EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000035790 (Gene tree)
Gene ID: 105719442
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat domain 1
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 17815 bases
Position: chrKZ200118.1:633111-650925
Accession: 105719442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000036557	PPR	PF01535.20	5.3e-16	1	2
ENSANAP00000036557	PPR	PF01535.20	5.3e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000054630	-	2221	XM_012455509	ENSANAP00000036557	684 (aa)	XP_012310932	A0A2K5ETM2

Gene Model

Click here to download ENSANAG00000035790's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000035790's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000035790	-	100	88.792	ENSG00000248919	ATP5MF-PTCD1	91	88.792	Homo_sapiens
ENSANAG00000035790	-	100	88.792	ENSG00000106246	PTCD1	98	88.792	Homo_sapiens
ENSANAG00000035790	-	83	45.904	ENSAPOG00000010679	ptcd1	88	44.975	Acanthochromis_polyacanthus
ENSANAG00000035790	-	99	77.201	ENSAMEG00000006224	-	91	77.056	Ailuropoda_melanoleuca
ENSANAG00000035790	-	87	48.361	ENSACIG00000017861	ptcd1	85	48.276	Amphilophus_citrinellus
ENSANAG00000035790	-	82	47.895	ENSAOCG00000022617	ptcd1	81	48.233	Amphiprion_ocellaris
ENSANAG00000035790	-	86	48.744	ENSAOCG00000020741	-	80	49.073	Amphiprion_ocellaris
ENSANAG00000035790	-	86	48.495	ENSAPEG00000022632	ptcd1	80	48.904	Amphiprion_percula
ENSANAG00000035790	-	86	50.084	ENSATEG00000007016	ptcd1	80	50.085	Anabas_testudineus
ENSANAG00000035790	-	87	60.165	ENSAPLG00000006862	-	93	60.165	Anas_platyrhynchos
ENSANAG00000035790	-	99	55.043	ENSACAG00000012871	-	91	55.043	Anolis_carolinensis
ENSANAG00000035790	-	86	49.079	ENSACLG00000002824	ptcd1	80	48.993	Astatotilapia_calliptera
ENSANAG00000035790	-	90	46.729	ENSAMXG00000037292	ptcd1	89	45.866	Astyanax_mexicanus
ENSANAG00000035790	-	100	77.358	ENSBTAG00000020440	-	85	77.358	Bos_taurus
ENSANAG00000035790	-	100	95.906	ENSCJAG00000015815	-	98	95.906	Callithrix_jacchus
ENSANAG00000035790	-	100	76.691	ENSCAFG00000015055	-	91	76.547	Canis_familiaris
ENSANAG00000035790	-	100	76.691	ENSCAFG00020014480	-	91	76.547	Canis_lupus_dingo
ENSANAG00000035790	-	100	76.744	ENSCHIG00000027000	-	97	76.744	Capra_hircus
ENSANAG00000035790	-	99	80.406	ENSTSYG00000029495	-	98	80.406	Carlito_syrichta
ENSANAG00000035790	-	94	74.455	ENSCAPG00000014660	-	98	74.455	Cavia_aperea
ENSANAG00000035790	-	100	73.585	ENSCPOG00000001780	-	98	73.585	Cavia_porcellus
ENSANAG00000035790	-	100	94.891	ENSCCAG00000034025	-	98	94.891	Cebus_capucinus
ENSANAG00000035790	-	100	88.792	ENSCATG00000040859	-	98	89.083	Cercocebus_atys
ENSANAG00000035790	-	100	76.335	ENSCLAG00000006354	-	98	76.190	Chinchilla_lanigera
ENSANAG00000035790	-	94	88.820	ENSCSAG00000017794	-	95	88.975	Chlorocebus_sabaeus
ENSANAG00000035790	-	99	54.076	ENSCPBG00000020866	-	97	53.752	Chrysemys_picta_bellii
ENSANAG00000035790	-	78	31.481	ENSCING00000007717	-	91	31.667	Ciona_intestinalis
ENSANAG00000035790	-	100	88.064	ENSCANG00000023441	-	98	88.646	Colobus_angolensis_palliatus
ENSANAG00000035790	-	99	73.362	ENSCGRG00001023686	Ptcd1	97	73.362	Cricetulus_griseus_chok1gshd
ENSANAG00000035790	-	99	72.938	ENSCGRG00000015031	Ptcd1	97	72.938	Cricetulus_griseus_crigri
ENSANAG00000035790	-	86	47.395	ENSCSEG00000002378	ptcd1	83	46.875	Cynoglossus_semilaevis
ENSANAG00000035790	-	86	47.342	ENSCVAG00000015826	ptcd1	81	47.245	Cyprinodon_variegatus
ENSANAG00000035790	-	88	46.341	ENSCVAG00000003621	ptcd1	88	46.242	Cyprinodon_variegatus
ENSANAG00000035790	-	89	49.194	ENSDARG00000076176	ptcd1	87	49.511	Danio_rerio
ENSANAG00000035790	-	100	73.449	ENSDNOG00000009957	-	98	74.676	Dasypus_novemcinctus
ENSANAG00000035790	-	100	74.090	ENSDORG00000000740	Ptcd1	99	74.090	Dipodomys_ordii
ENSANAG00000035790	-	90	42.308	ENSEBUG00000014515	ptcd1	97	43.127	Eptatretus_burgeri
ENSANAG00000035790	-	100	79.310	ENSEASG00005002480	-	98	79.167	Equus_asinus_asinus
ENSANAG00000035790	-	100	79.454	ENSECAG00000016617	-	98	79.310	Equus_caballus
ENSANAG00000035790	-	86	47.680	ENSELUG00000016517	ptcd1	82	47.673	Esox_lucius
ENSANAG00000035790	-	99	76.812	ENSFCAG00000015069	-	97	76.667	Felis_catus
ENSANAG00000035790	-	94	57.101	ENSFALG00000013803	-	91	57.831	Ficedula_albicollis
ENSANAG00000035790	-	100	75.253	ENSFDAG00000006393	-	98	75.109	Fukomys_damarensis
ENSANAG00000035790	-	77	46.197	ENSFHEG00000012491	ptcd1	88	46.197	Fundulus_heteroclitus
ENSANAG00000035790	-	85	48.014	ENSGMOG00000007639	ptcd1	91	48.014	Gadus_morhua
ENSANAG00000035790	-	87	59.319	ENSGALG00000004711	-	85	59.319	Gallus_gallus
ENSANAG00000035790	-	86	47.333	ENSGAFG00000013175	ptcd1	82	47.404	Gambusia_affinis
ENSANAG00000035790	-	88	48.689	ENSGACG00000016607	ptcd1	92	48.226	Gasterosteus_aculeatus
ENSANAG00000035790	-	94	52.880	ENSGAGG00000021832	-	100	52.819	Gopherus_agassizii
ENSANAG00000035790	-	100	88.937	ENSGGOG00000015123	-	98	88.937	Gorilla_gorilla
ENSANAG00000035790	-	86	48.911	ENSHBUG00000018275	ptcd1	80	48.826	Haplochromis_burtoni
ENSANAG00000035790	-	99	76.232	ENSHGLG00000017621	-	97	76.087	Heterocephalus_glaber_female
ENSANAG00000035790	-	99	76.232	ENSHGLG00100007218	-	97	76.087	Heterocephalus_glaber_male
ENSANAG00000035790	-	86	47.782	ENSHCOG00000010784	ptcd1	82	47.856	Hippocampus_comes
ENSANAG00000035790	-	100	75.144	ENSSTOG00000001682	-	98	75.000	Ictidomys_tridecemlineatus
ENSANAG00000035790	-	100	73.149	ENSJJAG00000000319	Ptcd1	98	73.149	Jaculus_jaculus
ENSANAG00000035790	-	85	47.189	ENSKMAG00000008708	ptcd1	80	47.099	Kryptolebias_marmoratus
ENSANAG00000035790	-	86	47.899	ENSLBEG00000008061	ptcd1	80	48.393	Labrus_bergylta
ENSANAG00000035790	-	90	58.080	ENSLACG00000011172	ptcd1	86	58.560	Latimeria_chalumnae
ENSANAG00000035790	-	91	53.763	ENSLOCG00000004833	ptcd1	93	55.316	Lepisosteus_oculatus
ENSANAG00000035790	-	100	69.857	ENSLAFG00000002588	-	98	71.019	Loxodonta_africana
ENSANAG00000035790	-	100	88.646	ENSMFAG00000041324	-	98	88.937	Macaca_fascicularis
ENSANAG00000035790	-	100	88.501	ENSMMUG00000030408	-	98	88.792	Macaca_mulatta
ENSANAG00000035790	-	100	88.646	ENSMNEG00000043786	-	98	88.937	Macaca_nemestrina
ENSANAG00000035790	-	100	67.831	ENSMLEG00000031179	-	97	70.160	Mandrillus_leucophaeus
ENSANAG00000035790	-	86	50.588	ENSMAMG00000007623	ptcd1	80	50.423	Mastacembelus_armatus
ENSANAG00000035790	-	86	48.074	ENSMZEG00005012722	ptcd1	80	47.987	Maylandia_zebra
ENSANAG00000035790	-	99	56.223	ENSMGAG00000004211	-	90	56.366	Meleagris_gallopavo
ENSANAG00000035790	-	100	79.275	ENSMICG00000017428	-	98	79.275	Microcebus_murinus
ENSANAG00000035790	-	88	46.645	ENSMMOG00000020243	ptcd1	91	45.968	Mola_mola
ENSANAG00000035790	-	99	58.425	ENSMODG00000001350	-	98	58.069	Monodelphis_domestica
ENSANAG00000035790	-	86	50.167	ENSMALG00000018442	ptcd1	80	50.000	Monopterus_albus
ENSANAG00000035790	-	100	73.585	MGP_CAROLIEiJ_G0028011	Ptcd1	98	73.730	Mus_caroli
ENSANAG00000035790	-	100	73.295	ENSMUSG00000029624	Ptcd1	98	73.440	Mus_musculus
ENSANAG00000035790	-	100	73.178	MGP_PahariEiJ_G0024580	Ptcd1	98	73.324	Mus_pahari
ENSANAG00000035790	-	100	73.585	MGP_SPRETEiJ_G0029012	Ptcd1	98	73.730	Mus_spretus
ENSANAG00000035790	-	100	75.289	ENSMPUG00000016518	-	98	75.723	Mustela_putorius_furo
ENSANAG00000035790	-	100	78.879	ENSMLUG00000010994	-	92	79.023	Myotis_lucifugus
ENSANAG00000035790	-	88	48.298	ENSNBRG00000010079	ptcd1	85	48.208	Neolamprologus_brichardi
ENSANAG00000035790	-	100	90.244	ENSNLEG00000011060	-	97	90.244	Nomascus_leucogenys
ENSANAG00000035790	-	99	61.871	ENSMEUG00000006930	-	99	61.871	Notamacropus_eugenii
ENSANAG00000035790	-	89	76.570	ENSOPRG00000013647	-	87	76.570	Ochotona_princeps
ENSANAG00000035790	-	86	47.483	ENSONIG00000003168	ptcd1	95	47.395	Oreochromis_niloticus
ENSANAG00000035790	-	82	57.069	ENSOANG00000007728	-	73	57.343	Ornithorhynchus_anatinus
ENSANAG00000035790	-	99	73.669	ENSOCUG00000010584	-	96	73.669	Oryctolagus_cuniculus
ENSANAG00000035790	-	88	47.078	ENSORLG00000009275	ptcd1	85	47.145	Oryzias_latipes
ENSANAG00000035790	-	88	47.078	ENSORLG00020000988	ptcd1	85	47.145	Oryzias_latipes_hni
ENSANAG00000035790	-	88	46.591	ENSORLG00015010557	ptcd1	85	46.656	Oryzias_latipes_hsok
ENSANAG00000035790	-	90	46.117	ENSOMEG00000020627	ptcd1	87	46.645	Oryzias_melastigma
ENSANAG00000035790	-	100	76.266	ENSOGAG00000010877	-	99	76.122	Otolemur_garnettii
ENSANAG00000035790	-	100	72.569	ENSOARG00000018676	-	98	72.569	Ovis_aries
ENSANAG00000035790	-	100	88.937	ENSPPAG00000036024	-	98	88.937	Pan_paniscus
ENSANAG00000035790	-	99	77.907	ENSPPRG00000003478	-	97	77.762	Panthera_pardus
ENSANAG00000035790	-	100	88.646	ENSPTRG00000019452	-	98	88.646	Pan_troglodytes
ENSANAG00000035790	-	100	88.792	ENSPANG00000016730	-	98	89.083	Papio_anubis
ENSANAG00000035790	-	98	48.397	ENSPKIG00000014215	ptcd1	96	49.190	Paramormyrops_kingsleyae
ENSANAG00000035790	-	87	57.973	ENSPSIG00000011184	-	100	59.068	Pelodiscus_sinensis
ENSANAG00000035790	-	75	41.379	ENSPMAG00000009667	ptcd1	100	41.379	Petromyzon_marinus
ENSANAG00000035790	-	99	58.540	ENSPCIG00000024778	-	97	58.540	Phascolarctos_cinereus
ENSANAG00000035790	-	86	47.264	ENSPFOG00000004458	ptcd1	82	47.333	Poecilia_formosa
ENSANAG00000035790	-	86	47.264	ENSPLAG00000011051	ptcd1	82	47.333	Poecilia_latipinna
ENSANAG00000035790	-	86	47.264	ENSPMEG00000020547	ptcd1	82	47.333	Poecilia_mexicana
ENSANAG00000035790	-	85	46.801	ENSPREG00000000059	ptcd1	82	46.644	Poecilia_reticulata
ENSANAG00000035790	-	94	88.598	ENSPPYG00000017377	-	98	88.598	Pongo_abelii
ENSANAG00000035790	-	81	76.056	ENSPCAG00000001852	-	86	76.056	Procavia_capensis
ENSANAG00000035790	-	100	79.855	ENSPCOG00000018596	-	98	79.710	Propithecus_coquereli
ENSANAG00000035790	-	69	86.000	ENSPVAG00000007529	-	72	86.000	Pteropus_vampyrus
ENSANAG00000035790	-	86	48.744	ENSPNYG00000019993	ptcd1	80	48.658	Pundamilia_nyererei
ENSANAG00000035790	-	90	50.641	ENSPNAG00000014931	ptcd1	91	49.457	Pygocentrus_nattereri
ENSANAG00000035790	-	99	74.015	ENSRNOG00000000987	Ptcd1	98	74.015	Rattus_norvegicus
ENSANAG00000035790	-	100	88.501	ENSRBIG00000043393	-	98	89.083	Rhinopithecus_bieti
ENSANAG00000035790	-	100	88.210	ENSRROG00000036420	-	98	88.792	Rhinopithecus_roxellana
ENSANAG00000035790	-	100	95.468	ENSSBOG00000024114	-	98	95.468	Saimiri_boliviensis_boliviensis
ENSANAG00000035790	-	99	57.639	ENSSHAG00000011376	-	94	63.520	Sarcophilus_harrisii
ENSANAG00000035790	-	93	49.705	ENSSFOG00015007909	ptcd1	82	52.760	Scleropages_formosus
ENSANAG00000035790	-	86	46.970	ENSSMAG00000000218	ptcd1	91	47.288	Scophthalmus_maximus
ENSANAG00000035790	-	88	47.682	ENSSDUG00000015671	ptcd1	84	48.469	Seriola_dumerili
ENSANAG00000035790	-	86	48.495	ENSSLDG00000014261	ptcd1	83	47.980	Seriola_lalandi_dorsalis
ENSANAG00000035790	-	99	53.086	ENSSPUG00000003540	-	97	53.112	Sphenodon_punctatus
ENSANAG00000035790	-	86	49.750	ENSSPAG00000011049	ptcd1	80	49.664	Stegastes_partitus
ENSANAG00000035790	-	93	78.493	ENSSSCG00000007622	-	97	77.932	Sus_scrofa
ENSANAG00000035790	-	88	60.099	ENSTGUG00000007563	-	97	61.008	Taeniopygia_guttata
ENSANAG00000035790	-	89	47.222	ENSTRUG00000013471	ptcd1	79	48.294	Takifugu_rubripes
ENSANAG00000035790	-	90	47.840	ENSTNIG00000008271	ptcd1	88	46.914	Tetraodon_nigroviridis
ENSANAG00000035790	-	99	75.867	ENSTBEG00000011021	-	97	75.723	Tupaia_belangeri
ENSANAG00000035790	-	100	75.436	ENSTTRG00000003006	-	98	75.436	Tursiops_truncatus
ENSANAG00000035790	-	99	77.489	ENSUAMG00000008049	-	97	77.345	Ursus_americanus
ENSANAG00000035790	-	99	76.488	ENSVVUG00000008836	-	98	76.343	Vulpes_vulpes
ENSANAG00000035790	-	90	51.442	ENSXETG00000009891	ptcd1	86	52.570	Xenopus_tropicalis
ENSANAG00000035790	-	92	46.105	ENSXMAG00000015540	ptcd1	82	48.129	Xiphophorus_maculatus