EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000034463 (Gene tree)
Gene ID: 105732028
Gene Symbol: SND1
Alias: TDRD11|p100
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 443685 bases
Position: chrKZ196472.1:8672796-9116480
Accession: 105732028
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000033989	TUDOR	PF00567.24	1.1e-27	1	1
ENSANAP00000033973	TUDOR	PF00567.24	1.2e-27	1	1
ENSANAP00000033969	TUDOR	PF00567.24	1.2e-27	1	1
ENSANAP00000033973	SNase	PF00565.17	3.7e-69	1	5
ENSANAP00000033973	SNase	PF00565.17	3.7e-69	2	5
ENSANAP00000033973	SNase	PF00565.17	3.7e-69	3	5
ENSANAP00000033973	SNase	PF00565.17	3.7e-69	4	5
ENSANAP00000033973	SNase	PF00565.17	3.7e-69	5	5
ENSANAP00000033969	SNase	PF00565.17	4.1e-69	1	5
ENSANAP00000033969	SNase	PF00565.17	4.1e-69	2	5
ENSANAP00000033969	SNase	PF00565.17	4.1e-69	3	5
ENSANAP00000033969	SNase	PF00565.17	4.1e-69	4	5
ENSANAP00000033969	SNase	PF00565.17	4.1e-69	5	5
ENSANAP00000033989	SNase	PF00565.17	2.9e-60	1	5
ENSANAP00000033989	SNase	PF00565.17	2.9e-60	2	5
ENSANAP00000033989	SNase	PF00565.17	2.9e-60	3	5
ENSANAP00000033989	SNase	PF00565.17	2.9e-60	4	5
ENSANAP00000033989	SNase	PF00565.17	2.9e-60	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000052036	SND1-202	2685	-	ENSANAP00000033973	894 (aa)	-	A0A2K5EL70
ENSANAT00000052032	SND1-201	2952	XM_012473984	ENSANAP00000033969	910 (aa)	XP_012329407	A0A2K5ELA7
ENSANAT00000052052	SND1-203	2622	-	ENSANAP00000033989	873 (aa)	-	A0A2K5ELC5

Gene Model

Click here to download ENSANAG00000034463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000034463's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000034463	SND1	100	99.121	ENSG00000197157	SND1	100	99.121	Homo_sapiens
ENSANAG00000034463	SND1	99	84.876	ENSAPOG00000017599	snd1	99	84.650	Acanthochromis_polyacanthus
ENSANAG00000034463	SND1	100	98.794	ENSAMEG00000004664	SND1	94	98.794	Ailuropoda_melanoleuca
ENSANAG00000034463	SND1	99	82.034	ENSACIG00000003551	snd1	99	81.960	Amphilophus_citrinellus
ENSANAG00000034463	SND1	99	84.650	ENSAOCG00000014166	snd1	99	84.427	Amphiprion_ocellaris
ENSANAG00000034463	SND1	99	84.650	ENSAPEG00000007067	snd1	99	84.427	Amphiprion_percula
ENSANAG00000034463	SND1	97	84.120	ENSATEG00000018475	snd1	88	84.151	Anabas_testudineus
ENSANAG00000034463	SND1	99	84.312	ENSACLG00000022897	snd1	99	84.076	Astatotilapia_calliptera
ENSANAG00000034463	SND1	99	84.910	ENSAMXG00000016318	snd1	98	84.855	Astyanax_mexicanus
ENSANAG00000034463	SND1	100	98.901	ENSBTAG00000010692	SND1	100	98.901	Bos_taurus
ENSANAG00000034463	SND1	99	45.991	WBGene00006626	tsn-1	98	47.091	Caenorhabditis_elegans
ENSANAG00000034463	SND1	100	99.341	ENSCJAG00000017668	SND1	100	99.341	Callithrix_jacchus
ENSANAG00000034463	SND1	100	99.231	ENSCAFG00000001700	SND1	100	99.231	Canis_familiaris
ENSANAG00000034463	SND1	100	99.231	ENSCAFG00020021639	SND1	100	99.231	Canis_lupus_dingo
ENSANAG00000034463	SND1	100	99.231	ENSCHIG00000023390	SND1	100	99.231	Capra_hircus
ENSANAG00000034463	SND1	75	98.774	ENSTSYG00000004979	SND1	96	99.120	Carlito_syrichta
ENSANAG00000034463	SND1	99	86.728	ENSCAPG00000010677	SND1	97	86.728	Cavia_aperea
ENSANAG00000034463	SND1	100	98.352	ENSCPOG00000006251	SND1	100	98.352	Cavia_porcellus
ENSANAG00000034463	SND1	100	99.771	ENSCCAG00000036847	SND1	100	99.771	Cebus_capucinus
ENSANAG00000034463	SND1	100	99.341	ENSCATG00000035214	SND1	100	99.341	Cercocebus_atys
ENSANAG00000034463	SND1	100	98.242	ENSCLAG00000011796	SND1	100	98.242	Chinchilla_lanigera
ENSANAG00000034463	SND1	100	99.341	ENSCSAG00000010182	SND1	100	99.341	Chlorocebus_sabaeus
ENSANAG00000034463	SND1	73	98.000	ENSCHOG00000002218	SND1	80	98.000	Choloepus_hoffmanni
ENSANAG00000034463	SND1	99	92.986	ENSCPBG00000018094	SND1	98	92.937	Chrysemys_picta_bellii
ENSANAG00000034463	SND1	100	55.902	ENSCING00000000524	-	98	57.032	Ciona_intestinalis
ENSANAG00000034463	SND1	99	57.978	ENSCSAVG00000008807	-	99	58.122	Ciona_savignyi
ENSANAG00000034463	SND1	100	99.341	ENSCANG00000035119	SND1	100	99.341	Colobus_angolensis_palliatus
ENSANAG00000034463	SND1	100	97.473	ENSCGRG00001022514	Snd1	100	97.473	Cricetulus_griseus_chok1gshd
ENSANAG00000034463	SND1	99	97.511	ENSCGRG00000012277	Snd1	99	97.511	Cricetulus_griseus_crigri
ENSANAG00000034463	SND1	99	84.199	ENSCSEG00000008661	snd1	98	84.228	Cynoglossus_semilaevis
ENSANAG00000034463	SND1	99	85.214	ENSCVAG00000010316	snd1	100	83.678	Cyprinodon_variegatus
ENSANAG00000034463	SND1	99	85.569	ENSDARG00000006766	snd1	97	87.410	Danio_rerio
ENSANAG00000034463	SND1	99	96.163	ENSDNOG00000006795	SND1	100	96.167	Dasypus_novemcinctus
ENSANAG00000034463	SND1	100	98.791	ENSDORG00000000336	Snd1	100	98.791	Dipodomys_ordii
ENSANAG00000034463	SND1	98	50.714	FBgn0035121	Tudor-SN	98	50.703	Drosophila_melanogaster
ENSANAG00000034463	SND1	92	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSANAG00000034463	SND1	58	65.879	ENSEBUG00000014201	-	84	75.410	Eptatretus_burgeri
ENSANAG00000034463	SND1	100	97.624	ENSEASG00005008513	SND1	100	97.624	Equus_asinus_asinus
ENSANAG00000034463	SND1	100	99.231	ENSECAG00000011451	SND1	100	99.231	Equus_caballus
ENSANAG00000034463	SND1	100	86.813	ENSEEUG00000014737	SND1	100	86.813	Erinaceus_europaeus
ENSANAG00000034463	SND1	99	83.296	ENSELUG00000001805	snd1	95	83.166	Esox_lucius
ENSANAG00000034463	SND1	100	99.231	ENSFCAG00000008289	SND1	100	99.231	Felis_catus
ENSANAG00000034463	SND1	100	98.462	ENSFDAG00000015881	SND1	100	98.462	Fukomys_damarensis
ENSANAG00000034463	SND1	99	82.892	ENSFHEG00000004093	snd1	97	84.633	Fundulus_heteroclitus
ENSANAG00000034463	SND1	55	90.323	ENSGMOG00000018932	snd1	57	90.323	Gadus_morhua
ENSANAG00000034463	SND1	99	85.214	ENSGAFG00000008421	snd1	99	85.214	Gambusia_affinis
ENSANAG00000034463	SND1	100	53.855	ENSGACG00000019793	snd1	98	54.314	Gasterosteus_aculeatus
ENSANAG00000034463	SND1	100	99.341	ENSGGOG00000009614	SND1	100	99.341	Gorilla_gorilla
ENSANAG00000034463	SND1	99	84.312	ENSHBUG00000019135	snd1	99	84.076	Haplochromis_burtoni
ENSANAG00000034463	SND1	100	98.132	ENSHGLG00000003618	SND1	100	98.132	Heterocephalus_glaber_female
ENSANAG00000034463	SND1	99	98.077	ENSHGLG00100012449	SND1	100	97.680	Heterocephalus_glaber_male
ENSANAG00000034463	SND1	99	83.973	ENSHCOG00000005266	snd1	98	84.004	Hippocampus_comes
ENSANAG00000034463	SND1	99	83.784	ENSIPUG00000013279	snd1	98	83.742	Ictalurus_punctatus
ENSANAG00000034463	SND1	100	98.791	ENSSTOG00000002140	SND1	100	98.791	Ictidomys_tridecemlineatus
ENSANAG00000034463	SND1	100	98.901	ENSJJAG00000009561	Snd1	100	98.901	Jaculus_jaculus
ENSANAG00000034463	SND1	100	83.991	ENSKMAG00000016997	snd1	98	85.011	Kryptolebias_marmoratus
ENSANAG00000034463	SND1	99	86.316	ENSLBEG00000013563	snd1	99	83.426	Labrus_bergylta
ENSANAG00000034463	SND1	99	85.794	ENSLOCG00000015537	snd1	98	85.557	Lepisosteus_oculatus
ENSANAG00000034463	SND1	100	98.242	ENSLAFG00000009696	SND1	100	98.242	Loxodonta_africana
ENSANAG00000034463	SND1	100	99.341	ENSMFAG00000038114	SND1	100	99.341	Macaca_fascicularis
ENSANAG00000034463	SND1	100	99.341	ENSMMUG00000015432	SND1	100	99.341	Macaca_mulatta
ENSANAG00000034463	SND1	100	99.341	ENSMNEG00000039808	SND1	100	99.341	Macaca_nemestrina
ENSANAG00000034463	SND1	100	99.231	ENSMLEG00000029040	SND1	100	99.231	Mandrillus_leucophaeus
ENSANAG00000034463	SND1	99	84.537	ENSMAMG00000011739	snd1	98	84.487	Mastacembelus_armatus
ENSANAG00000034463	SND1	99	84.312	ENSMZEG00005005681	snd1	99	84.076	Maylandia_zebra
ENSANAG00000034463	SND1	100	99.121	ENSMICG00000000097	SND1	100	99.121	Microcebus_murinus
ENSANAG00000034463	SND1	100	98.352	ENSMOCG00000005040	Snd1	100	98.352	Microtus_ochrogaster
ENSANAG00000034463	SND1	99	84.424	ENSMMOG00000001795	snd1	99	84.205	Mola_mola
ENSANAG00000034463	SND1	99	96.041	ENSMODG00000015182	SND1	99	95.875	Monodelphis_domestica
ENSANAG00000034463	SND1	100	83.224	ENSMALG00000012071	snd1	98	84.040	Monopterus_albus
ENSANAG00000034463	SND1	100	98.022	MGP_CAROLIEiJ_G0028159	Snd1	100	98.022	Mus_caroli
ENSANAG00000034463	SND1	100	97.802	ENSMUSG00000001424	Snd1	100	97.802	Mus_musculus
ENSANAG00000034463	SND1	100	98.022	MGP_PahariEiJ_G0021917	Snd1	100	98.482	Mus_pahari
ENSANAG00000034463	SND1	100	98.022	MGP_SPRETEiJ_G0029159	Snd1	100	98.022	Mus_spretus
ENSANAG00000034463	SND1	100	98.571	ENSMPUG00000006545	SND1	100	98.571	Mustela_putorius_furo
ENSANAG00000034463	SND1	99	97.318	ENSMLUG00000017130	SND1	99	97.318	Myotis_lucifugus
ENSANAG00000034463	SND1	100	98.352	ENSNGAG00000011186	Snd1	100	98.352	Nannospalax_galili
ENSANAG00000034463	SND1	99	84.199	ENSNBRG00000006681	snd1	99	83.964	Neolamprologus_brichardi
ENSANAG00000034463	SND1	100	99.231	ENSNLEG00000012263	SND1	100	99.322	Nomascus_leucogenys
ENSANAG00000034463	SND1	93	100.000	ENSOPRG00000013405	SND1	92	100.000	Ochotona_princeps
ENSANAG00000034463	SND1	100	98.462	ENSODEG00000011502	SND1	100	98.462	Octodon_degus
ENSANAG00000034463	SND1	99	84.199	ENSONIG00000011481	snd1	96	83.964	Oreochromis_niloticus
ENSANAG00000034463	SND1	99	94.683	ENSOANG00000000817	SND1	99	93.757	Ornithorhynchus_anatinus
ENSANAG00000034463	SND1	100	97.802	ENSOCUG00000001620	SND1	100	97.802	Oryctolagus_cuniculus
ENSANAG00000034463	SND1	99	83.464	ENSORLG00000015201	snd1	98	83.911	Oryzias_latipes
ENSANAG00000034463	SND1	99	83.575	ENSORLG00020013991	snd1	98	84.022	Oryzias_latipes_hni
ENSANAG00000034463	SND1	99	83.575	ENSORLG00015012436	snd1	98	84.022	Oryzias_latipes_hsok
ENSANAG00000034463	SND1	99	84.312	ENSOMEG00000006406	snd1	98	84.340	Oryzias_melastigma
ENSANAG00000034463	SND1	100	98.794	ENSOGAG00000013356	SND1	94	98.794	Otolemur_garnettii
ENSANAG00000034463	SND1	99	96.267	ENSOARG00000002149	SND1	100	96.271	Ovis_aries
ENSANAG00000034463	SND1	100	99.231	ENSPPAG00000042947	SND1	100	99.231	Pan_paniscus
ENSANAG00000034463	SND1	100	99.231	ENSPPRG00000004494	SND1	100	99.231	Panthera_pardus
ENSANAG00000034463	SND1	100	99.121	ENSPTIG00000014214	SND1	100	99.121	Panthera_tigris_altaica
ENSANAG00000034463	SND1	100	99.231	ENSPTRG00000023911	SND1	100	99.231	Pan_troglodytes
ENSANAG00000034463	SND1	99	99.209	ENSPANG00000011997	SND1	99	99.321	Papio_anubis
ENSANAG00000034463	SND1	99	81.747	ENSPKIG00000023494	snd1	98	81.798	Paramormyrops_kingsleyae
ENSANAG00000034463	SND1	93	82.994	ENSPMGG00000003629	snd1	100	82.994	Periophthalmus_magnuspinnatus
ENSANAG00000034463	SND1	100	98.242	ENSPEMG00000010240	Snd1	100	98.242	Peromyscus_maniculatus_bairdii
ENSANAG00000034463	SND1	99	73.559	ENSPMAG00000007915	-	99	73.559	Petromyzon_marinus
ENSANAG00000034463	SND1	100	96.374	ENSPCIG00000011561	SND1	100	96.374	Phascolarctos_cinereus
ENSANAG00000034463	SND1	100	83.772	ENSPFOG00000001557	snd1	99	84.650	Poecilia_formosa
ENSANAG00000034463	SND1	100	83.772	ENSPLAG00000018459	snd1	96	84.650	Poecilia_latipinna
ENSANAG00000034463	SND1	99	85.102	ENSPMEG00000006803	snd1	99	84.983	Poecilia_mexicana
ENSANAG00000034463	SND1	100	83.991	ENSPREG00000002189	snd1	99	84.872	Poecilia_reticulata
ENSANAG00000034463	SND1	93	99.132	ENSPPYG00000017972	SND1	100	99.132	Pongo_abelii
ENSANAG00000034463	SND1	100	86.593	ENSPCAG00000011305	SND1	99	86.511	Procavia_capensis
ENSANAG00000034463	SND1	100	99.121	ENSPCOG00000026791	SND1	100	99.121	Propithecus_coquereli
ENSANAG00000034463	SND1	100	97.143	ENSPVAG00000013945	SND1	100	97.143	Pteropus_vampyrus
ENSANAG00000034463	SND1	99	84.312	ENSPNYG00000000932	snd1	99	84.076	Pundamilia_nyererei
ENSANAG00000034463	SND1	99	84.572	ENSPNAG00000001206	snd1	98	84.444	Pygocentrus_nattereri
ENSANAG00000034463	SND1	99	97.851	ENSRNOG00000031173	Snd1	99	97.687	Rattus_norvegicus
ENSANAG00000034463	SND1	74	99.435	ENSRBIG00000027782	-	93	99.430	Rhinopithecus_bieti
ENSANAG00000034463	SND1	100	99.341	ENSRROG00000033020	SND1	100	99.341	Rhinopithecus_roxellana
ENSANAG00000034463	SND1	100	99.560	ENSSBOG00000032461	SND1	100	99.560	Saimiri_boliviensis_boliviensis
ENSANAG00000034463	SND1	99	93.326	ENSSHAG00000015359	SND1	100	92.905	Sarcophilus_harrisii
ENSANAG00000034463	SND1	99	83.557	ENSSFOG00015001103	snd1	98	83.574	Scleropages_formosus
ENSANAG00000034463	SND1	99	83.634	ENSSMAG00000001932	snd1	93	83.408	Scophthalmus_maximus
ENSANAG00000034463	SND1	99	84.650	ENSSDUG00000002699	snd1	92	84.427	Seriola_dumerili
ENSANAG00000034463	SND1	100	76.316	ENSSLDG00000001950	snd1	98	77.086	Seriola_lalandi_dorsalis
ENSANAG00000034463	SND1	88	99.057	ENSSARG00000004877	SND1	92	99.057	Sorex_araneus
ENSANAG00000034463	SND1	75	87.197	ENSSPUG00000017586	SND1	96	87.478	Sphenodon_punctatus
ENSANAG00000034463	SND1	74	86.549	ENSSPAG00000021398	snd1	96	86.562	Stegastes_partitus
ENSANAG00000034463	SND1	100	98.901	ENSSSCG00000016590	SND1	100	98.901	Sus_scrofa
ENSANAG00000034463	SND1	99	85.098	ENSTRUG00000014067	snd1	98	83.669	Takifugu_rubripes
ENSANAG00000034463	SND1	100	83.224	ENSTNIG00000011019	snd1	98	84.228	Tetraodon_nigroviridis
ENSANAG00000034463	SND1	95	93.160	ENSTBEG00000003999	SND1	100	93.160	Tupaia_belangeri
ENSANAG00000034463	SND1	100	94.286	ENSTTRG00000006059	SND1	100	94.286	Tursiops_truncatus
ENSANAG00000034463	SND1	71	89.870	ENSUAMG00000002820	-	86	89.785	Ursus_americanus
ENSANAG00000034463	SND1	93	99.240	ENSUAMG00000005604	-	93	99.240	Ursus_americanus
ENSANAG00000034463	SND1	100	99.011	ENSUMAG00000005960	SND1	100	99.011	Ursus_maritimus
ENSANAG00000034463	SND1	79	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSANAG00000034463	SND1	100	99.011	ENSVVUG00000007226	SND1	100	99.011	Vulpes_vulpes
ENSANAG00000034463	SND1	99	84.746	ENSXETG00000023043	snd1	100	84.668	Xenopus_tropicalis
ENSANAG00000034463	SND1	94	81.591	ENSXCOG00000013629	snd1	99	81.591	Xiphophorus_couchianus
ENSANAG00000034463	SND1	99	85.214	ENSXMAG00000011469	snd1	99	85.095	Xiphophorus_maculatus