
ENSANAP00000033444	ResIII	PF04851.15	1.3e-08	1	1
ENSANAP00000033456	ResIII	PF04851.15	1.3e-08	1	1
ENSANAP00000033430	ResIII	PF04851.15	1.4e-08	1	1
ENSANAP00000033509	ResIII	PF04851.15	2.7e-08	1	1
ENSANAP00000033480	ResIII	PF04851.15	2.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000051538	CHD3-204	7327	-	ENSANAP00000033480	1948 (aa)	-	A0A2K5EJT1
ENSANAT00000051514	CHD3-203	5892	-	ENSANAP00000033456	1963 (aa)	-	A0A2K5EJW2
ENSANAT00000051502	CHD3-202	5955	-	ENSANAP00000033444	1984 (aa)	-	A0A2K5EJS5
ENSANAT00000051567	CHD3-205	6836	XM_021674707	ENSANAP00000033509	1891 (aa)	XP_021530382	A0A2K5EJZ4
ENSANAT00000051590	CHD3-207	1188	-	ENSANAP00000033532	395 (aa)	-	A0A2K5EJZ6
ENSANAT00000051488	CHD3-201	6063	-	ENSANAP00000033430	2020 (aa)	-	A0A2K5EJN1
ENSANAT00000051584	CHD3-206	5436	-	ENSANAP00000033526	1811 (aa)	-	A0A2K5EK28

Gene Model

Click here to download ENSANAG00000034323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000034323's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000034323	CHD3	92	67.606	ENSANAG00000001078	CHD5	91	70.391
ENSANAG00000034323	CHD3	50	34.728	ENSANAG00000037548	CHD6	88	42.885
ENSANAG00000034323	CHD3	94	70.980	ENSANAG00000035685	-	93	71.124

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000034323	CHD3	99	99.520	ENSG00000170004	CHD3	99	99.053	Homo_sapiens
ENSANAG00000034323	CHD3	86	80.208	ENSAPOG00000005614	chd3	94	80.208	Acanthochromis_polyacanthus
ENSANAG00000034323	CHD3	72	97.361	ENSAMEG00000003025	-	100	97.361	Ailuropoda_melanoleuca
ENSANAG00000034323	CHD3	87	78.782	ENSACIG00000019671	chd3	99	83.516	Amphilophus_citrinellus
ENSANAG00000034323	CHD3	89	81.100	ENSAOCG00000023784	chd3	97	81.250	Amphiprion_ocellaris
ENSANAG00000034323	CHD3	89	80.756	ENSAPEG00000006341	chd3	95	73.755	Amphiprion_percula
ENSANAG00000034323	CHD3	99	74.383	ENSATEG00000000848	chd3	95	82.105	Anabas_testudineus
ENSANAG00000034323	CHD3	99	85.896	ENSACAG00000004276	CHD3	96	81.332	Anolis_carolinensis
ENSANAG00000034323	CHD3	93	78.816	ENSACLG00000009222	chd3	97	74.283	Astatotilapia_calliptera
ENSANAG00000034323	CHD3	99	97.927	ENSBTAG00000014377	CHD3	100	94.660	Bos_taurus
ENSANAG00000034323	CHD3	99	99.574	ENSCJAG00000014766	CHD3	100	96.800	Callithrix_jacchus
ENSANAG00000034323	CHD3	99	98.348	ENSCAFG00000016859	CHD3	100	95.002	Canis_familiaris
ENSANAG00000034323	CHD3	99	98.348	ENSCAFG00020007422	CHD3	100	98.472	Canis_lupus_dingo
ENSANAG00000034323	CHD3	99	98.403	ENSCHIG00000016737	CHD3	100	95.604	Capra_hircus
ENSANAG00000034323	CHD3	99	99.041	ENSTSYG00000035658	CHD3	100	95.852	Carlito_syrichta
ENSANAG00000034323	CHD3	99	95.515	ENSCAPG00000014864	CHD3	99	93.619	Cavia_aperea
ENSANAG00000034323	CHD3	99	98.185	ENSCPOG00000022653	CHD3	99	94.841	Cavia_porcellus
ENSANAG00000034323	CHD3	99	99.467	ENSCCAG00000034792	CHD3	100	96.750	Cebus_capucinus
ENSANAG00000034323	CHD3	99	99.254	ENSCATG00000041717	CHD3	100	96.400	Cercocebus_atys
ENSANAG00000034323	CHD3	99	98.558	ENSCLAG00000010523	CHD3	100	95.679	Chinchilla_lanigera
ENSANAG00000034323	CHD3	99	99.041	ENSCSAG00000011122	CHD3	100	96.343	Chlorocebus_sabaeus
ENSANAG00000034323	CHD3	92	84.688	ENSCPBG00000011966	CHD3	99	86.714	Chrysemys_picta_bellii
ENSANAG00000034323	CHD3	99	99.200	ENSCANG00000037641	CHD3	100	96.350	Colobus_angolensis_palliatus
ENSANAG00000034323	CHD3	99	97.231	ENSCGRG00001011306	Chd3	100	94.312	Cricetulus_griseus_chok1gshd
ENSANAG00000034323	CHD3	93	97.619	ENSCGRG00000007878	Chd3	99	88.309	Cricetulus_griseus_crigri
ENSANAG00000034323	CHD3	92	79.605	ENSCSEG00000004489	chd3	97	76.976	Cynoglossus_semilaevis
ENSANAG00000034323	CHD3	89	82.072	ENSCVAG00000007293	chd3	95	82.996	Cyprinodon_variegatus
ENSANAG00000034323	CHD3	94	80.399	ENSDARG00000021405	chd3	99	73.927	Danio_rerio
ENSANAG00000034323	CHD3	99	82.997	ENSDNOG00000047846	CHD3	98	80.830	Dasypus_novemcinctus
ENSANAG00000034323	CHD3	99	97.710	ENSDORG00000010713	Chd3	100	95.031	Dipodomys_ordii
ENSANAG00000034323	CHD3	97	93.388	ENSETEG00000017733	CHD3	95	93.388	Echinops_telfairi
ENSANAG00000034323	CHD3	57	77.737	ENSEBUG00000008310	chd3	99	70.392	Eptatretus_burgeri
ENSANAG00000034323	CHD3	99	96.832	ENSEASG00005019360	CHD3	100	98.745	Equus_asinus_asinus
ENSANAG00000034323	CHD3	99	96.887	ENSECAG00000010051	CHD3	100	98.800	Equus_caballus
ENSANAG00000034323	CHD3	92	98.305	ENSEEUG00000015205	CHD3	92	100.000	Erinaceus_europaeus
ENSANAG00000034323	CHD3	83	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSANAG00000034323	CHD3	99	98.135	ENSFCAG00000009629	CHD3	100	94.612	Felis_catus
ENSANAG00000034323	CHD3	99	98.505	ENSFDAG00000008220	CHD3	99	94.713	Fukomys_damarensis
ENSANAG00000034323	CHD3	89	80.305	ENSGMOG00000013599	chd3	88	80.914	Gadus_morhua
ENSANAG00000034323	CHD3	59	76.744	ENSGAFG00000004055	chd3	95	78.195	Gambusia_affinis
ENSANAG00000034323	CHD3	99	72.254	ENSGACG00000019275	chd3	96	72.517	Gasterosteus_aculeatus
ENSANAG00000034323	CHD3	79	85.667	ENSGAGG00000013164	CHD3	98	86.409	Gopherus_agassizii
ENSANAG00000034323	CHD3	99	99.414	ENSGGOG00000013496	CHD3	100	96.500	Gorilla_gorilla
ENSANAG00000034323	CHD3	99	98.348	ENSHGLG00000012017	CHD3	100	95.118	Heterocephalus_glaber_female
ENSANAG00000034323	CHD3	90	91.739	ENSHGLG00100013902	CHD3	99	91.739	Heterocephalus_glaber_male
ENSANAG00000034323	CHD3	95	74.386	ENSHCOG00000010170	chd3	92	75.040	Hippocampus_comes
ENSANAG00000034323	CHD3	88	80.283	ENSIPUG00000003271	chd3	96	80.000	Ictalurus_punctatus
ENSANAG00000034323	CHD3	99	98.827	ENSSTOG00000025907	CHD3	100	96.039	Ictidomys_tridecemlineatus
ENSANAG00000034323	CHD3	99	97.445	ENSJJAG00000017633	Chd3	100	94.775	Jaculus_jaculus
ENSANAG00000034323	CHD3	87	90.047	ENSKMAG00000019292	chd3	97	74.362	Kryptolebias_marmoratus
ENSANAG00000034323	CHD3	86	81.890	ENSLBEG00000028485	chd3	90	81.890	Labrus_bergylta
ENSANAG00000034323	CHD3	97	75.710	ENSLACG00000008031	CHD3	94	75.117	Latimeria_chalumnae
ENSANAG00000034323	CHD3	99	77.921	ENSLOCG00000013965	chd3	93	77.104	Lepisosteus_oculatus
ENSANAG00000034323	CHD3	95	93.987	ENSLAFG00000000572	CHD3	100	91.362	Loxodonta_africana
ENSANAG00000034323	CHD3	99	99.200	ENSMFAG00000020113	CHD3	99	97.596	Macaca_fascicularis
ENSANAG00000034323	CHD3	99	96.695	ENSMMUG00000022221	CHD3	100	93.950	Macaca_mulatta
ENSANAG00000034323	CHD3	99	99.200	ENSMNEG00000001728	CHD3	99	98.798	Macaca_nemestrina
ENSANAG00000034323	CHD3	99	99.254	ENSMLEG00000032249	CHD3	100	96.400	Mandrillus_leucophaeus
ENSANAG00000034323	CHD3	92	73.697	ENSMAMG00000000564	chd3	99	75.747	Mastacembelus_armatus
ENSANAG00000034323	CHD3	99	96.863	ENSMAUG00000013873	Chd3	99	94.478	Mesocricetus_auratus
ENSANAG00000034323	CHD3	99	98.775	ENSMICG00000008741	CHD3	100	95.384	Microcebus_murinus
ENSANAG00000034323	CHD3	99	97.284	ENSMOCG00000004848	Chd3	100	94.764	Microtus_ochrogaster
ENSANAG00000034323	CHD3	97	75.204	ENSMMOG00000012699	chd3	97	75.095	Mola_mola
ENSANAG00000034323	CHD3	99	90.993	ENSMODG00000007509	CHD3	100	92.857	Monodelphis_domestica
ENSANAG00000034323	CHD3	99	97.074	MGP_CAROLIEiJ_G0016564	Chd3	99	92.804	Mus_caroli
ENSANAG00000034323	CHD3	99	97.181	ENSMUSG00000018474	Chd3	99	93.016	Mus_musculus
ENSANAG00000034323	CHD3	99	97.286	MGP_PahariEiJ_G0017695	Chd3	99	93.277	Mus_pahari
ENSANAG00000034323	CHD3	99	97.181	MGP_SPRETEiJ_G0017400	Chd3	99	93.175	Mus_spretus
ENSANAG00000034323	CHD3	91	98.250	ENSMPUG00000008861	CHD3	100	98.250	Mustela_putorius_furo
ENSANAG00000034323	CHD3	99	97.825	ENSMLUG00000014643	-	100	94.206	Myotis_lucifugus
ENSANAG00000034323	CHD3	99	97.816	ENSNGAG00000000773	Chd3	99	94.745	Nannospalax_galili
ENSANAG00000034323	CHD3	92	73.427	ENSNBRG00000000636	chd3	98	74.564	Neolamprologus_brichardi
ENSANAG00000034323	CHD3	99	95.225	ENSNLEG00000009770	CHD3	100	91.990	Nomascus_leucogenys
ENSANAG00000034323	CHD3	86	91.484	ENSMEUG00000005852	CHD3	87	91.484	Notamacropus_eugenii
ENSANAG00000034323	CHD3	99	96.848	ENSOPRG00000011069	CHD3	100	96.848	Ochotona_princeps
ENSANAG00000034323	CHD3	99	98.238	ENSODEG00000017785	CHD3	100	94.774	Octodon_degus
ENSANAG00000034323	CHD3	97	76.300	ENSONIG00000009292	chd3	96	75.467	Oreochromis_niloticus
ENSANAG00000034323	CHD3	99	93.620	ENSOCUG00000029299	CHD3	100	90.793	Oryctolagus_cuniculus
ENSANAG00000034323	CHD3	84	71.579	ENSORLG00000007107	chd3	85	76.256	Oryzias_latipes
ENSANAG00000034323	CHD3	57	75.233	ENSORLG00020008387	chd3	90	74.953	Oryzias_latipes_hni
ENSANAG00000034323	CHD3	74	80.243	ENSOMEG00000013691	chd3	99	76.505	Oryzias_melastigma
ENSANAG00000034323	CHD3	99	98.295	ENSOGAG00000003216	CHD3	100	95.533	Otolemur_garnettii
ENSANAG00000034323	CHD3	99	95.909	ENSOARG00000017855	CHD3	99	92.907	Ovis_aries
ENSANAG00000034323	CHD3	99	97.008	ENSPPAG00000032886	CHD3	99	95.912	Pan_paniscus
ENSANAG00000034323	CHD3	99	98.348	ENSPPRG00000000626	CHD3	100	94.711	Panthera_pardus
ENSANAG00000034323	CHD3	99	99.574	ENSPTRG00000008714	CHD3	100	96.650	Pan_troglodytes
ENSANAG00000034323	CHD3	99	99.254	ENSPANG00000023938	CHD3	99	97.650	Papio_anubis
ENSANAG00000034323	CHD3	99	76.687	ENSPKIG00000006305	chd3	97	79.334	Paramormyrops_kingsleyae
ENSANAG00000034323	CHD3	57	90.602	ENSPSIG00000010177	CHD3	98	90.876	Pelodiscus_sinensis
ENSANAG00000034323	CHD3	99	97.178	ENSPEMG00000014262	Chd3	100	93.696	Peromyscus_maniculatus_bairdii
ENSANAG00000034323	CHD3	99	93.223	ENSPCIG00000005442	CHD3	97	95.935	Phascolarctos_cinereus
ENSANAG00000034323	CHD3	97	73.874	ENSPFOG00000012464	chd3	88	75.434	Poecilia_formosa
ENSANAG00000034323	CHD3	89	83.534	ENSPLAG00000002887	chd3	96	83.534	Poecilia_latipinna
ENSANAG00000034323	CHD3	52	81.374	ENSPMEG00000016725	chd3	87	74.510	Poecilia_mexicana
ENSANAG00000034323	CHD3	91	84.502	ENSPREG00000011044	chd3	96	78.933	Poecilia_reticulata
ENSANAG00000034323	CHD3	99	96.186	ENSPPYG00000007940	CHD3	100	92.497	Pongo_abelii
ENSANAG00000034323	CHD3	96	97.750	ENSPCAG00000004350	CHD3	96	95.151	Procavia_capensis
ENSANAG00000034323	CHD3	99	98.775	ENSPCOG00000020952	CHD3	100	95.618	Propithecus_coquereli
ENSANAG00000034323	CHD3	87	98.796	ENSPVAG00000016344	CHD3	87	97.565	Pteropus_vampyrus
ENSANAG00000034323	CHD3	95	77.622	ENSPNAG00000020393	chd3	99	80.756	Pygocentrus_nattereri
ENSANAG00000034323	CHD3	97	96.841	ENSRNOG00000009722	Chd3	100	96.841	Rattus_norvegicus
ENSANAG00000034323	CHD3	99	95.897	ENSRBIG00000033562	CHD3	99	95.687	Rhinopithecus_bieti
ENSANAG00000034323	CHD3	99	97.548	ENSRROG00000029554	CHD3	99	97.149	Rhinopithecus_roxellana
ENSANAG00000034323	CHD3	99	99.680	ENSSBOG00000020719	CHD3	99	99.235	Saimiri_boliviensis_boliviensis
ENSANAG00000034323	CHD3	99	93.078	ENSSHAG00000014412	CHD3	100	91.952	Sarcophilus_harrisii
ENSANAG00000034323	CHD3	94	77.659	ENSSFOG00015023123	chd3	98	74.903	Scleropages_formosus
ENSANAG00000034323	CHD3	84	91.304	ENSSMAG00000006451	chd3	95	80.208	Scophthalmus_maximus
ENSANAG00000034323	CHD3	55	74.663	ENSSDUG00000005792	chd3	91	74.063	Seriola_dumerili
ENSANAG00000034323	CHD3	88	80.756	ENSSPAG00000013694	chd3	98	81.053	Stegastes_partitus
ENSANAG00000034323	CHD3	99	98.243	ENSSSCG00000021363	CHD3	100	98.364	Sus_scrofa
ENSANAG00000034323	CHD3	76	77.869	ENSTRUG00000014990	chd3	86	78.144	Takifugu_rubripes
ENSANAG00000034323	CHD3	99	73.506	ENSTNIG00000012998	chd3	96	73.793	Tetraodon_nigroviridis
ENSANAG00000034323	CHD3	69	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSANAG00000034323	CHD3	99	99.468	ENSTTRG00000010295	CHD3	97	96.451	Tursiops_truncatus
ENSANAG00000034323	CHD3	97	97.278	ENSUAMG00000005475	CHD3	99	97.278	Ursus_americanus
ENSANAG00000034323	CHD3	60	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSANAG00000034323	CHD3	99	98.348	ENSVVUG00000028011	CHD3	99	98.348	Vulpes_vulpes
ENSANAG00000034323	CHD3	99	74.094	ENSXETG00000012991	chd3	92	73.634	Xenopus_tropicalis
ENSANAG00000034323	CHD3	50	82.864	ENSXCOG00000000809	chd3	89	83.089	Xiphophorus_couchianus
ENSANAG00000034323	CHD3	87	82.967	ENSXMAG00000016035	chd3	99	82.967	Xiphophorus_maculatus