EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000035640 (Gene tree)
Gene ID: 105714018
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 16097 bases
Position: chrKZ203797.1:6959604-6975700
Accession: 105714018
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000036252	HVSL	PF09749.9	5.1e-63	1	1
ENSANAP00000036266	HVSL	PF09749.9	3e-51	1	2
ENSANAP00000036266	HVSL	PF09749.9	3e-51	2	2
ENSANAP00000036272	HVSL	PF09749.9	7.9e-29	1	1
ENSANAP00000036275	HVSL	PF09749.9	1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000054346	USB1-204	528	-	ENSANAP00000036275	175 (aa)	-	A0A2K5ESV7
ENSANAT00000054337	USB1-202	744	-	ENSANAP00000036266	247 (aa)	-	A0A2K5EST4
ENSANAT00000054343	USB1-203	477	-	ENSANAP00000036272	158 (aa)	-	A0A2K5EST1
ENSANAT00000054323	USB1-201	874	XM_012447851	ENSANAP00000036252	265 (aa)	XP_012303274	A0A2K5ESR1

Gene Model

Click here to download ENSANAG00000035640's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000035640's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000035640	USB1	100	95.094	ENSG00000103005	USB1	100	95.094	Homo_sapiens
ENSANAG00000035640	USB1	98	45.594	ENSAPOG00000011942	usb1	81	51.101	Acanthochromis_polyacanthus
ENSANAG00000035640	USB1	100	82.528	ENSAMEG00000017205	USB1	100	81.413	Ailuropoda_melanoleuca
ENSANAG00000035640	USB1	85	53.571	ENSACIG00000012234	usb1	82	53.571	Amphilophus_citrinellus
ENSANAG00000035640	USB1	95	49.402	ENSAOCG00000014831	usb1	80	52.863	Amphiprion_ocellaris
ENSANAG00000035640	USB1	95	49.801	ENSAPEG00000000296	usb1	80	53.304	Amphiprion_percula
ENSANAG00000035640	USB1	99	48.289	ENSATEG00000009348	usb1	82	51.948	Anabas_testudineus
ENSANAG00000035640	USB1	85	69.604	ENSAPLG00000002756	USB1	100	70.044	Anas_platyrhynchos
ENSANAG00000035640	USB1	86	62.882	ENSACAG00000015481	USB1	100	62.882	Anolis_carolinensis
ENSANAG00000035640	USB1	94	49.398	ENSACLG00000020586	usb1	80	52.212	Astatotilapia_calliptera
ENSANAG00000035640	USB1	84	50.673	ENSAMXG00000040146	usb1	74	50.673	Astyanax_mexicanus
ENSANAG00000035640	USB1	100	83.396	ENSBTAG00000015758	USB1	100	83.396	Bos_taurus
ENSANAG00000035640	USB1	100	96.981	ENSCJAG00000011733	USB1	100	96.981	Callithrix_jacchus
ENSANAG00000035640	USB1	99	80.515	ENSCAFG00000008556	USB1	73	79.044	Canis_familiaris
ENSANAG00000035640	USB1	99	80.220	ENSCAFG00020009263	USB1	99	79.121	Canis_lupus_dingo
ENSANAG00000035640	USB1	100	82.264	ENSCHIG00000024290	USB1	100	82.264	Capra_hircus
ENSANAG00000035640	USB1	100	89.434	ENSTSYG00000006997	USB1	100	89.434	Carlito_syrichta
ENSANAG00000035640	USB1	74	83.761	ENSCAPG00000009057	USB1	100	70.561	Cavia_aperea
ENSANAG00000035640	USB1	100	80.970	ENSCPOG00000014325	USB1	100	80.970	Cavia_porcellus
ENSANAG00000035640	USB1	100	98.113	ENSCCAG00000022132	USB1	100	98.113	Cebus_capucinus
ENSANAG00000035640	USB1	100	94.717	ENSCATG00000032174	USB1	100	94.717	Cercocebus_atys
ENSANAG00000035640	USB1	66	86.932	ENSCLAG00000007363	USB1	100	86.932	Chinchilla_lanigera
ENSANAG00000035640	USB1	100	95.849	ENSCSAG00000004783	USB1	100	95.849	Chlorocebus_sabaeus
ENSANAG00000035640	USB1	92	65.306	ENSCPBG00000026943	USB1	85	66.250	Chrysemys_picta_bellii
ENSANAG00000035640	USB1	85	30.290	ENSCING00000011490	-	87	30.290	Ciona_intestinalis
ENSANAG00000035640	USB1	83	30.702	ENSCSAVG00000000894	-	82	30.702	Ciona_savignyi
ENSANAG00000035640	USB1	100	94.717	ENSCANG00000037135	USB1	100	94.717	Colobus_angolensis_palliatus
ENSANAG00000035640	USB1	100	85.075	ENSCGRG00001011243	USB1	100	84.701	Cricetulus_griseus_chok1gshd
ENSANAG00000035640	USB1	100	85.075	ENSCGRG00000013252	USB1	100	84.701	Cricetulus_griseus_crigri
ENSANAG00000035640	USB1	98	46.715	ENSCSEG00000013881	usb1	82	50.877	Cynoglossus_semilaevis
ENSANAG00000035640	USB1	85	48.684	ENSCVAG00000009252	usb1	97	49.123	Cyprinodon_variegatus
ENSANAG00000035640	USB1	85	50.000	ENSDARG00000003841	usb1	81	50.000	Danio_rerio
ENSANAG00000035640	USB1	100	82.264	ENSDORG00000001888	Usb1	100	82.264	Dipodomys_ordii
ENSANAG00000035640	USB1	87	37.959	FBgn0037713	CG16790	91	37.959	Drosophila_melanogaster
ENSANAG00000035640	USB1	95	75.000	ENSETEG00000019682	USB1	100	69.288	Echinops_telfairi
ENSANAG00000035640	USB1	84	49.550	ENSEBUG00000005889	usb1	78	49.550	Eptatretus_burgeri
ENSANAG00000035640	USB1	100	84.528	ENSEASG00005005484	USB1	100	84.528	Equus_asinus_asinus
ENSANAG00000035640	USB1	100	85.283	ENSECAG00000019493	USB1	91	85.283	Equus_caballus
ENSANAG00000035640	USB1	66	78.409	ENSEEUG00000000154	USB1	66	78.409	Erinaceus_europaeus
ENSANAG00000035640	USB1	94	47.200	ENSELUG00000010974	usb1	88	47.755	Esox_lucius
ENSANAG00000035640	USB1	100	83.895	ENSFCAG00000002693	USB1	100	83.895	Felis_catus
ENSANAG00000035640	USB1	85	66.372	ENSFALG00000006876	USB1	99	61.624	Ficedula_albicollis
ENSANAG00000035640	USB1	100	83.146	ENSFDAG00000010052	USB1	100	83.146	Fukomys_damarensis
ENSANAG00000035640	USB1	92	43.827	ENSFHEG00000012334	usb1	78	52.041	Fundulus_heteroclitus
ENSANAG00000035640	USB1	84	49.776	ENSGMOG00000004228	usb1	99	49.776	Gadus_morhua
ENSANAG00000035640	USB1	84	66.518	ENSGALG00000035604	USB1	100	62.406	Gallus_gallus
ENSANAG00000035640	USB1	98	47.653	ENSGAFG00000021890	usb1	82	51.754	Gambusia_affinis
ENSANAG00000035640	USB1	85	50.442	ENSGACG00000003257	usb1	81	50.442	Gasterosteus_aculeatus
ENSANAG00000035640	USB1	100	62.909	ENSGAGG00000022572	USB1	100	62.271	Gopherus_agassizii
ENSANAG00000035640	USB1	100	95.849	ENSGGOG00000017147	USB1	100	95.849	Gorilla_gorilla
ENSANAG00000035640	USB1	94	50.201	ENSHBUG00000009823	usb1	81	52.863	Haplochromis_burtoni
ENSANAG00000035640	USB1	100	83.895	ENSHGLG00000016078	USB1	98	83.895	Heterocephalus_glaber_female
ENSANAG00000035640	USB1	100	83.895	ENSHGLG00100005562	USB1	98	83.895	Heterocephalus_glaber_male
ENSANAG00000035640	USB1	82	53.456	ENSHCOG00000015633	usb1	86	53.363	Hippocampus_comes
ENSANAG00000035640	USB1	85	53.125	ENSIPUG00000008601	usb1	78	53.125	Ictalurus_punctatus
ENSANAG00000035640	USB1	100	83.150	ENSSTOG00000007548	USB1	100	83.150	Ictidomys_tridecemlineatus
ENSANAG00000035640	USB1	100	85.768	ENSJJAG00000021859	Usb1	100	85.768	Jaculus_jaculus
ENSANAG00000035640	USB1	86	52.423	ENSKMAG00000007200	usb1	80	52.423	Kryptolebias_marmoratus
ENSANAG00000035640	USB1	75	50.754	ENSLBEG00000008452	usb1	64	52.105	Labrus_bergylta
ENSANAG00000035640	USB1	85	55.459	ENSLACG00000000105	USB1	72	59.809	Latimeria_chalumnae
ENSANAG00000035640	USB1	95	52.918	ENSLOCG00000000465	usb1	85	53.909	Lepisosteus_oculatus
ENSANAG00000035640	USB1	100	64.444	ENSLAFG00000002267	USB1	100	64.815	Loxodonta_africana
ENSANAG00000035640	USB1	100	95.094	ENSMFAG00000003926	USB1	100	95.094	Macaca_fascicularis
ENSANAG00000035640	USB1	100	95.094	ENSMMUG00000022669	USB1	100	95.094	Macaca_mulatta
ENSANAG00000035640	USB1	100	94.717	ENSMNEG00000042487	USB1	100	94.717	Macaca_nemestrina
ENSANAG00000035640	USB1	100	95.094	ENSMLEG00000028756	USB1	100	95.094	Mandrillus_leucophaeus
ENSANAG00000035640	USB1	98	47.653	ENSMAMG00000015092	usb1	81	52.212	Mastacembelus_armatus
ENSANAG00000035640	USB1	94	49.398	ENSMZEG00005010008	usb1	80	52.212	Maylandia_zebra
ENSANAG00000035640	USB1	100	84.644	ENSMAUG00000007832	Usb1	100	84.644	Mesocricetus_auratus
ENSANAG00000035640	USB1	100	89.873	ENSMICG00000004900	USB1	100	89.873	Microcebus_murinus
ENSANAG00000035640	USB1	100	84.270	ENSMOCG00000022647	Usb1	100	84.270	Microtus_ochrogaster
ENSANAG00000035640	USB1	86	52.193	ENSMMOG00000000490	usb1	88	52.193	Mola_mola
ENSANAG00000035640	USB1	100	67.537	ENSMODG00000014067	USB1	100	66.045	Monodelphis_domestica
ENSANAG00000035640	USB1	94	49.398	ENSMALG00000005930	usb1	80	52.423	Monopterus_albus
ENSANAG00000035640	USB1	100	81.273	MGP_CAROLIEiJ_G0031421	Usb1	100	84.956	Mus_caroli
ENSANAG00000035640	USB1	100	81.648	ENSMUSG00000031792	Usb1	100	85.841	Mus_musculus
ENSANAG00000035640	USB1	100	82.022	MGP_PahariEiJ_G0023019	Usb1	100	86.325	Mus_pahari
ENSANAG00000035640	USB1	100	80.899	MGP_SPRETEiJ_G0032540	Usb1	100	80.899	Mus_spretus
ENSANAG00000035640	USB1	100	80.669	ENSMPUG00000004684	USB1	96	79.182	Mustela_putorius_furo
ENSANAG00000035640	USB1	87	86.580	ENSMLUG00000007400	USB1	100	86.580	Myotis_lucifugus
ENSANAG00000035640	USB1	100	84.015	ENSNGAG00000009703	Usb1	100	84.015	Nannospalax_galili
ENSANAG00000035640	USB1	94	47.521	ENSNBRG00000008747	usb1	99	52.970	Neolamprologus_brichardi
ENSANAG00000035640	USB1	100	92.405	ENSNLEG00000003340	USB1	100	96.000	Nomascus_leucogenys
ENSANAG00000035640	USB1	94	58.333	ENSMEUG00000003328	-	100	59.211	Notamacropus_eugenii
ENSANAG00000035640	USB1	74	77.778	ENSOPRG00000011803	USB1	72	81.818	Ochotona_princeps
ENSANAG00000035640	USB1	100	80.524	ENSODEG00000016214	USB1	100	80.524	Octodon_degus
ENSANAG00000035640	USB1	98	47.872	ENSONIG00000011063	usb1	81	53.304	Oreochromis_niloticus
ENSANAG00000035640	USB1	85	73.778	ENSOANG00000012118	USB1	94	73.778	Ornithorhynchus_anatinus
ENSANAG00000035640	USB1	86	49.561	ENSORLG00000012479	usb1	83	49.561	Oryzias_latipes
ENSANAG00000035640	USB1	86	49.561	ENSORLG00020018671	usb1	84	49.561	Oryzias_latipes_hni
ENSANAG00000035640	USB1	86	49.561	ENSORLG00015009679	usb1	84	49.561	Oryzias_latipes_hsok
ENSANAG00000035640	USB1	85	49.115	ENSOMEG00000012930	usb1	82	48.684	Oryzias_melastigma
ENSANAG00000035640	USB1	100	87.045	ENSOGAG00000003273	USB1	100	87.045	Otolemur_garnettii
ENSANAG00000035640	USB1	95	80.632	ENSOARG00000001107	USB1	93	82.716	Ovis_aries
ENSANAG00000035640	USB1	100	96.226	ENSPPAG00000042137	USB1	100	96.226	Pan_paniscus
ENSANAG00000035640	USB1	100	83.895	ENSPPRG00000024797	USB1	100	83.895	Panthera_pardus
ENSANAG00000035640	USB1	100	83.895	ENSPTIG00000007506	USB1	100	83.895	Panthera_tigris_altaica
ENSANAG00000035640	USB1	100	94.737	ENSPTRG00000008172	USB1	100	95.794	Pan_troglodytes
ENSANAG00000035640	USB1	100	95.094	ENSPANG00000025138	USB1	100	95.094	Papio_anubis
ENSANAG00000035640	USB1	96	51.163	ENSPKIG00000015109	usb1	76	54.667	Paramormyrops_kingsleyae
ENSANAG00000035640	USB1	85	53.540	ENSPSIG00000004305	USB1	100	53.540	Pelodiscus_sinensis
ENSANAG00000035640	USB1	84	51.121	ENSPMGG00000017725	usb1	85	51.121	Periophthalmus_magnuspinnatus
ENSANAG00000035640	USB1	100	83.456	ENSPEMG00000016183	Usb1	100	81.250	Peromyscus_maniculatus_bairdii
ENSANAG00000035640	USB1	85	49.115	ENSPMAG00000000462	usb1	95	49.115	Petromyzon_marinus
ENSANAG00000035640	USB1	98	46.931	ENSPFOG00000011130	usb1	82	51.316	Poecilia_formosa
ENSANAG00000035640	USB1	98	46.931	ENSPLAG00000009820	usb1	82	51.316	Poecilia_latipinna
ENSANAG00000035640	USB1	98	47.292	ENSPMEG00000006402	usb1	82	51.316	Poecilia_mexicana
ENSANAG00000035640	USB1	92	44.521	ENSPREG00000001047	usb1	79	52.551	Poecilia_reticulata
ENSANAG00000035640	USB1	95	92.063	ENSPPYG00000007401	USB1	100	92.063	Pongo_abelii
ENSANAG00000035640	USB1	100	91.139	ENSPCOG00000022612	USB1	100	91.139	Propithecus_coquereli
ENSANAG00000035640	USB1	100	80.377	ENSPVAG00000004613	USB1	100	80.377	Pteropus_vampyrus
ENSANAG00000035640	USB1	94	50.649	ENSPNYG00000022262	usb1	81	52.863	Pundamilia_nyererei
ENSANAG00000035640	USB1	98	46.743	ENSPNAG00000011736	usb1	76	51.339	Pygocentrus_nattereri
ENSANAG00000035640	USB1	100	83.895	ENSRNOG00000013216	Usb1	100	83.895	Rattus_norvegicus
ENSANAG00000035640	USB1	100	95.142	ENSRBIG00000044466	USB1	100	96.729	Rhinopithecus_bieti
ENSANAG00000035640	USB1	100	95.472	ENSRROG00000029211	USB1	100	95.472	Rhinopithecus_roxellana
ENSANAG00000035640	USB1	100	96.226	ENSSBOG00000029362	USB1	100	96.226	Saimiri_boliviensis_boliviensis
ENSANAG00000035640	USB1	83	72.603	ENSSHAG00000006993	USB1	94	70.042	Sarcophilus_harrisii
ENSANAG00000035640	USB1	89	55.462	ENSSFOG00015023663	usb1	75	55.462	Scleropages_formosus
ENSANAG00000035640	USB1	98	47.826	ENSSMAG00000015834	usb1	99	46.128	Scophthalmus_maximus
ENSANAG00000035640	USB1	85	54.018	ENSSDUG00000002949	usb1	83	54.018	Seriola_dumerili
ENSANAG00000035640	USB1	98	46.316	ENSSLDG00000014174	usb1	99	48.387	Seriola_lalandi_dorsalis
ENSANAG00000035640	USB1	81	69.626	ENSSPUG00000006741	USB1	100	69.626	Sphenodon_punctatus
ENSANAG00000035640	USB1	86	51.101	ENSSPAG00000007484	usb1	80	51.101	Stegastes_partitus
ENSANAG00000035640	USB1	100	83.643	ENSSSCG00000002807	USB1	100	82.156	Sus_scrofa
ENSANAG00000035640	USB1	80	69.340	ENSTGUG00000004792	USB1	87	68.018	Taeniopygia_guttata
ENSANAG00000035640	USB1	98	47.015	ENSTRUG00000021069	usb1	86	49.351	Takifugu_rubripes
ENSANAG00000035640	USB1	98	45.660	ENSTNIG00000000626	usb1	83	48.214	Tetraodon_nigroviridis
ENSANAG00000035640	USB1	88	61.207	ENSTBEG00000001507	USB1	100	61.207	Tupaia_belangeri
ENSANAG00000035640	USB1	100	82.156	ENSUAMG00000016823	USB1	100	82.156	Ursus_americanus
ENSANAG00000035640	USB1	81	86.449	ENSUMAG00000021369	USB1	100	86.449	Ursus_maritimus
ENSANAG00000035640	USB1	99	50.000	ENSVPAG00000009834	-	59	87.500	Vicugna_pacos
ENSANAG00000035640	USB1	99	81.343	ENSVVUG00000023700	USB1	93	84.647	Vulpes_vulpes
ENSANAG00000035640	USB1	82	55.046	ENSXETG00000013795	usb1	94	53.814	Xenopus_tropicalis
ENSANAG00000035640	USB1	94	49.200	ENSXMAG00000024687	usb1	67	51.754	Xiphophorus_maculatus