EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000034457 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: 40S ribosomal protein S3a pseudogene
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 1750 bases
Position: chrKZ197012.1:20782119-20783868
Accession: 105717379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000033568	Ribosomal_S3Ae	PF01015.18	9.9e-80	1	1
ENSANAP00000033566	Ribosomal_S3Ae	PF01015.18	1.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000051627	-	603	-	ENSANAP00000033568	200 (aa)	-	A0A2K5EK20
ENSANAT00000051625	-	300	-	ENSANAP00000033566	99 (aa)	-	A0A2K5EK66

Gene Model

Click here to download ENSANAG00000034457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000034457's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000034457	-	96	95.833	ENSANAG00000008213	-	70	96.739
ENSANAG00000034457	-	96	89.583	ENSANAG00000022395	-	100	81.500
ENSANAG00000034457	-	96	91.667	ENSANAG00000003708	-	70	95.109
ENSANAG00000034457	-	96	96.875	ENSANAG00000022955	RPS3A	70	98.370
ENSANAG00000034457	-	96	92.708	ENSANAG00000030036	-	89	94.624
ENSANAG00000034457	-	95	96.809	ENSANAG00000028100	-	81	97.826
ENSANAG00000034457	-	92	95.109	ENSANAG00000019923	-	70	95.109
ENSANAG00000034457	-	96	91.667	ENSANAG00000037982	-	69	88.043
ENSANAG00000034457	-	96	93.750	ENSANAG00000005361	-	72	95.109
ENSANAG00000034457	-	93	91.304	ENSANAG00000030718	-	100	80.000
ENSANAG00000034457	-	96	90.625	ENSANAG00000034641	-	100	84.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000034457	-	100	97.000	ENSCAPG00000011956	-	100	97.000	Cavia_aperea
ENSANAG00000034457	-	100	93.500	ENSCCAG00000032295	-	100	93.500	Cebus_capucinus
ENSANAG00000034457	-	100	94.000	ENSCANG00000032048	-	100	94.000	Colobus_angolensis_palliatus
ENSANAG00000034457	-	100	88.500	ENSGGOG00000028270	-	100	88.500	Gorilla_gorilla
ENSANAG00000034457	-	100	96.500	ENSMMUG00000009272	-	99	97.872	Macaca_mulatta
ENSANAG00000034457	-	99	93.970	ENSMNEG00000043648	-	96	93.970	Macaca_nemestrina
ENSANAG00000034457	-	99	94.472	ENSMLEG00000034553	-	96	94.472	Mandrillus_leucophaeus
ENSANAG00000034457	-	99	96.482	ENSODEG00000009407	-	99	96.482	Octodon_degus
ENSANAG00000034457	-	100	95.000	ENSPPAG00000034286	-	100	95.000	Pan_paniscus
ENSANAG00000034457	-	100	97.000	ENSPPAG00000005749	-	100	97.000	Pan_paniscus
ENSANAG00000034457	-	93	59.140	YML063W	RPS1B	73	58.511	Saccharomyces_cerevisiae
ENSANAG00000034457	-	93	63.441	YLR441C	RPS1A	73	57.979	Saccharomyces_cerevisiae
ENSANAG00000034457	-	95	65.263	ENSSLDG00000011590	-	74	64.324	Seriola_lalandi_dorsalis
ENSANAG00000034457	-	96	96.875	ENSVVUG00000025107	-	92	98.370	Vulpes_vulpes