EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000036514 (Gene tree)
Gene ID: 105731507
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 17920 bases
Position: chrKZ202902.1:711756-729675
Accession: 105731507
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000038116	CPSF_A	PF03178.15	1.6e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000056204	CPSF1-201	4329	XM_012473284	ENSANAP00000038116	1442 (aa)	XP_012328707	A0A2K5EY40

Gene Model

Click here to download ENSANAG00000036514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000036514's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000036514	CPSF1	100	98.960	ENSG00000071894	CPSF1	100	98.960	Homo_sapiens
ENSANAG00000036514	CPSF1	100	78.176	ENSAPOG00000019621	cpsf1	100	78.041	Acanthochromis_polyacanthus
ENSANAG00000036514	CPSF1	97	94.853	ENSAMEG00000005557	CPSF1	100	94.853	Ailuropoda_melanoleuca
ENSANAG00000036514	CPSF1	100	78.270	ENSACIG00000006112	cpsf1	100	78.062	Amphilophus_citrinellus
ENSANAG00000036514	CPSF1	100	79.600	ENSAOCG00000007120	cpsf1	100	79.394	Amphiprion_ocellaris
ENSANAG00000036514	CPSF1	100	79.876	ENSAPEG00000005755	cpsf1	100	79.669	Amphiprion_percula
ENSANAG00000036514	CPSF1	100	77.815	ENSATEG00000011097	cpsf1	100	78.018	Anabas_testudineus
ENSANAG00000036514	CPSF1	93	81.696	ENSACAG00000009655	CPSF1	100	81.696	Anolis_carolinensis
ENSANAG00000036514	CPSF1	100	77.509	ENSACLG00000012231	cpsf1	99	78.466	Astatotilapia_calliptera
ENSANAG00000036514	CPSF1	100	73.946	ENSAMXG00000008485	cpsf1	100	74.015	Astyanax_mexicanus
ENSANAG00000036514	CPSF1	100	94.694	ENSBTAG00000008355	CPSF1	100	94.960	Bos_taurus
ENSANAG00000036514	CPSF1	100	32.150	WBGene00022301	cpsf-1	100	40.282	Caenorhabditis_elegans
ENSANAG00000036514	CPSF1	100	99.515	ENSCJAG00000021421	CPSF1	100	99.515	Callithrix_jacchus
ENSANAG00000036514	CPSF1	97	96.212	ENSCAFG00000001600	CPSF1	100	96.570	Canis_familiaris
ENSANAG00000036514	CPSF1	100	96.401	ENSCAFG00020020821	CPSF1	100	96.401	Canis_lupus_dingo
ENSANAG00000036514	CPSF1	100	90.972	ENSCHIG00000015833	CPSF1	100	90.972	Capra_hircus
ENSANAG00000036514	CPSF1	100	97.989	ENSTSYG00000028560	CPSF1	99	99.123	Carlito_syrichta
ENSANAG00000036514	CPSF1	97	95.341	ENSCAPG00000014921	CPSF1	99	95.341	Cavia_aperea
ENSANAG00000036514	CPSF1	100	94.941	ENSCPOG00000011448	CPSF1	100	94.941	Cavia_porcellus
ENSANAG00000036514	CPSF1	100	99.653	ENSCCAG00000037658	CPSF1	100	99.653	Cebus_capucinus
ENSANAG00000036514	CPSF1	100	98.821	ENSCATG00000037234	CPSF1	100	98.821	Cercocebus_atys
ENSANAG00000036514	CPSF1	100	96.602	ENSCLAG00000012166	CPSF1	100	96.602	Chinchilla_lanigera
ENSANAG00000036514	CPSF1	100	98.752	ENSCSAG00000008502	CPSF1	100	98.752	Chlorocebus_sabaeus
ENSANAG00000036514	CPSF1	99	87.544	ENSCPBG00000018910	CPSF1	96	87.544	Chrysemys_picta_bellii
ENSANAG00000036514	CPSF1	96	48.637	ENSCING00000000514	-	100	48.565	Ciona_intestinalis
ENSANAG00000036514	CPSF1	99	48.077	ENSCSAVG00000002293	-	98	49.765	Ciona_savignyi
ENSANAG00000036514	CPSF1	99	93.282	ENSCANG00000032760	CPSF1	99	93.282	Colobus_angolensis_palliatus
ENSANAG00000036514	CPSF1	100	96.463	ENSCGRG00001016344	Cpsf1	100	96.463	Cricetulus_griseus_chok1gshd
ENSANAG00000036514	CPSF1	100	94.383	ENSCGRG00000003118	Cpsf1	100	94.383	Cricetulus_griseus_crigri
ENSANAG00000036514	CPSF1	100	77.701	ENSCSEG00000013464	cpsf1	100	77.632	Cynoglossus_semilaevis
ENSANAG00000036514	CPSF1	85	77.241	ENSCVAG00000014059	cpsf1	100	75.926	Cyprinodon_variegatus
ENSANAG00000036514	CPSF1	100	79.683	ENSDARG00000034178	cpsf1	100	79.752	Danio_rerio
ENSANAG00000036514	CPSF1	57	95.652	ENSDNOG00000043654	CPSF1	94	95.652	Dasypus_novemcinctus
ENSANAG00000036514	CPSF1	97	96.129	ENSDORG00000006278	Cpsf1	99	96.129	Dipodomys_ordii
ENSANAG00000036514	CPSF1	100	45.528	FBgn0024698	Cpsf160	100	45.424	Drosophila_melanogaster
ENSANAG00000036514	CPSF1	80	97.315	ENSETEG00000006022	CPSF1	83	97.315	Echinops_telfairi
ENSANAG00000036514	CPSF1	100	97.024	ENSEASG00005010774	CPSF1	100	97.024	Equus_asinus_asinus
ENSANAG00000036514	CPSF1	100	97.024	ENSECAG00000022209	CPSF1	100	97.024	Equus_caballus
ENSANAG00000036514	CPSF1	100	95.017	ENSEEUG00000000471	CPSF1	100	95.017	Erinaceus_europaeus
ENSANAG00000036514	CPSF1	100	78.562	ENSELUG00000012271	cpsf1	100	78.767	Esox_lucius
ENSANAG00000036514	CPSF1	100	96.671	ENSFDAG00000016060	CPSF1	100	96.671	Fukomys_damarensis
ENSANAG00000036514	CPSF1	100	76.860	ENSFHEG00000016801	cpsf1	100	76.722	Fundulus_heteroclitus
ENSANAG00000036514	CPSF1	100	78.069	ENSGMOG00000000796	cpsf1	100	78.345	Gadus_morhua
ENSANAG00000036514	CPSF1	95	85.714	ENSGAFG00000018890	cpsf1	100	85.714	Gambusia_affinis
ENSANAG00000036514	CPSF1	100	78.655	ENSGACG00000008703	cpsf1	100	78.532	Gasterosteus_aculeatus
ENSANAG00000036514	CPSF1	100	83.748	ENSGAGG00000004276	CPSF1	98	87.500	Gopherus_agassizii
ENSANAG00000036514	CPSF1	100	99.098	ENSGGOG00000016185	CPSF1	100	99.098	Gorilla_gorilla
ENSANAG00000036514	CPSF1	100	79.792	ENSHBUG00000018900	cpsf1	100	79.516	Haplochromis_burtoni
ENSANAG00000036514	CPSF1	100	96.533	ENSHGLG00000016139	CPSF1	100	96.533	Heterocephalus_glaber_female
ENSANAG00000036514	CPSF1	100	96.463	ENSHGLG00100009750	CPSF1	100	96.463	Heterocephalus_glaber_male
ENSANAG00000036514	CPSF1	100	77.085	ENSHCOG00000018509	cpsf1	100	76.934	Hippocampus_comes
ENSANAG00000036514	CPSF1	100	76.632	ENSIPUG00000011259	cpsf1	100	76.632	Ictalurus_punctatus
ENSANAG00000036514	CPSF1	97	96.643	ENSSTOG00000009957	CPSF1	99	96.643	Ictidomys_tridecemlineatus
ENSANAG00000036514	CPSF1	100	96.394	ENSJJAG00000023002	Cpsf1	100	96.394	Jaculus_jaculus
ENSANAG00000036514	CPSF1	91	85.893	ENSKMAG00000001940	cpsf1	99	85.893	Kryptolebias_marmoratus
ENSANAG00000036514	CPSF1	100	77.387	ENSLBEG00000003601	cpsf1	100	77.725	Labrus_bergylta
ENSANAG00000036514	CPSF1	88	81.370	ENSLACG00000000233	CPSF1	92	81.370	Latimeria_chalumnae
ENSANAG00000036514	CPSF1	100	78.330	ENSLOCG00000008484	cpsf1	100	78.468	Lepisosteus_oculatus
ENSANAG00000036514	CPSF1	97	95.494	ENSLAFG00000022601	CPSF1	100	95.494	Loxodonta_africana
ENSANAG00000036514	CPSF1	100	98.821	ENSMFAG00000037013	CPSF1	100	98.821	Macaca_fascicularis
ENSANAG00000036514	CPSF1	100	98.890	ENSMMUG00000007380	CPSF1	100	98.890	Macaca_mulatta
ENSANAG00000036514	CPSF1	97	99.067	ENSMNEG00000043564	CPSF1	100	99.067	Macaca_nemestrina
ENSANAG00000036514	CPSF1	100	98.821	ENSMLEG00000043010	CPSF1	100	98.821	Mandrillus_leucophaeus
ENSANAG00000036514	CPSF1	100	78.378	ENSMAMG00000003803	cpsf1	100	78.243	Mastacembelus_armatus
ENSANAG00000036514	CPSF1	100	77.647	ENSMZEG00005001168	cpsf1	100	77.370	Maylandia_zebra
ENSANAG00000036514	CPSF1	100	96.255	ENSMAUG00000003601	Cpsf1	100	96.255	Mesocricetus_auratus
ENSANAG00000036514	CPSF1	100	97.573	ENSMICG00000015767	CPSF1	100	97.573	Microcebus_murinus
ENSANAG00000036514	CPSF1	100	96.463	ENSMOCG00000022758	Cpsf1	100	96.463	Microtus_ochrogaster
ENSANAG00000036514	CPSF1	100	78.976	ENSMMOG00000021245	cpsf1	100	78.838	Mola_mola
ENSANAG00000036514	CPSF1	100	93.172	ENSMODG00000010755	CPSF1	100	93.172	Monodelphis_domestica
ENSANAG00000036514	CPSF1	100	77.740	ENSMALG00000020545	cpsf1	100	77.673	Monopterus_albus
ENSANAG00000036514	CPSF1	100	96.671	MGP_CAROLIEiJ_G0019936	Cpsf1	100	96.671	Mus_caroli
ENSANAG00000036514	CPSF1	100	96.602	ENSMUSG00000034022	Cpsf1	100	96.602	Mus_musculus
ENSANAG00000036514	CPSF1	100	96.671	MGP_PahariEiJ_G0019946	Cpsf1	100	96.671	Mus_pahari
ENSANAG00000036514	CPSF1	100	96.602	MGP_SPRETEiJ_G0020839	Cpsf1	100	96.602	Mus_spretus
ENSANAG00000036514	CPSF1	94	95.778	ENSMPUG00000006419	CPSF1	93	95.778	Mustela_putorius_furo
ENSANAG00000036514	CPSF1	100	96.394	ENSNGAG00000022460	Cpsf1	100	96.394	Nannospalax_galili
ENSANAG00000036514	CPSF1	100	74.965	ENSNBRG00000000813	cpsf1	100	75.035	Neolamprologus_brichardi
ENSANAG00000036514	CPSF1	86	87.303	ENSNLEG00000010633	-	100	90.278	Nomascus_leucogenys
ENSANAG00000036514	CPSF1	82	96.512	ENSMEUG00000014922	CPSF1	85	96.512	Notamacropus_eugenii
ENSANAG00000036514	CPSF1	61	97.449	ENSOPRG00000004693	-	71	97.449	Ochotona_princeps
ENSANAG00000036514	CPSF1	100	96.741	ENSODEG00000013995	CPSF1	100	96.741	Octodon_degus
ENSANAG00000036514	CPSF1	100	80.069	ENSONIG00000007676	cpsf1	100	79.792	Oreochromis_niloticus
ENSANAG00000036514	CPSF1	58	91.429	ENSOANG00000010716	CPSF1	88	91.429	Ornithorhynchus_anatinus
ENSANAG00000036514	CPSF1	100	77.582	ENSORLG00000013544	cpsf1	92	87.243	Oryzias_latipes
ENSANAG00000036514	CPSF1	100	77.717	ENSORLG00020021693	cpsf1	92	87.243	Oryzias_latipes_hni
ENSANAG00000036514	CPSF1	100	77.566	ENSORLG00015009979	cpsf1	100	77.566	Oryzias_latipes_hsok
ENSANAG00000036514	CPSF1	100	77.446	ENSOMEG00000011849	cpsf1	100	77.740	Oryzias_melastigma
ENSANAG00000036514	CPSF1	100	97.573	ENSOGAG00000000315	CPSF1	100	97.573	Otolemur_garnettii
ENSANAG00000036514	CPSF1	100	99.168	ENSPPAG00000019280	CPSF1	100	99.168	Pan_paniscus
ENSANAG00000036514	CPSF1	100	99.168	ENSPTRG00000049288	-	100	99.168	Pan_troglodytes
ENSANAG00000036514	CPSF1	100	97.478	ENSPTRG00000051253	-	100	97.478	Pan_troglodytes
ENSANAG00000036514	CPSF1	97	98.924	ENSPANG00000015005	CPSF1	100	98.924	Papio_anubis
ENSANAG00000036514	CPSF1	100	80.913	ENSPKIG00000002582	cpsf1	100	81.316	Paramormyrops_kingsleyae
ENSANAG00000036514	CPSF1	100	93.103	ENSPCIG00000009035	CPSF1	100	93.103	Phascolarctos_cinereus
ENSANAG00000036514	CPSF1	100	76.455	ENSPFOG00000012870	cpsf1	100	76.522	Poecilia_formosa
ENSANAG00000036514	CPSF1	100	76.403	ENSPREG00000016307	cpsf1	100	76.268	Poecilia_reticulata
ENSANAG00000036514	CPSF1	100	90.846	ENSPPYG00000018973	CPSF1	100	90.846	Pongo_abelii
ENSANAG00000036514	CPSF1	91	94.886	ENSPCAG00000011541	CPSF1	94	94.886	Procavia_capensis
ENSANAG00000036514	CPSF1	100	93.832	ENSPCOG00000020001	CPSF1	100	93.832	Propithecus_coquereli
ENSANAG00000036514	CPSF1	91	98.571	ENSPVAG00000006761	CPSF1	91	98.571	Pteropus_vampyrus
ENSANAG00000036514	CPSF1	100	78.757	ENSPNYG00000004906	cpsf1	100	78.484	Pundamilia_nyererei
ENSANAG00000036514	CPSF1	100	75.345	ENSPNAG00000024395	cpsf1	100	75.345	Pygocentrus_nattereri
ENSANAG00000036514	CPSF1	100	96.602	ENSRNOG00000030705	Cpsf1	100	96.602	Rattus_norvegicus
ENSANAG00000036514	CPSF1	100	98.821	ENSRBIG00000044907	CPSF1	100	98.821	Rhinopithecus_bieti
ENSANAG00000036514	CPSF1	100	98.752	ENSRROG00000044861	CPSF1	100	98.752	Rhinopithecus_roxellana
ENSANAG00000036514	CPSF1	97	99.570	ENSSBOG00000027177	CPSF1	100	99.570	Saimiri_boliviensis_boliviensis
ENSANAG00000036514	CPSF1	100	92.828	ENSSHAG00000006500	CPSF1	100	92.828	Sarcophilus_harrisii
ENSANAG00000036514	CPSF1	100	78.375	ENSSFOG00015004606	cpsf1	100	81.164	Scleropages_formosus
ENSANAG00000036514	CPSF1	100	77.808	ENSSMAG00000020547	cpsf1	100	77.943	Scophthalmus_maximus
ENSANAG00000036514	CPSF1	100	79.337	ENSSDUG00000001100	cpsf1	100	79.406	Seriola_dumerili
ENSANAG00000036514	CPSF1	100	79.599	ENSSLDG00000003619	cpsf1	100	79.391	Seriola_lalandi_dorsalis
ENSANAG00000036514	CPSF1	89	95.833	ENSSARG00000003643	CPSF1	92	95.833	Sorex_araneus
ENSANAG00000036514	CPSF1	96	87.527	ENSSPUG00000014396	CPSF1	100	87.527	Sphenodon_punctatus
ENSANAG00000036514	CPSF1	100	78.161	ENSSPAG00000005349	cpsf1	100	78.026	Stegastes_partitus
ENSANAG00000036514	CPSF1	100	96.055	ENSSSCG00000005906	CPSF1	100	96.055	Sus_scrofa
ENSANAG00000036514	CPSF1	96	77.972	ENSTRUG00000013134	cpsf1	99	77.902	Takifugu_rubripes
ENSANAG00000036514	CPSF1	100	78.763	ENSTNIG00000014027	cpsf1	100	78.557	Tetraodon_nigroviridis
ENSANAG00000036514	CPSF1	77	89.310	ENSTBEG00000001756	CPSF1	91	89.310	Tupaia_belangeri
ENSANAG00000036514	CPSF1	90	96.546	ENSTTRG00000001937	CPSF1	90	96.546	Tursiops_truncatus
ENSANAG00000036514	CPSF1	97	96.569	ENSUAMG00000006476	CPSF1	98	96.569	Ursus_americanus
ENSANAG00000036514	CPSF1	100	77.801	ENSXCOG00000003608	cpsf1	100	77.593	Xiphophorus_couchianus
ENSANAG00000036514	CPSF1	100	77.279	ENSXMAG00000005798	cpsf1	100	77.210	Xiphophorus_maculatus