EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000036625 (Gene tree)
Gene ID: 105706416
Gene Symbol: SNRNP200
Alias: -
Full Name: U5 small nuclear ribonucleoprotein 200 kDa helicase
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 30305 bases
Position: chrKZ200234.1:886697-917001
Accession: 105706416
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000038670	ResIII	PF04851.15	1.7e-25	1	2
ENSANAP00000038670	ResIII	PF04851.15	1.7e-25	2	2
ENSANAP00000038670	DEAD	PF00270.29	6.6e-52	1	2
ENSANAP00000038670	DEAD	PF00270.29	6.6e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000056764	SNRNP200-201	6258	XM_021671789	ENSANAP00000038670	2085 (aa)	XP_021527464	A0A2K5EZS9
ENSANAT00000056769	SNRNP200-202	1674	-	ENSANAP00000038675	557 (aa)	-	A0A2K5EZT4

Gene Model

Click here to download ENSANAG00000036625's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000036625's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000036625	SNRNP200	88	42.019	ENSANAG00000021476	ASCC3	80	44.169
ENSANAG00000036625	SNRNP200	68	32.625	ENSANAG00000029513	HFM1	56	32.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000036625	SNRNP200	100	95.849	ENSG00000144028	SNRNP200	99	99.659	Homo_sapiens
ENSANAG00000036625	SNRNP200	99	88.144	ENSAPOG00000010223	snrnp200	99	88.043	Acanthochromis_polyacanthus
ENSANAG00000036625	SNRNP200	100	95.709	ENSAMEG00000008996	SNRNP200	100	95.289	Ailuropoda_melanoleuca
ENSANAG00000036625	SNRNP200	97	87.080	ENSACIG00000001764	snrnp200	98	87.080	Amphilophus_citrinellus
ENSANAG00000036625	SNRNP200	99	88.004	ENSAOCG00000024593	snrnp200	99	87.903	Amphiprion_ocellaris
ENSANAG00000036625	SNRNP200	97	86.919	ENSAPEG00000012554	snrnp200	100	86.919	Amphiprion_percula
ENSANAG00000036625	SNRNP200	99	87.863	ENSATEG00000022522	snrnp200	99	87.763	Anabas_testudineus
ENSANAG00000036625	SNRNP200	99	93.565	ENSAPLG00000004313	SNRNP200	100	93.142	Anas_platyrhynchos
ENSANAG00000036625	SNRNP200	99	92.410	ENSACAG00000000434	SNRNP200	100	91.889	Anolis_carolinensis
ENSANAG00000036625	SNRNP200	99	87.723	ENSACLG00000011188	snrnp200	99	87.623	Astatotilapia_calliptera
ENSANAG00000036625	SNRNP200	99	87.769	ENSAMXG00000005684	snrnp200	99	86.521	Astyanax_mexicanus
ENSANAG00000036625	SNRNP200	100	95.149	ENSBTAG00000000848	SNRNP200	100	94.729	Bos_taurus
ENSANAG00000036625	SNRNP200	100	95.896	ENSCJAG00000007514	SNRNP200	100	95.476	Callithrix_jacchus
ENSANAG00000036625	SNRNP200	100	94.933	ENSCAFG00020019979	SNRNP200	100	99.535	Canis_lupus_dingo
ENSANAG00000036625	SNRNP200	100	95.336	ENSCHIG00000020611	SNRNP200	100	94.916	Capra_hircus
ENSANAG00000036625	SNRNP200	100	95.756	ENSTSYG00000010467	SNRNP200	100	95.336	Carlito_syrichta
ENSANAG00000036625	SNRNP200	99	95.634	ENSCAPG00000017234	SNRNP200	99	95.211	Cavia_aperea
ENSANAG00000036625	SNRNP200	100	95.569	ENSCPOG00000006776	SNRNP200	100	95.149	Cavia_porcellus
ENSANAG00000036625	SNRNP200	100	95.896	ENSCCAG00000033962	SNRNP200	100	95.476	Cebus_capucinus
ENSANAG00000036625	SNRNP200	100	95.849	ENSCATG00000015790	SNRNP200	100	95.429	Cercocebus_atys
ENSANAG00000036625	SNRNP200	100	95.429	ENSCLAG00000004116	SNRNP200	100	95.009	Chinchilla_lanigera
ENSANAG00000036625	SNRNP200	100	95.802	ENSCSAG00000017369	SNRNP200	100	95.382	Chlorocebus_sabaeus
ENSANAG00000036625	SNRNP200	76	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSANAG00000036625	SNRNP200	100	95.452	ENSCPBG00000022571	SNRNP200	99	97.872	Chrysemys_picta_bellii
ENSANAG00000036625	SNRNP200	99	74.138	ENSCING00000005082	-	99	73.625	Ciona_intestinalis
ENSANAG00000036625	SNRNP200	100	94.148	ENSCANG00000033932	SNRNP200	99	97.794	Colobus_angolensis_palliatus
ENSANAG00000036625	SNRNP200	100	95.662	ENSCGRG00001022610	Snrnp200	100	95.154	Cricetulus_griseus_chok1gshd
ENSANAG00000036625	SNRNP200	100	95.109	ENSCGRG00000016472	Snrnp200	100	94.602	Cricetulus_griseus_crigri
ENSANAG00000036625	SNRNP200	100	87.202	ENSCSEG00000016399	snrnp200	100	87.202	Cynoglossus_semilaevis
ENSANAG00000036625	SNRNP200	100	81.971	ENSCVAG00000017631	snrnp200	99	82.158	Cyprinodon_variegatus
ENSANAG00000036625	SNRNP200	100	86.334	ENSDARG00000077536	snrnp200	99	86.381	Danio_rerio
ENSANAG00000036625	SNRNP200	100	94.216	ENSDNOG00000011227	SNRNP200	100	93.797	Dasypus_novemcinctus
ENSANAG00000036625	SNRNP200	100	97.775	ENSDORG00000005861	Snrnp200	100	97.775	Dipodomys_ordii
ENSANAG00000036625	SNRNP200	100	71.203	FBgn0263599	l(3)72Ab	99	71.110	Drosophila_melanogaster
ENSANAG00000036625	SNRNP200	95	94.353	ENSETEG00000000162	SNRNP200	74	94.353	Echinops_telfairi
ENSANAG00000036625	SNRNP200	85	80.893	ENSEBUG00000016524	snrnp200	95	80.893	Eptatretus_burgeri
ENSANAG00000036625	SNRNP200	100	95.721	ENSEASG00005001884	SNRNP200	100	95.535	Equus_asinus_asinus
ENSANAG00000036625	SNRNP200	100	95.709	ENSECAG00000019675	SNRNP200	99	98.790	Equus_caballus
ENSANAG00000036625	SNRNP200	90	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSANAG00000036625	SNRNP200	99	88.097	ENSELUG00000018948	snrnp200	99	87.996	Esox_lucius
ENSANAG00000036625	SNRNP200	100	95.756	ENSFCAG00000010699	SNRNP200	100	95.336	Felis_catus
ENSANAG00000036625	SNRNP200	96	89.704	ENSFALG00000001368	-	95	89.704	Ficedula_albicollis
ENSANAG00000036625	SNRNP200	100	95.476	ENSFDAG00000004683	SNRNP200	100	95.056	Fukomys_damarensis
ENSANAG00000036625	SNRNP200	100	84.166	ENSFHEG00000003786	snrnp200	99	84.353	Fundulus_heteroclitus
ENSANAG00000036625	SNRNP200	100	86.900	ENSGMOG00000004881	snrnp200	99	86.853	Gadus_morhua
ENSANAG00000036625	SNRNP200	100	84.587	ENSGAFG00000010807	snrnp200	99	84.587	Gambusia_affinis
ENSANAG00000036625	SNRNP200	100	87.279	ENSGACG00000011474	snrnp200	99	87.185	Gasterosteus_aculeatus
ENSANAG00000036625	SNRNP200	100	97.791	ENSGAGG00000016069	SNRNP200	100	97.222	Gopherus_agassizii
ENSANAG00000036625	SNRNP200	100	95.849	ENSGGOG00000005174	SNRNP200	100	95.429	Gorilla_gorilla
ENSANAG00000036625	SNRNP200	97	84.619	ENSHBUG00000011322	snrnp200	99	84.665	Haplochromis_burtoni
ENSANAG00000036625	SNRNP200	100	95.569	ENSHGLG00000006654	SNRNP200	100	95.149	Heterocephalus_glaber_female
ENSANAG00000036625	SNRNP200	100	95.569	ENSHGLG00100018594	SNRNP200	100	95.149	Heterocephalus_glaber_male
ENSANAG00000036625	SNRNP200	100	95.709	ENSSTOG00000016351	SNRNP200	100	95.289	Ictidomys_tridecemlineatus
ENSANAG00000036625	SNRNP200	100	95.522	ENSJJAG00000023659	Snrnp200	100	95.103	Jaculus_jaculus
ENSANAG00000036625	SNRNP200	100	83.706	ENSKMAG00000003665	snrnp200	99	84.125	Kryptolebias_marmoratus
ENSANAG00000036625	SNRNP200	100	87.529	ENSLBEG00000021585	snrnp200	99	87.529	Labrus_bergylta
ENSANAG00000036625	SNRNP200	84	94.394	ENSLACG00000000226	SNRNP200	99	94.394	Latimeria_chalumnae
ENSANAG00000036625	SNRNP200	100	88.013	ENSLOCG00000015198	snrnp200	99	88.013	Lepisosteus_oculatus
ENSANAG00000036625	SNRNP200	100	95.336	ENSLAFG00000015626	SNRNP200	100	94.916	Loxodonta_africana
ENSANAG00000036625	SNRNP200	100	95.802	ENSMFAG00000040174	SNRNP200	99	98.271	Macaca_fascicularis
ENSANAG00000036625	SNRNP200	100	95.802	ENSMMUG00000023261	SNRNP200	100	95.382	Macaca_mulatta
ENSANAG00000036625	SNRNP200	100	95.756	ENSMNEG00000032398	SNRNP200	100	95.336	Macaca_nemestrina
ENSANAG00000036625	SNRNP200	100	95.849	ENSMLEG00000019083	SNRNP200	99	98.271	Mandrillus_leucophaeus
ENSANAG00000036625	SNRNP200	100	87.488	ENSMAMG00000007851	snrnp200	99	87.442	Mastacembelus_armatus
ENSANAG00000036625	SNRNP200	97	84.619	ENSMZEG00005010787	snrnp200	99	84.665	Maylandia_zebra
ENSANAG00000036625	SNRNP200	97	93.012	ENSMGAG00000001831	SNRNP200	99	94.146	Meleagris_gallopavo
ENSANAG00000036625	SNRNP200	100	95.709	ENSMAUG00000011825	Snrnp200	100	95.200	Mesocricetus_auratus
ENSANAG00000036625	SNRNP200	100	95.709	ENSMICG00000004710	SNRNP200	98	97.500	Microcebus_murinus
ENSANAG00000036625	SNRNP200	100	96.383	ENSMOCG00000011814	Snrnp200	100	96.383	Microtus_ochrogaster
ENSANAG00000036625	SNRNP200	99	86.270	ENSMMOG00000014167	snrnp200	99	86.175	Mola_mola
ENSANAG00000036625	SNRNP200	100	94.823	ENSMODG00000008475	SNRNP200	100	94.403	Monodelphis_domestica
ENSANAG00000036625	SNRNP200	99	88.051	ENSMALG00000001973	snrnp200	99	87.950	Monopterus_albus
ENSANAG00000036625	SNRNP200	100	95.522	MGP_CAROLIEiJ_G0024250	Snrnp200	100	95.014	Mus_caroli
ENSANAG00000036625	SNRNP200	100	95.569	ENSMUSG00000003660	Snrnp200	100	95.061	Mus_musculus
ENSANAG00000036625	SNRNP200	100	95.616	MGP_PahariEiJ_G0025695	Snrnp200	100	95.107	Mus_pahari
ENSANAG00000036625	SNRNP200	100	95.569	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.724	Mus_spretus
ENSANAG00000036625	SNRNP200	100	95.662	ENSMPUG00000008949	SNRNP200	100	95.243	Mustela_putorius_furo
ENSANAG00000036625	SNRNP200	100	94.737	ENSMLUG00000010493	SNRNP200	100	94.737	Myotis_lucifugus
ENSANAG00000036625	SNRNP200	100	91.278	ENSMLUG00000027511	-	100	91.278	Myotis_lucifugus
ENSANAG00000036625	SNRNP200	100	95.756	ENSNGAG00000021993	Snrnp200	100	95.336	Nannospalax_galili
ENSANAG00000036625	SNRNP200	93	89.792	ENSNBRG00000017960	snrnp200	98	89.844	Neolamprologus_brichardi
ENSANAG00000036625	SNRNP200	100	91.323	ENSNLEG00000000025	SNRNP200	100	91.156	Nomascus_leucogenys
ENSANAG00000036625	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSANAG00000036625	SNRNP200	100	91.838	ENSOPRG00000015464	SNRNP200	100	91.418	Ochotona_princeps
ENSANAG00000036625	SNRNP200	100	96.347	ENSODEG00000008366	SNRNP200	100	96.347	Octodon_degus
ENSANAG00000036625	SNRNP200	99	87.723	ENSONIG00000010714	snrnp200	99	87.623	Oreochromis_niloticus
ENSANAG00000036625	SNRNP200	100	95.616	ENSOCUG00000009864	SNRNP200	100	95.196	Oryctolagus_cuniculus
ENSANAG00000036625	SNRNP200	100	86.688	ENSORLG00000012286	snrnp200	100	86.875	Oryzias_latipes
ENSANAG00000036625	SNRNP200	100	86.782	ENSORLG00020004648	snrnp200	100	86.969	Oryzias_latipes_hni
ENSANAG00000036625	SNRNP200	100	86.735	ENSORLG00015019114	snrnp200	99	89.944	Oryzias_latipes_hsok
ENSANAG00000036625	SNRNP200	99	86.926	ENSOMEG00000011834	snrnp200	99	87.015	Oryzias_melastigma
ENSANAG00000036625	SNRNP200	100	95.756	ENSOGAG00000006879	SNRNP200	100	95.336	Otolemur_garnettii
ENSANAG00000036625	SNRNP200	100	94.356	ENSOARG00000013949	SNRNP200	100	93.937	Ovis_aries
ENSANAG00000036625	SNRNP200	100	95.849	ENSPPAG00000041559	SNRNP200	100	95.429	Pan_paniscus
ENSANAG00000036625	SNRNP200	100	95.756	ENSPPRG00000004435	SNRNP200	100	95.336	Panthera_pardus
ENSANAG00000036625	SNRNP200	100	95.289	ENSPTIG00000006380	SNRNP200	100	94.869	Panthera_tigris_altaica
ENSANAG00000036625	SNRNP200	100	95.849	ENSPTRG00000012230	SNRNP200	100	95.429	Pan_troglodytes
ENSANAG00000036625	SNRNP200	100	95.802	ENSPANG00000006017	SNRNP200	100	95.382	Papio_anubis
ENSANAG00000036625	SNRNP200	100	88.277	ENSPKIG00000014762	snrnp200	99	88.277	Paramormyrops_kingsleyae
ENSANAG00000036625	SNRNP200	100	92.214	ENSPSIG00000008580	SNRNP200	100	92.214	Pelodiscus_sinensis
ENSANAG00000036625	SNRNP200	100	94.823	ENSPCIG00000023050	SNRNP200	100	94.403	Phascolarctos_cinereus
ENSANAG00000036625	SNRNP200	100	86.741	ENSPFOG00000015110	snrnp200	99	86.928	Poecilia_formosa
ENSANAG00000036625	SNRNP200	97	85.973	ENSPLAG00000006711	snrnp200	99	86.192	Poecilia_latipinna
ENSANAG00000036625	SNRNP200	97	85.918	ENSPMEG00000021166	snrnp200	99	86.137	Poecilia_mexicana
ENSANAG00000036625	SNRNP200	100	87.015	ENSPREG00000008875	snrnp200	99	87.015	Poecilia_reticulata
ENSANAG00000036625	SNRNP200	100	95.849	ENSPPYG00000012068	SNRNP200	100	95.429	Pongo_abelii
ENSANAG00000036625	SNRNP200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSANAG00000036625	SNRNP200	100	95.756	ENSPCOG00000024608	SNRNP200	100	95.336	Propithecus_coquereli
ENSANAG00000036625	SNRNP200	96	97.556	ENSPVAG00000005860	SNRNP200	93	97.556	Pteropus_vampyrus
ENSANAG00000036625	SNRNP200	99	83.318	ENSPNYG00000017476	snrnp200	99	83.232	Pundamilia_nyererei
ENSANAG00000036625	SNRNP200	100	82.205	ENSPNAG00000010998	snrnp200	99	82.205	Pygocentrus_nattereri
ENSANAG00000036625	SNRNP200	100	95.709	ENSRNOG00000012157	Snrnp200	100	95.200	Rattus_norvegicus
ENSANAG00000036625	SNRNP200	100	95.849	ENSRBIG00000044690	-	100	95.429	Rhinopithecus_bieti
ENSANAG00000036625	SNRNP200	100	95.849	ENSRROG00000037952	-	100	95.429	Rhinopithecus_roxellana
ENSANAG00000036625	SNRNP200	100	95.896	ENSSBOG00000035471	SNRNP200	100	95.476	Saimiri_boliviensis_boliviensis
ENSANAG00000036625	SNRNP200	97	94.602	ENSSHAG00000000758	SNRNP200	100	94.169	Sarcophilus_harrisii
ENSANAG00000036625	SNRNP200	99	87.582	ENSSFOG00015018826	snrnp200	99	87.716	Scleropages_formosus
ENSANAG00000036625	SNRNP200	99	87.723	ENSSMAG00000005463	snrnp200	99	87.623	Scophthalmus_maximus
ENSANAG00000036625	SNRNP200	99	87.957	ENSSDUG00000021410	snrnp200	99	87.856	Seriola_dumerili
ENSANAG00000036625	SNRNP200	99	87.910	ENSSLDG00000010884	snrnp200	99	87.809	Seriola_lalandi_dorsalis
ENSANAG00000036625	SNRNP200	95	94.825	ENSSARG00000010728	SNRNP200	96	94.825	Sorex_araneus
ENSANAG00000036625	SNRNP200	100	93.044	ENSSPUG00000003726	-	100	93.044	Sphenodon_punctatus
ENSANAG00000036625	SNRNP200	99	88.004	ENSSPAG00000001842	snrnp200	99	87.903	Stegastes_partitus
ENSANAG00000036625	SNRNP200	100	95.569	ENSSSCG00000008127	SNRNP200	100	95.149	Sus_scrofa
ENSANAG00000036625	SNRNP200	99	82.906	ENSTGUG00000014475	-	100	82.906	Taeniopygia_guttata
ENSANAG00000036625	SNRNP200	99	87.629	ENSTRUG00000001307	snrnp200	99	87.529	Takifugu_rubripes
ENSANAG00000036625	SNRNP200	100	86.228	ENSTNIG00000004320	snrnp200	100	86.228	Tetraodon_nigroviridis
ENSANAG00000036625	SNRNP200	82	100.000	ENSTBEG00000003329	-	65	100.000	Tupaia_belangeri
ENSANAG00000036625	SNRNP200	100	95.660	ENSTTRG00000004983	SNRNP200	100	95.054	Tursiops_truncatus
ENSANAG00000036625	SNRNP200	74	94.810	ENSUAMG00000008395	-	95	94.810	Ursus_americanus
ENSANAG00000036625	SNRNP200	100	95.756	ENSUMAG00000012385	SNRNP200	100	95.336	Ursus_maritimus
ENSANAG00000036625	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSANAG00000036625	SNRNP200	100	95.942	ENSVVUG00000026247	SNRNP200	100	95.522	Vulpes_vulpes
ENSANAG00000036625	SNRNP200	100	90.592	ENSXETG00000001243	snrnp200	100	89.577	Xenopus_tropicalis
ENSANAG00000036625	SNRNP200	97	86.065	ENSXMAG00000002058	snrnp200	98	86.546	Xiphophorus_maculatus