EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSANAG00000034409 (Gene tree)
Gene ID
105723371
Gene Symbol
-
Alias
-
Full Name
LSM5 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Aotus_nancymaae
Status
putative
Strand
Minus strand
Length
5754 bases
Position
chrKZ208688.1:48835-54588
Accession
105723371
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSANAP00000033478LSMPF01423.223.6e-2011
ENSANAP00000033488LSMPF01423.222.2e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSANAT00000051546-195-ENSANAP0000003348864 (aa)-A0A2K5EJU9
ENSANAT00000051536-2949XM_012461326ENSANAP0000003347891 (aa)XP_012316749A0A2K5EJT9
Gene Model
Click here to download ENSANAG00000034409's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000034409's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSANAG00000034409-8234.667ENSANAG00000034627LSM37434.667
ENSANAG00000034409-7632.877ENSANAG00000036379SNRPE7732.877
ENSANAG00000034409-9996.667ENSANAG00000024192-9496.667
ENSANAG00000034409-10078.022ENSANAG00000037758-10078.022
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSANAG00000034409-10098.901ENSG00000106355LSM5100100.000Homo_sapiens
ENSANAG00000034409-9093.902ENSAPOG00000011743LSM510096.774Acanthochromis_polyacanthus
ENSANAG00000034409-10094.505ENSAPOG00000020779LSM510094.505Acanthochromis_polyacanthus
ENSANAG00000034409-10098.901ENSAMEG00000006700LSM510098.901Ailuropoda_melanoleuca
ENSANAG00000034409-9659.770ENSACIG00000019185lsm59859.770Amphilophus_citrinellus
ENSANAG00000034409-10094.505ENSAOCG00000001636lsm510094.505Amphiprion_ocellaris
ENSANAG00000034409-10094.505ENSAPEG00000008151lsm510094.505Amphiprion_percula
ENSANAG00000034409-6896.774ENSAPEG00000008201lsm510096.774Amphiprion_percula
ENSANAG00000034409-9095.122ENSATEG00000020470lsm510060.440Anabas_testudineus
ENSANAG00000034409-81100.000ENSAPLG00000008171LSM5100100.000Anas_platyrhynchos
ENSANAG00000034409-8190.385ENSACAG00000009530LSM59398.214Anolis_carolinensis
ENSANAG00000034409-9696.552ENSACLG00000012891lsm59996.552Astatotilapia_calliptera
ENSANAG00000034409-10082.979ENSAMXG00000035543lsm510082.979Astyanax_mexicanus
ENSANAG00000034409-10098.901ENSBTAG00000002332LSM510098.901Bos_taurus
ENSANAG00000034409-9767.742ENSBTAG00000052014-7567.742Bos_taurus
ENSANAG00000034409-10073.626WBGene00003079lsm-510073.626Caenorhabditis_elegans
ENSANAG00000034409-9985.556ENSCJAG00000005678-10085.556Callithrix_jacchus
ENSANAG00000034409-10098.901ENSCJAG00000047379LSM510096.875Callithrix_jacchus
ENSANAG00000034409-8196.154ENSCAFG00000030781-6096.154Canis_familiaris
ENSANAG00000034409-10097.802ENSCAFG00000019261-10097.802Canis_familiaris
ENSANAG00000034409-10098.901ENSCAFG00020004946LSM510098.901Canis_lupus_dingo
ENSANAG00000034409-10098.901ENSCHIG00000024539LSM510098.901Capra_hircus
ENSANAG00000034409-10096.703ENSCHIG00000004079-10096.703Capra_hircus
ENSANAG00000034409-8174.324ENSCHIG00000021428-9571.591Capra_hircus
ENSANAG00000034409-10098.901ENSTSYG00000006449-10098.901Carlito_syrichta
ENSANAG00000034409-10085.714ENSTSYG00000028728-10085.714Carlito_syrichta
ENSANAG00000034409-10080.220ENSTSYG00000026530-9180.220Carlito_syrichta
ENSANAG00000034409-10073.626ENSTSYG00000036637-10073.626Carlito_syrichta
ENSANAG00000034409-8292.000ENSCAPG00000006980LSM510092.000Cavia_aperea
ENSANAG00000034409-10098.901ENSCPOG00000036386LSM510098.901Cavia_porcellus
ENSANAG00000034409-10067.033ENSCCAG00000037334-10067.033Cebus_capucinus
ENSANAG00000034409-10098.901ENSCCAG00000037808-10098.901Cebus_capucinus
ENSANAG00000034409-10080.220ENSCCAG00000032792-10080.220Cebus_capucinus
ENSANAG00000034409-10096.703ENSCCAG00000032123-10096.703Cebus_capucinus
ENSANAG00000034409-10097.802ENSCCAG00000000821-10097.802Cebus_capucinus
ENSANAG00000034409-9987.778ENSCATG00000014790-9596.364Cercocebus_atys
ENSANAG00000034409-10098.901ENSCATG00000040218LSM5100100.000Cercocebus_atys
ENSANAG00000034409-10098.901ENSCLAG00000000202LSM510098.901Chinchilla_lanigera
ENSANAG00000034409-10082.418ENSCLAG00000005062-9082.418Chinchilla_lanigera
ENSANAG00000034409-8298.667ENSCHOG00000005335LSM59998.667Choloepus_hoffmanni
ENSANAG00000034409-10098.901ENSCPBG00000013685LSM510098.901Chrysemys_picta_bellii
ENSANAG00000034409-9889.888ENSCING00000020625-9989.888Ciona_intestinalis
ENSANAG00000034409-9589.535ENSCSAVG00000001439-9889.535Ciona_savignyi
ENSANAG00000034409-10098.901ENSCANG00000039909LSM5100100.000Colobus_angolensis_palliatus
ENSANAG00000034409-10098.901ENSCGRG00001015461Lsm510098.901Cricetulus_griseus_chok1gshd
ENSANAG00000034409-82100.000ENSCGRG00000007677Lsm5100100.000Cricetulus_griseus_crigri
ENSANAG00000034409-10058.242ENSCSEG00000015286lsm510058.242Cynoglossus_semilaevis
ENSANAG00000034409-10095.604ENSCVAG00000004262lsm510095.604Cyprinodon_variegatus
ENSANAG00000034409-10095.604ENSDARG00000071573lsm510096.774Danio_rerio
ENSANAG00000034409-9688.506ENSDNOG00000049495-9688.506Dasypus_novemcinctus
ENSANAG00000034409-10098.901ENSDNOG00000034958LSM510098.901Dasypus_novemcinctus
ENSANAG00000034409-10098.901ENSDORG00000009422Lsm510098.901Dipodomys_ordii
ENSANAG00000034409-9581.395FBgn0035675CG66109581.395Drosophila_melanogaster
ENSANAG00000034409-10098.901ENSETEG00000018068LSM510098.901Echinops_telfairi
ENSANAG00000034409-10079.121ENSETEG00000010651-10079.121Echinops_telfairi
ENSANAG00000034409-9976.667ENSETEG00000001469-9976.667Echinops_telfairi
ENSANAG00000034409-9866.292ENSETEG00000000777-9966.292Echinops_telfairi
ENSANAG00000034409-8181.081ENSETEG00000016074-9881.081Echinops_telfairi
ENSANAG00000034409-10090.110ENSEBUG00000008540lsm510090.110Eptatretus_burgeri
ENSANAG00000034409-10098.901ENSEASG00005003500LSM510098.901Equus_asinus_asinus
ENSANAG00000034409-10084.615ENSECAG00000018445LSM510084.615Equus_caballus
ENSANAG00000034409-6394.737ENSEEUG00000004102LSM59594.737Erinaceus_europaeus
ENSANAG00000034409-10095.604ENSELUG00000007792lsm510095.604Esox_lucius
ENSANAG00000034409-10098.901ENSFCAG00000000230LSM510098.901Felis_catus
ENSANAG00000034409-84100.000ENSFALG00000001892LSM592100.000Ficedula_albicollis
ENSANAG00000034409-10065.934ENSFDAG00000008685-10065.934Fukomys_damarensis
ENSANAG00000034409-10098.901ENSFDAG00000008767LSM510098.901Fukomys_damarensis
ENSANAG00000034409-9976.667ENSFHEG00000004011lsm59479.310Fundulus_heteroclitus
ENSANAG00000034409-9995.556ENSGMOG00000018235lsm510095.556Gadus_morhua
ENSANAG00000034409-10098.901ENSGALG00000041625LSM510098.901Gallus_gallus
ENSANAG00000034409-6896.774ENSGAFG00000016824lsm510096.774Gambusia_affinis
ENSANAG00000034409-10094.505ENSGACG00000005528lsm510094.505Gasterosteus_aculeatus
ENSANAG00000034409-10098.901ENSGAGG00000015593LSM510098.901Gopherus_agassizii
ENSANAG00000034409-10098.901ENSGGOG00000043469LSM510098.901Gorilla_gorilla
ENSANAG00000034409-9696.552ENSHBUG00000013773lsm59996.552Haplochromis_burtoni
ENSANAG00000034409-10098.901ENSHGLG00000011765LSM510098.901Heterocephalus_glaber_female
ENSANAG00000034409-10095.604ENSHGLG00100015610LSM510095.604Heterocephalus_glaber_male
ENSANAG00000034409-10060.440ENSHCOG00000008288lsm510060.440Hippocampus_comes
ENSANAG00000034409-10094.505ENSIPUG00000021095LSM510094.505Ictalurus_punctatus
ENSANAG00000034409-9679.775ENSSTOG00000033886-10079.775Ictidomys_tridecemlineatus
ENSANAG00000034409-10098.901ENSSTOG00000012662LSM510098.901Ictidomys_tridecemlineatus
ENSANAG00000034409-8789.873ENSJJAG00000004475-10089.873Jaculus_jaculus
ENSANAG00000034409-10070.330ENSJJAG00000016144-9270.330Jaculus_jaculus
ENSANAG00000034409-10096.703ENSJJAG00000012145-10096.703Jaculus_jaculus
ENSANAG00000034409-10093.407ENSKMAG00000021861lsm510093.407Kryptolebias_marmoratus
ENSANAG00000034409-8392.453ENSLBEG00000017379lsm58792.453Labrus_bergylta
ENSANAG00000034409-10087.912ENSLBEG00000009235LSM57087.912Labrus_bergylta
ENSANAG00000034409-10096.703ENSLACG00000022448LSM510096.703Latimeria_chalumnae
ENSANAG00000034409-10095.604ENSLOCG00000012903lsm510095.604Lepisosteus_oculatus
ENSANAG00000034409-10072.527ENSLAFG00000027938-10072.527Loxodonta_africana
ENSANAG00000034409-10098.901ENSLAFG00000029579LSM510098.901Loxodonta_africana
ENSANAG00000034409-10098.901ENSMFAG00000038508LSM510098.901Macaca_fascicularis
ENSANAG00000034409-10095.604ENSMFAG00000030152-10095.604Macaca_fascicularis
ENSANAG00000034409-9879.365ENSMFAG00000031187-8195.833Macaca_fascicularis
ENSANAG00000034409-10096.875ENSMMUG00000045129-10096.875Macaca_mulatta
ENSANAG00000034409-10095.604ENSMMUG00000030131-10095.604Macaca_mulatta
ENSANAG00000034409-9988.889ENSMMUG00000039822-10088.889Macaca_mulatta
ENSANAG00000034409-10095.604ENSMNEG00000037935-10095.604Macaca_nemestrina
ENSANAG00000034409-10098.901ENSMNEG00000015331LSM5100100.000Macaca_nemestrina
ENSANAG00000034409-9887.640ENSMLEG00000034037-10087.640Mandrillus_leucophaeus
ENSANAG00000034409-10098.901ENSMLEG00000024945LSM510098.901Mandrillus_leucophaeus
ENSANAG00000034409-10090.110ENSMAMG00000012869lsm510090.110Mastacembelus_armatus
ENSANAG00000034409-9696.552ENSMZEG00005019554lsm59996.552Maylandia_zebra
ENSANAG00000034409-10098.901ENSMGAG00000012117LSM510098.901Meleagris_gallopavo
ENSANAG00000034409-10097.802ENSMAUG00000008132-10097.802Mesocricetus_auratus
ENSANAG00000034409-10098.901ENSMAUG00000012222Lsm510098.901Mesocricetus_auratus
ENSANAG00000034409-10098.901ENSMICG00000005353LSM510098.901Microcebus_murinus
ENSANAG00000034409-9976.667ENSMICG00000033928-9676.667Microcebus_murinus
ENSANAG00000034409-10098.901ENSMOCG00000012018Lsm510098.901Microtus_ochrogaster
ENSANAG00000034409-8497.368ENSMMOG00000004026lsm58797.368Mola_mola
ENSANAG00000034409-68100.000ENSMODG00000013274-100100.000Monodelphis_domestica
ENSANAG00000034409-6891.935ENSMALG00000010343lsm510091.935Monopterus_albus
ENSANAG00000034409-10098.901MGP_CAROLIEiJ_G0028421Lsm510098.901Mus_caroli
ENSANAG00000034409-10098.901ENSMUSG00000091625Lsm510098.901Mus_musculus
ENSANAG00000034409-10098.901MGP_PahariEiJ_G0022171Lsm510098.901Mus_pahari
ENSANAG00000034409-10098.901MGP_SPRETEiJ_G0029423Lsm510098.901Mus_spretus
ENSANAG00000034409-10098.901ENSMLUG00000017028LSM510098.901Myotis_lucifugus
ENSANAG00000034409-10098.901ENSNGAG00000024142Lsm510098.901Nannospalax_galili
ENSANAG00000034409-9977.778ENSNGAG00000022569-9677.778Nannospalax_galili
ENSANAG00000034409-10086.022ENSNGAG00000017707-10086.022Nannospalax_galili
ENSANAG00000034409-7293.478ENSNBRG00000009964LSM59893.478Neolamprologus_brichardi
ENSANAG00000034409-6396.491ENSNBRG00000011386lsm57696.491Neolamprologus_brichardi
ENSANAG00000034409-10098.901ENSNLEG00000015268LSM510098.901Nomascus_leucogenys
ENSANAG00000034409-82100.000ENSOPRG00000002443LSM5100100.000Ochotona_princeps
ENSANAG00000034409-10098.901ENSODEG00000019072-10098.901Octodon_degus
ENSANAG00000034409-10098.901ENSODEG00000008258-10098.901Octodon_degus
ENSANAG00000034409-8261.333ENSOANG00000014540-10061.333Ornithorhynchus_anatinus
ENSANAG00000034409-10098.901ENSOCUG00000029043LSM510098.901Oryctolagus_cuniculus
ENSANAG00000034409-10093.407ENSORLG00000027725lsm55893.407Oryzias_latipes
ENSANAG00000034409-9690.805ENSORLG00020003019lsm58690.805Oryzias_latipes_hni
ENSANAG00000034409-10093.407ENSORLG00015003338lsm510093.407Oryzias_latipes_hsok
ENSANAG00000034409-10092.308ENSOMEG00000001078lsm510092.308Oryzias_melastigma
ENSANAG00000034409-10098.901ENSOGAG00000013892LSM510098.901Otolemur_garnettii
ENSANAG00000034409-10098.901ENSOARG00000006944LSM510098.901Ovis_aries
ENSANAG00000034409-10098.901ENSPPAG00000003697-10098.901Pan_paniscus
ENSANAG00000034409-10098.901ENSPPRG00000002550LSM510098.901Panthera_pardus
ENSANAG00000034409-10098.901ENSPTIG00000015604LSM510098.901Panthera_tigris_altaica
ENSANAG00000034409-10082.418ENSPTRG00000049488-10084.615Pan_troglodytes
ENSANAG00000034409-10098.901ENSPTRG00000019057LSM510098.901Pan_troglodytes
ENSANAG00000034409-10094.505ENSPANG00000033477-10094.505Papio_anubis
ENSANAG00000034409-9988.889ENSPANG00000032538-10088.889Papio_anubis
ENSANAG00000034409-10098.901ENSPANG00000032179-10098.901Papio_anubis
ENSANAG00000034409-10095.604ENSPKIG00000011910lsm510095.604Paramormyrops_kingsleyae
ENSANAG00000034409-81100.000ENSPSIG00000014796LSM5100100.000Pelodiscus_sinensis
ENSANAG00000034409-6896.774ENSPMGG00000011699lsm510096.774Periophthalmus_magnuspinnatus
ENSANAG00000034409-10071.429ENSPEMG00000022375-10071.429Peromyscus_maniculatus_bairdii
ENSANAG00000034409-10087.500ENSPEMG00000019994-10087.500Peromyscus_maniculatus_bairdii
ENSANAG00000034409-10095.604ENSPFOG00000001433lsm510095.604Poecilia_formosa
ENSANAG00000034409-10095.604ENSPLAG00000009665lsm510095.604Poecilia_latipinna
ENSANAG00000034409-10095.604ENSPMEG00000022265lsm510095.604Poecilia_mexicana
ENSANAG00000034409-6896.774ENSPREG00000022452lsm510096.774Poecilia_reticulata
ENSANAG00000034409-10095.604ENSPPYG00000017661LSM510095.604Pongo_abelii
ENSANAG00000034409-8998.765ENSPCAG00000013740LSM510098.765Procavia_capensis
ENSANAG00000034409-10098.901ENSPVAG00000009786LSM510098.901Pteropus_vampyrus
ENSANAG00000034409-9696.552ENSPNYG00000022236lsm59996.552Pundamilia_nyererei
ENSANAG00000034409-10094.505ENSPNAG00000001887lsm510094.505Pygocentrus_nattereri
ENSANAG00000034409-10094.565ENSRNOG00000027305AABR07065089.110094.565Rattus_norvegicus
ENSANAG00000034409-10098.901ENSRNOG00000042126Lsm510098.901Rattus_norvegicus
ENSANAG00000034409-10098.901ENSRBIG00000030340-10098.901Rhinopithecus_bieti
ENSANAG00000034409-10097.802ENSRBIG00000024431-10097.802Rhinopithecus_bieti
ENSANAG00000034409-10098.901ENSRBIG00000027803-100100.000Rhinopithecus_bieti
ENSANAG00000034409-10098.901ENSRBIG00000030714-10098.901Rhinopithecus_bieti
ENSANAG00000034409-10098.901ENSRROG00000042782-100100.000Rhinopithecus_roxellana
ENSANAG00000034409-10098.901ENSRROG00000004655-10098.901Rhinopithecus_roxellana
ENSANAG00000034409-10098.901ENSRROG00000023884-10098.901Rhinopithecus_roxellana
ENSANAG00000034409-8551.220YER146W-8851.220Saccharomyces_cerevisiae
ENSANAG00000034409-10076.923ENSSBOG00000034794-10076.923Saimiri_boliviensis_boliviensis
ENSANAG00000034409-10096.703ENSSBOG00000019124-10096.703Saimiri_boliviensis_boliviensis
ENSANAG00000034409-10098.901ENSSBOG00000012312LSM510098.901Saimiri_boliviensis_boliviensis
ENSANAG00000034409-10095.604ENSSFOG00015010099lsm510095.604Scleropages_formosus
ENSANAG00000034409-10059.341ENSSMAG00000007895lsm510059.341Scophthalmus_maximus
ENSANAG00000034409-6896.774ENSSDUG00000010762lsm510096.774Seriola_dumerili
ENSANAG00000034409-10095.604ENSSLDG00000025242lsm510095.604Seriola_lalandi_dorsalis
ENSANAG00000034409-8678.205ENSSLDG00000008014-9378.205Seriola_lalandi_dorsalis
ENSANAG00000034409-10070.330ENSSARG00000003330LSM510070.330Sorex_araneus
ENSANAG00000034409-10096.703ENSSPUG00000002690LSM510098.387Sphenodon_punctatus
ENSANAG00000034409-10059.341ENSSPAG00000005435lsm510059.341Stegastes_partitus
ENSANAG00000034409-7888.000ENSSSCG00000029661-9688.406Sus_scrofa
ENSANAG00000034409-10098.901ENSSSCG00000026064-10098.901Sus_scrofa
ENSANAG00000034409-10096.703ENSTGUG00000017539LSM510096.703Taeniopygia_guttata
ENSANAG00000034409-8689.157ENSTRUG00000017749lsm56489.157Takifugu_rubripes
ENSANAG00000034409-9696.552ENSTNIG00000008695lsm59996.552Tetraodon_nigroviridis
ENSANAG00000034409-10098.901ENSTBEG00000004876LSM510098.901Tupaia_belangeri
ENSANAG00000034409-10098.901ENSTTRG00000004237LSM510098.901Tursiops_truncatus
ENSANAG00000034409-8198.077ENSUAMG00000009786LSM56898.077Ursus_americanus
ENSANAG00000034409-10097.802ENSUMAG00000002625LSM56597.802Ursus_maritimus
ENSANAG00000034409-10098.901ENSVPAG00000009985LSM510098.901Vicugna_pacos
ENSANAG00000034409-10098.901ENSVVUG00000021311LSM510098.901Vulpes_vulpes
ENSANAG00000034409-9093.902ENSXETG00000026465lsm510093.902Xenopus_tropicalis
ENSANAG00000034409-6896.774ENSXCOG00000015348lsm510096.774Xiphophorus_couchianus
ENSANAG00000034409-10095.604ENSXMAG00000029988lsm510095.604Xiphophorus_maculatus

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