EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000035334 (Gene tree)
Gene ID: 105728173
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 124515 bases
Position: chrKZ206783.1:143727-268241
Accession: 105728173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000035787	R3H	PF01424.22	2.5e-11	1	1
ENSANAP00000035776	R3H	PF01424.22	2.9e-11	1	1
ENSANAP00000035798	R3H	PF01424.22	2.9e-11	1	1
ENSANAP00000035785	R3H	PF01424.22	3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000053871	R3HDM1-205	1365	-	ENSANAP00000035802	454 (aa)	-	A0A2K5ERG8
ENSANAT00000053845	R3HDM1-201	3138	XM_012468471	ENSANAP00000035776	1045 (aa)	XP_012323894	A0A2K5ERC9
ENSANAT00000053867	R3HDM1-204	3240	-	ENSANAP00000035798	1079 (aa)	-	A0A2K5ERJ4
ENSANAT00000053856	R3HDM1-203	2919	XM_012468463	ENSANAP00000035787	972 (aa)	XP_012323886	A0A2K5ERF9
ENSANAT00000053854	R3HDM1-202	3306	XM_012468456	ENSANAP00000035785	1101 (aa)	XP_012323879	A0A2K5ERI3

Gene Model

Click here to download ENSANAG00000035334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000035334's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000035334	R3HDM1	68	51.675	ENSANAG00000035141	ARPP21	91	51.289
ENSANAG00000035334	R3HDM1	99	49.455	ENSANAG00000025397	-	95	57.421
ENSANAG00000035334	R3HDM1	99	47.817	ENSANAG00000031310	-	94	58.594

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000035334	R3HDM1	100	98.365	ENSG00000048991	R3HDM1	100	98.365	Homo_sapiens
ENSANAG00000035334	R3HDM1	88	63.733	ENSAPOG00000020850	r3hdm1	92	63.733	Acanthochromis_polyacanthus
ENSANAG00000035334	R3HDM1	100	95.562	ENSAMEG00000014886	R3HDM1	100	95.562	Ailuropoda_melanoleuca
ENSANAG00000035334	R3HDM1	87	58.333	ENSAOCG00000005192	r3hdm1	95	58.333	Amphiprion_ocellaris
ENSANAG00000035334	R3HDM1	87	63.467	ENSAPEG00000016108	r3hdm1	95	63.467	Amphiprion_percula
ENSANAG00000035334	R3HDM1	87	63.441	ENSATEG00000000232	r3hdm1	82	63.441	Anabas_testudineus
ENSANAG00000035334	R3HDM1	100	78.971	ENSAPLG00000015231	R3HDM1	100	79.152	Anas_platyrhynchos
ENSANAG00000035334	R3HDM1	100	76.836	ENSACAG00000001676	R3HDM1	100	77.098	Anolis_carolinensis
ENSANAG00000035334	R3HDM1	87	62.400	ENSACLG00000027282	r3hdm1	94	62.400	Astatotilapia_calliptera
ENSANAG00000035334	R3HDM1	61	40.432	ENSAMXG00000020587	arpp21	85	38.474	Astyanax_mexicanus
ENSANAG00000035334	R3HDM1	88	74.684	ENSAMXG00000003536	r3hdm1	100	55.854	Astyanax_mexicanus
ENSANAG00000035334	R3HDM1	89	78.882	ENSAMXG00000012861	R3HDM1	100	60.965	Astyanax_mexicanus
ENSANAG00000035334	R3HDM1	100	93.171	ENSBTAG00000013302	R3HDM1	100	91.652	Bos_taurus
ENSANAG00000035334	R3HDM1	100	98.819	ENSCJAG00000011718	R3HDM1	100	98.819	Callithrix_jacchus
ENSANAG00000035334	R3HDM1	100	96.105	ENSCAFG00000005075	R3HDM1	100	96.105	Canis_familiaris
ENSANAG00000035334	R3HDM1	100	95.833	ENSCAFG00020016119	R3HDM1	100	95.924	Canis_lupus_dingo
ENSANAG00000035334	R3HDM1	100	94.112	ENSCHIG00000020851	R3HDM1	100	94.203	Capra_hircus
ENSANAG00000035334	R3HDM1	100	89.192	ENSCPOG00000012784	R3HDM1	100	92.405	Cavia_porcellus
ENSANAG00000035334	R3HDM1	100	98.947	ENSCCAG00000027199	R3HDM1	100	98.947	Cebus_capucinus
ENSANAG00000035334	R3HDM1	100	98.524	ENSCATG00000023642	R3HDM1	100	98.183	Cercocebus_atys
ENSANAG00000035334	R3HDM1	100	89.270	ENSCLAG00000007962	R3HDM1	100	93.621	Chinchilla_lanigera
ENSANAG00000035334	R3HDM1	100	95.242	ENSCSAG00000016356	R3HDM1	100	95.242	Chlorocebus_sabaeus
ENSANAG00000035334	R3HDM1	80	90.909	ENSCHOG00000013638	R3HDM1	91	83.037	Choloepus_hoffmanni
ENSANAG00000035334	R3HDM1	91	91.144	ENSCPBG00000009645	R3HDM1	100	91.144	Chrysemys_picta_bellii
ENSANAG00000035334	R3HDM1	100	98.183	ENSCANG00000034748	R3HDM1	100	98.183	Colobus_angolensis_palliatus
ENSANAG00000035334	R3HDM1	99	88.967	ENSCGRG00001012357	R3hdm1	97	88.967	Cricetulus_griseus_chok1gshd
ENSANAG00000035334	R3HDM1	99	91.545	ENSCGRG00000012080	R3hdm1	100	93.004	Cricetulus_griseus_crigri
ENSANAG00000035334	R3HDM1	81	65.246	ENSCSEG00000008944	r3hdm1	82	65.246	Cynoglossus_semilaevis
ENSANAG00000035334	R3HDM1	87	61.333	ENSCVAG00000007582	r3hdm1	91	61.333	Cyprinodon_variegatus
ENSANAG00000035334	R3HDM1	65	35.475	ENSDARG00000061081	arpp21	95	35.242	Danio_rerio
ENSANAG00000035334	R3HDM1	100	92.033	ENSDNOG00000000771	R3HDM1	100	90.999	Dasypus_novemcinctus
ENSANAG00000035334	R3HDM1	100	83.333	ENSETEG00000013606	R3HDM1	100	83.514	Echinops_telfairi
ENSANAG00000035334	R3HDM1	67	41.347	ENSEBUG00000014746	arpp21	97	42.273	Eptatretus_burgeri
ENSANAG00000035334	R3HDM1	100	97.238	ENSEASG00005007392	R3HDM1	100	95.290	Equus_asinus_asinus
ENSANAG00000035334	R3HDM1	99	97.238	ENSECAG00000019114	R3HDM1	100	95.652	Equus_caballus
ENSANAG00000035334	R3HDM1	90	88.462	ENSEEUG00000012589	R3HDM1	91	86.876	Erinaceus_europaeus
ENSANAG00000035334	R3HDM1	83	77.670	ENSELUG00000004909	R3HDM1	99	55.410	Esox_lucius
ENSANAG00000035334	R3HDM1	92	52.722	ENSELUG00000014413	r3hdm1	100	52.385	Esox_lucius
ENSANAG00000035334	R3HDM1	100	96.961	ENSFCAG00000027113	R3HDM1	100	95.199	Felis_catus
ENSANAG00000035334	R3HDM1	76	73.256	ENSFALG00000013731	R3HDM1	72	73.140	Ficedula_albicollis
ENSANAG00000035334	R3HDM1	100	89.104	ENSFDAG00000016478	R3HDM1	100	93.827	Fukomys_damarensis
ENSANAG00000035334	R3HDM1	87	57.353	ENSFHEG00000018713	r3hdm1	91	62.133	Fundulus_heteroclitus
ENSANAG00000035334	R3HDM1	60	64.783	ENSGMOG00000006042	-	74	65.000	Gadus_morhua
ENSANAG00000035334	R3HDM1	88	85.948	ENSGALG00000012246	R3HDM1	99	85.902	Gallus_gallus
ENSANAG00000035334	R3HDM1	87	61.600	ENSGAFG00000006203	r3hdm1	95	61.600	Gambusia_affinis
ENSANAG00000035334	R3HDM1	86	68.269	ENSGACG00000014925	r3hdm1	99	47.177	Gasterosteus_aculeatus
ENSANAG00000035334	R3HDM1	99	83.380	ENSGAGG00000007840	R3HDM1	96	83.459	Gopherus_agassizii
ENSANAG00000035334	R3HDM1	100	98.002	ENSGGOG00000008156	R3HDM1	100	98.002	Gorilla_gorilla
ENSANAG00000035334	R3HDM1	100	89.710	ENSHGLG00000015718	R3HDM1	100	93.827	Heterocephalus_glaber_female
ENSANAG00000035334	R3HDM1	100	89.446	ENSHGLG00100003184	-	100	93.827	Heterocephalus_glaber_male
ENSANAG00000035334	R3HDM1	100	69.022	ENSHGLG00100015374	-	100	69.112	Heterocephalus_glaber_male
ENSANAG00000035334	R3HDM1	87	59.517	ENSHCOG00000013366	r3hdm1	91	60.322	Hippocampus_comes
ENSANAG00000035334	R3HDM1	87	68.365	ENSIPUG00000001676	R3HDM1	100	65.789	Ictalurus_punctatus
ENSANAG00000035334	R3HDM1	53	37.633	ENSIPUG00000020552	arpp21	74	37.943	Ictalurus_punctatus
ENSANAG00000035334	R3HDM1	89	68.615	ENSIPUG00000013629	r3hdm1	94	70.288	Ictalurus_punctatus
ENSANAG00000035334	R3HDM1	100	95.100	ENSSTOG00000007572	R3HDM1	99	96.679	Ictidomys_tridecemlineatus
ENSANAG00000035334	R3HDM1	96	71.157	ENSLACG00000005334	R3HDM1	100	71.143	Latimeria_chalumnae
ENSANAG00000035334	R3HDM1	100	65.466	ENSLOCG00000001641	r3hdm1	100	66.133	Lepisosteus_oculatus
ENSANAG00000035334	R3HDM1	100	91.645	ENSLAFG00000009065	R3HDM1	100	91.645	Loxodonta_africana
ENSANAG00000035334	R3HDM1	100	98.365	ENSMFAG00000030331	R3HDM1	100	99.015	Macaca_fascicularis
ENSANAG00000035334	R3HDM1	100	98.183	ENSMMUG00000009844	R3HDM1	100	98.183	Macaca_mulatta
ENSANAG00000035334	R3HDM1	100	98.183	ENSMNEG00000027793	R3HDM1	100	99.015	Macaca_nemestrina
ENSANAG00000035334	R3HDM1	100	98.456	ENSMLEG00000043189	R3HDM1	100	98.456	Mandrillus_leucophaeus
ENSANAG00000035334	R3HDM1	87	62.466	ENSMAMG00000004532	r3hdm1	91	57.635	Mastacembelus_armatus
ENSANAG00000035334	R3HDM1	87	62.400	ENSMZEG00005003157	r3hdm1	95	57.353	Maylandia_zebra
ENSANAG00000035334	R3HDM1	100	78.700	ENSMGAG00000012461	R3HDM1	100	78.791	Meleagris_gallopavo
ENSANAG00000035334	R3HDM1	100	88.596	ENSMAUG00000010315	R3hdm1	100	92.593	Mesocricetus_auratus
ENSANAG00000035334	R3HDM1	95	92.649	ENSMICG00000042655	-	100	92.649	Microcebus_murinus
ENSANAG00000035334	R3HDM1	100	94.394	ENSMICG00000005900	-	100	94.394	Microcebus_murinus
ENSANAG00000035334	R3HDM1	50	93.542	ENSMOCG00000019833	-	99	93.542	Microtus_ochrogaster
ENSANAG00000035334	R3HDM1	90	77.873	ENSMODG00000000923	R3HDM1	97	77.968	Monodelphis_domestica
ENSANAG00000035334	R3HDM1	99	58.065	ENSMALG00000009000	r3hdm1	91	58.065	Monopterus_albus
ENSANAG00000035334	R3HDM1	100	87.775	MGP_CAROLIEiJ_G0014543	R3hdm1	100	93.724	Mus_caroli
ENSANAG00000035334	R3HDM1	100	87.863	ENSMUSG00000056211	R3hdm1	100	93.724	Mus_musculus
ENSANAG00000035334	R3HDM1	100	87.687	MGP_PahariEiJ_G0027779	R3hdm1	100	93.724	Mus_pahari
ENSANAG00000035334	R3HDM1	100	88.039	MGP_SPRETEiJ_G0015350	R3hdm1	100	93.724	Mus_spretus
ENSANAG00000035334	R3HDM1	100	95.290	ENSMPUG00000002412	R3HDM1	100	95.290	Mustela_putorius_furo
ENSANAG00000035334	R3HDM1	100	93.580	ENSMLUG00000013824	R3HDM1	100	93.580	Myotis_lucifugus
ENSANAG00000035334	R3HDM1	100	98.278	ENSNLEG00000008622	R3HDM1	100	98.278	Nomascus_leucogenys
ENSANAG00000035334	R3HDM1	89	72.866	ENSMEUG00000011784	R3HDM1	100	72.967	Notamacropus_eugenii
ENSANAG00000035334	R3HDM1	100	88.303	ENSODEG00000008607	R3HDM1	100	93.827	Octodon_degus
ENSANAG00000035334	R3HDM1	94	67.183	ENSONIG00000012017	r3hdm1	91	67.183	Oreochromis_niloticus
ENSANAG00000035334	R3HDM1	100	81.982	ENSOANG00000007987	R3HDM1	100	82.252	Ornithorhynchus_anatinus
ENSANAG00000035334	R3HDM1	89	93.807	ENSOCUG00000017366	R3HDM1	98	93.807	Oryctolagus_cuniculus
ENSANAG00000035334	R3HDM1	87	60.904	ENSORLG00000004297	r3hdm1	90	60.904	Oryzias_latipes
ENSANAG00000035334	R3HDM1	89	61.333	ENSORLG00015017355	r3hdm1	91	61.333	Oryzias_latipes_hsok
ENSANAG00000035334	R3HDM1	100	93.931	ENSOGAG00000003136	R3HDM1	100	93.841	Otolemur_garnettii
ENSANAG00000035334	R3HDM1	100	93.931	ENSOARG00000010788	R3HDM1	100	94.022	Ovis_aries
ENSANAG00000035334	R3HDM1	100	98.367	ENSPPAG00000027858	R3HDM1	100	98.367	Pan_paniscus
ENSANAG00000035334	R3HDM1	100	94.928	ENSPPRG00000002626	R3HDM1	100	95.018	Panthera_pardus
ENSANAG00000035334	R3HDM1	100	94.837	ENSPTIG00000016581	R3HDM1	100	94.928	Panthera_tigris_altaica
ENSANAG00000035334	R3HDM1	100	98.279	ENSPTRG00000012494	R3HDM1	100	98.279	Pan_troglodytes
ENSANAG00000035334	R3HDM1	100	98.365	ENSPANG00000026448	R3HDM1	100	98.365	Papio_anubis
ENSANAG00000035334	R3HDM1	94	76.358	ENSPKIG00000004328	r3hdm1	91	76.677	Paramormyrops_kingsleyae
ENSANAG00000035334	R3HDM1	100	78.862	ENSPSIG00000012915	R3HDM1	100	79.133	Pelodiscus_sinensis
ENSANAG00000035334	R3HDM1	100	89.182	ENSPEMG00000015187	R3hdm1	100	92.798	Peromyscus_maniculatus_bairdii
ENSANAG00000035334	R3HDM1	91	53.186	ENSPMAG00000003369	-	98	43.402	Petromyzon_marinus
ENSANAG00000035334	R3HDM1	100	89.835	ENSPCIG00000002491	R3HDM1	100	84.248	Phascolarctos_cinereus
ENSANAG00000035334	R3HDM1	87	55.718	ENSPFOG00000015036	r3hdm1	91	55.718	Poecilia_formosa
ENSANAG00000035334	R3HDM1	87	60.212	ENSPLAG00000018042	r3hdm1	91	60.212	Poecilia_latipinna
ENSANAG00000035334	R3HDM1	87	60.212	ENSPMEG00000023947	r3hdm1	91	60.212	Poecilia_mexicana
ENSANAG00000035334	R3HDM1	81	68.932	ENSPREG00000007902	r3hdm1	91	60.267	Poecilia_reticulata
ENSANAG00000035334	R3HDM1	100	97.059	ENSPPYG00000012815	R3HDM1	100	97.005	Pongo_abelii
ENSANAG00000035334	R3HDM1	100	82.065	ENSPCAG00000006208	R3HDM1	100	81.522	Procavia_capensis
ENSANAG00000035334	R3HDM1	100	94.634	ENSPCOG00000012698	R3HDM1	100	94.634	Propithecus_coquereli
ENSANAG00000035334	R3HDM1	100	86.141	ENSPVAG00000006098	R3HDM1	100	86.141	Pteropus_vampyrus
ENSANAG00000035334	R3HDM1	88	76.603	ENSPNAG00000005436	R3HDM1	99	76.527	Pygocentrus_nattereri
ENSANAG00000035334	R3HDM1	94	74.522	ENSPNAG00000013952	r3hdm1	95	70.811	Pygocentrus_nattereri
ENSANAG00000035334	R3HDM1	68	39.060	ENSPNAG00000004162	arpp21	58	50.388	Pygocentrus_nattereri
ENSANAG00000035334	R3HDM1	100	87.247	ENSRNOG00000004099	R3hdm1	100	86.983	Rattus_norvegicus
ENSANAG00000035334	R3HDM1	100	97.716	ENSRBIG00000033317	R3HDM1	100	98.893	Rhinopithecus_bieti
ENSANAG00000035334	R3HDM1	100	98.619	ENSRROG00000034534	R3HDM1	100	98.251	Rhinopithecus_roxellana
ENSANAG00000035334	R3HDM1	100	98.638	ENSSBOG00000020389	R3HDM1	100	98.638	Saimiri_boliviensis_boliviensis
ENSANAG00000035334	R3HDM1	100	84.539	ENSSHAG00000016999	R3HDM1	100	84.629	Sarcophilus_harrisii
ENSANAG00000035334	R3HDM1	100	56.788	ENSSFOG00015019851	-	100	56.433	Scleropages_formosus
ENSANAG00000035334	R3HDM1	100	72.011	ENSSFOG00015014134	r3hdm1	100	70.631	Scleropages_formosus
ENSANAG00000035334	R3HDM1	99	60.811	ENSSMAG00000001669	r3hdm1	99	44.606	Scophthalmus_maximus
ENSANAG00000035334	R3HDM1	87	63.032	ENSSDUG00000010749	r3hdm1	91	63.032	Seriola_dumerili
ENSANAG00000035334	R3HDM1	92	69.551	ENSSLDG00000004499	r3hdm1	91	57.702	Seriola_lalandi_dorsalis
ENSANAG00000035334	R3HDM1	65	94.118	ENSSARG00000000352	-	64	94.118	Sorex_araneus
ENSANAG00000035334	R3HDM1	100	80.505	ENSSPUG00000004167	R3HDM1	100	80.505	Sphenodon_punctatus
ENSANAG00000035334	R3HDM1	87	63.733	ENSSPAG00000004648	r3hdm1	91	63.733	Stegastes_partitus
ENSANAG00000035334	R3HDM1	100	96.409	ENSSSCG00000015692	R3HDM1	100	95.109	Sus_scrofa
ENSANAG00000035334	R3HDM1	100	75.616	ENSTGUG00000011750	R3HDM1	100	73.466	Taeniopygia_guttata
ENSANAG00000035334	R3HDM1	81	67.857	ENSTRUG00000011654	r3hdm1	91	58.098	Takifugu_rubripes
ENSANAG00000035334	R3HDM1	82	67.732	ENSTNIG00000010362	r3hdm1	95	45.625	Tetraodon_nigroviridis
ENSANAG00000035334	R3HDM1	100	87.761	ENSTTRG00000003935	R3HDM1	100	88.134	Tursiops_truncatus
ENSANAG00000035334	R3HDM1	72	96.525	ENSUAMG00000024806	R3HDM1	99	93.542	Ursus_americanus
ENSANAG00000035334	R3HDM1	100	97.238	ENSUMAG00000005552	R3HDM1	100	94.154	Ursus_maritimus
ENSANAG00000035334	R3HDM1	97	94.485	ENSVPAG00000007333	R3HDM1	93	91.228	Vicugna_pacos
ENSANAG00000035334	R3HDM1	100	96.961	ENSVVUG00000006457	R3HDM1	100	92.165	Vulpes_vulpes
ENSANAG00000035334	R3HDM1	90	67.606	ENSXETG00000019330	r3hdm1	100	67.404	Xenopus_tropicalis
ENSANAG00000035334	R3HDM1	71	50.384	ENSXCOG00000017448	r3hdm1	94	50.000	Xiphophorus_couchianus
ENSANAG00000035334	R3HDM1	81	68.608	ENSXMAG00000007885	r3hdm1	82	68.608	Xiphophorus_maculatus