EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000036253 (Gene tree)
Gene ID: -
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 15759 bases
Position: chrKZ198254.1:14056781-14072539
Accession: 105709036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000038409	MBD	PF01429.19	3.6e-16	1	1
ENSANAP00000038298	MBD	PF01429.19	3.8e-16	1	1
ENSANAP00000038408	MBD	PF01429.19	3.8e-16	1	1
ENSANAP00000038405	MBD	PF01429.19	4.1e-16	1	1
ENSANAP00000038406	MBD	PF01429.19	4.2e-16	1	1
ENSANAP00000038296	MBD	PF01429.19	4.3e-16	1	1
ENSANAP00000038419	MBD	PF01429.19	4.3e-16	1	1
ENSANAP00000038393	MBD	PF01429.19	4.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000056498	MBD1-206	1761	-	ENSANAP00000038408	586 (aa)	-	A0A2K5EYY5
ENSANAT00000056499	MBD1-207	1653	-	ENSANAP00000038409	550 (aa)	-	A0A2K5EYV5
ENSANAT00000056386	MBD1-201	4107	-	ENSANAP00000038296	627 (aa)	-	A0A2K5EYM3
ENSANAT00000056509	MBD1-208	1893	-	ENSANAP00000038419	630 (aa)	-	A0A2K5EYW6
ENSANAT00000056388	MBD1-202	3960	-	ENSANAP00000038298	578 (aa)	-	A0A2K5EYN8
ENSANAT00000056483	MBD1-203	1968	XM_021670074	ENSANAP00000038393	655 (aa)	XP_021525749	A0A2K5EYX2
ENSANAT00000056495	MBD1-204	1830	-	ENSANAP00000038405	609 (aa)	-	A0A2K5EZ14
ENSANAT00000056496	MBD1-205	1800	-	ENSANAP00000038406	599 (aa)	-	A0A2K5EYY9
ENSANAT00000056520	MBD1-209	1293	-	ENSANAP00000038430	430 (aa)	-	A0A2K5EZ41

Gene Model

Click here to download ENSANAG00000036253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000036253's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000036253	MBD1	100	96.508	ENSG00000141644	MBD1	100	96.508	Homo_sapiens
ENSANAG00000036253	MBD1	100	86.709	ENSAMEG00000000238	MBD1	96	86.076	Ailuropoda_melanoleuca
ENSANAG00000036253	MBD1	69	45.209	ENSACAG00000006091	-	100	44.802	Anolis_carolinensis
ENSANAG00000036253	MBD1	100	86.054	ENSBTAG00000003801	MBD1	100	86.212	Bos_taurus
ENSANAG00000036253	MBD1	100	98.321	ENSCJAG00000004959	MBD1	100	98.321	Callithrix_jacchus
ENSANAG00000036253	MBD1	100	85.895	ENSCAFG00000018928	MBD1	96	86.688	Canis_familiaris
ENSANAG00000036253	MBD1	99	85.072	ENSCAFG00020024272	MBD1	97	85.875	Canis_lupus_dingo
ENSANAG00000036253	MBD1	100	86.054	ENSCHIG00000021134	MBD1	100	86.212	Capra_hircus
ENSANAG00000036253	MBD1	100	90.382	ENSTSYG00000000509	MBD1	100	90.382	Carlito_syrichta
ENSANAG00000036253	MBD1	99	64.809	ENSCAPG00000015782	MBD1	96	71.985	Cavia_aperea
ENSANAG00000036253	MBD1	100	74.125	ENSCPOG00000001671	MBD1	99	72.927	Cavia_porcellus
ENSANAG00000036253	MBD1	100	96.037	ENSCCAG00000034600	MBD1	100	96.037	Cebus_capucinus
ENSANAG00000036253	MBD1	100	96.508	ENSCATG00000029959	MBD1	100	96.508	Cercocebus_atys
ENSANAG00000036253	MBD1	100	84.921	ENSCLAG00000007457	MBD1	89	84.921	Chinchilla_lanigera
ENSANAG00000036253	MBD1	100	93.016	ENSCSAG00000018070	MBD1	98	96.791	Chlorocebus_sabaeus
ENSANAG00000036253	MBD1	100	96.349	ENSCANG00000033425	MBD1	100	96.349	Colobus_angolensis_palliatus
ENSANAG00000036253	MBD1	100	72.611	ENSCGRG00001014843	Mbd1	100	73.450	Cricetulus_griseus_chok1gshd
ENSANAG00000036253	MBD1	99	56.180	ENSCGRG00000014135	Mbd1	98	64.051	Cricetulus_griseus_crigri
ENSANAG00000036253	MBD1	100	80.983	ENSDNOG00000015998	MBD1	100	83.043	Dasypus_novemcinctus
ENSANAG00000036253	MBD1	91	77.372	ENSDORG00000013917	Mbd1	100	77.021	Dipodomys_ordii
ENSANAG00000036253	MBD1	100	86.149	ENSEASG00005003857	MBD1	100	87.671	Equus_asinus_asinus
ENSANAG00000036253	MBD1	99	85.417	ENSECAG00000011497	MBD1	79	87.710	Equus_caballus
ENSANAG00000036253	MBD1	100	87.342	ENSFCAG00000015730	MBD1	100	86.867	Felis_catus
ENSANAG00000036253	MBD1	91	79.545	ENSFDAG00000011085	MBD1	95	79.717	Fukomys_damarensis
ENSANAG00000036253	MBD1	65	32.319	ENSGAFG00000008975	mbd1b	50	37.640	Gambusia_affinis
ENSANAG00000036253	MBD1	70	31.095	ENSGACG00000012106	-	58	33.152	Gasterosteus_aculeatus
ENSANAG00000036253	MBD1	100	96.349	ENSGGOG00000016966	MBD1	100	96.349	Gorilla_gorilla
ENSANAG00000036253	MBD1	100	85.238	ENSHGLG00000008740	MBD1	100	85.238	Heterocephalus_glaber_female
ENSANAG00000036253	MBD1	93	86.624	ENSHGLG00100005198	MBD1	100	87.622	Heterocephalus_glaber_male
ENSANAG00000036253	MBD1	62	38.650	ENSIPUG00000015243	-	50	37.086	Ictalurus_punctatus
ENSANAG00000036253	MBD1	100	82.437	ENSSTOG00000007780	MBD1	100	82.753	Ictidomys_tridecemlineatus
ENSANAG00000036253	MBD1	92	77.899	ENSJJAG00000022859	Mbd1	98	77.717	Jaculus_jaculus
ENSANAG00000036253	MBD1	67	32.227	ENSKMAG00000020760	mbd1b	50	34.463	Kryptolebias_marmoratus
ENSANAG00000036253	MBD1	88	37.546	ENSLACG00000002414	-	51	65.079	Latimeria_chalumnae
ENSANAG00000036253	MBD1	100	75.079	ENSLAFG00000031328	MBD1	100	75.079	Loxodonta_africana
ENSANAG00000036253	MBD1	100	96.190	ENSMFAG00000026335	MBD1	100	96.190	Macaca_fascicularis
ENSANAG00000036253	MBD1	100	96.190	ENSMMUG00000009050	MBD1	100	96.190	Macaca_mulatta
ENSANAG00000036253	MBD1	100	96.190	ENSMNEG00000038822	MBD1	100	96.190	Macaca_nemestrina
ENSANAG00000036253	MBD1	100	96.508	ENSMLEG00000043121	MBD1	100	96.508	Mandrillus_leucophaeus
ENSANAG00000036253	MBD1	71	36.842	ENSMAMG00000023341	-	51	59.155	Mastacembelus_armatus
ENSANAG00000036253	MBD1	100	87.500	ENSMICG00000006414	MBD1	100	88.416	Microcebus_murinus
ENSANAG00000036253	MBD1	51	72.792	ENSMOCG00000011976	-	93	77.186	Microtus_ochrogaster
ENSANAG00000036253	MBD1	71	43.796	ENSMODG00000001286	-	58	45.153	Monodelphis_domestica
ENSANAG00000036253	MBD1	100	66.061	ENSMUSG00000024561	Mbd1	100	67.180	Mus_musculus
ENSANAG00000036253	MBD1	100	64.832	MGP_PahariEiJ_G0019128	Mbd1	99	67.145	Mus_pahari
ENSANAG00000036253	MBD1	98	65.732	MGP_SPRETEiJ_G0023304	Mbd1	99	68.618	Mus_spretus
ENSANAG00000036253	MBD1	100	86.551	ENSMPUG00000008843	MBD1	96	86.076	Mustela_putorius_furo
ENSANAG00000036253	MBD1	100	84.762	ENSMLUG00000008286	MBD1	96	84.762	Myotis_lucifugus
ENSANAG00000036253	MBD1	100	66.250	ENSNGAG00000011412	Mbd1	96	75.410	Nannospalax_galili
ENSANAG00000036253	MBD1	100	95.556	ENSNLEG00000011661	-	100	95.556	Nomascus_leucogenys
ENSANAG00000036253	MBD1	100	87.646	ENSNLEG00000032711	-	100	86.978	Nomascus_leucogenys
ENSANAG00000036253	MBD1	100	71.746	ENSOPRG00000007647	MBD1	98	74.155	Ochotona_princeps
ENSANAG00000036253	MBD1	91	80.622	ENSODEG00000018451	MBD1	100	81.277	Octodon_degus
ENSANAG00000036253	MBD1	92	46.704	ENSOANG00000014593	-	100	46.780	Ornithorhynchus_anatinus
ENSANAG00000036253	MBD1	100	83.835	ENSOCUG00000006554	MBD1	100	84.311	Oryctolagus_cuniculus
ENSANAG00000036253	MBD1	100	87.031	ENSOGAG00000003784	MBD1	96	87.031	Otolemur_garnettii
ENSANAG00000036253	MBD1	100	85.759	ENSOARG00000004218	MBD1	95	85.918	Ovis_aries
ENSANAG00000036253	MBD1	100	96.183	ENSPPAG00000038886	MBD1	100	96.183	Pan_paniscus
ENSANAG00000036253	MBD1	100	87.500	ENSPPRG00000021387	MBD1	100	87.025	Panthera_pardus
ENSANAG00000036253	MBD1	100	87.500	ENSPTIG00000021231	MBD1	100	87.025	Panthera_tigris_altaica
ENSANAG00000036253	MBD1	100	96.349	ENSPTRG00000010021	MBD1	100	96.349	Pan_troglodytes
ENSANAG00000036253	MBD1	100	96.489	ENSPANG00000010867	MBD1	100	96.489	Papio_anubis
ENSANAG00000036253	MBD1	100	59.561	ENSPEMG00000022630	Mbd1	96	65.591	Peromyscus_maniculatus_bairdii
ENSANAG00000036253	MBD1	96	46.215	ENSPCIG00000027937	-	79	47.120	Phascolarctos_cinereus
ENSANAG00000036253	MBD1	55	53.846	ENSPFOG00000007511	mbd1b	50	37.640	Poecilia_formosa
ENSANAG00000036253	MBD1	65	31.702	ENSPLAG00000021258	mbd1b	50	37.640	Poecilia_latipinna
ENSANAG00000036253	MBD1	63	53.846	ENSPMEG00000024145	mbd1b	50	37.640	Poecilia_mexicana
ENSANAG00000036253	MBD1	65	31.702	ENSPREG00000021805	mbd1b	50	37.640	Poecilia_reticulata
ENSANAG00000036253	MBD1	100	93.016	ENSPPYG00000009158	MBD1	89	96.791	Pongo_abelii
ENSANAG00000036253	MBD1	97	74.590	ENSPCAG00000001648	MBD1	93	87.405	Procavia_capensis
ENSANAG00000036253	MBD1	99	90.534	ENSPCOG00000012450	MBD1	99	90.534	Propithecus_coquereli
ENSANAG00000036253	MBD1	100	53.130	ENSRNOG00000024104	Mbd1	98	56.283	Rattus_norvegicus
ENSANAG00000036253	MBD1	97	93.393	ENSRBIG00000041294	MBD1	99	93.393	Rhinopithecus_bieti
ENSANAG00000036253	MBD1	100	96.190	ENSRROG00000032517	MBD1	100	96.190	Rhinopithecus_roxellana
ENSANAG00000036253	MBD1	100	97.405	ENSSBOG00000027169	MBD1	100	97.405	Saimiri_boliviensis_boliviensis
ENSANAG00000036253	MBD1	84	46.253	ENSSHAG00000003661	-	100	47.335	Sarcophilus_harrisii
ENSANAG00000036253	MBD1	62	32.360	ENSSPAG00000021447	mbd1b	51	38.235	Stegastes_partitus
ENSANAG00000036253	MBD1	100	82.962	ENSSSCG00000004516	MBD1	98	87.954	Sus_scrofa
ENSANAG00000036253	MBD1	51	51.724	ENSTRUG00000013422	mbd1b	50	30.597	Takifugu_rubripes
ENSANAG00000036253	MBD1	73	81.857	ENSTBEG00000012651	-	68	82.500	Tupaia_belangeri
ENSANAG00000036253	MBD1	100	80.380	ENSTTRG00000015523	MBD1	98	84.007	Tursiops_truncatus
ENSANAG00000036253	MBD1	99	81.541	ENSUAMG00000004752	MBD1	98	82.799	Ursus_americanus
ENSANAG00000036253	MBD1	99	85.692	ENSUMAG00000002947	MBD1	98	86.195	Ursus_maritimus