EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000036716 (Gene tree)
Gene ID: 105711719
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 82859 bases
Position: chrKZ206965.1:21053419-21136277
Accession: 105711719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000038612	zf-CCCH	PF00642.24	0.00031	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000056706	RC3H1-201	3798	XM_012444576	ENSANAP00000038612	1133 (aa)	XP_012299999	A0A2K5EZE8

Gene Model

Click here to download ENSANAG00000036716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000036716's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000036716	RC3H1	92	54.304	ENSANAG00000030862	RC3H2	94	83.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000036716	RC3H1	100	98.941	ENSG00000135870	RC3H1	100	98.941	Homo_sapiens
ENSANAG00000036716	RC3H1	100	97.176	ENSAMEG00000015657	RC3H1	100	97.176	Ailuropoda_melanoleuca
ENSANAG00000036716	RC3H1	100	88.143	ENSAPLG00000005341	RC3H1	100	88.056	Anas_platyrhynchos
ENSANAG00000036716	RC3H1	100	85.166	ENSACAG00000015271	RC3H1	100	85.166	Anolis_carolinensis
ENSANAG00000036716	RC3H1	100	95.852	ENSBTAG00000052708	RC3H1	100	95.852	Bos_taurus
ENSANAG00000036716	RC3H1	100	99.470	ENSCJAG00000009106	RC3H1	100	99.470	Callithrix_jacchus
ENSANAG00000036716	RC3H1	100	97.264	ENSCAFG00000014434	RC3H1	100	97.264	Canis_familiaris
ENSANAG00000036716	RC3H1	100	97.178	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSANAG00000036716	RC3H1	100	96.205	ENSCHIG00000002873	RC3H1	100	96.205	Capra_hircus
ENSANAG00000036716	RC3H1	99	95.499	ENSTSYG00000003913	RC3H1	99	95.410	Carlito_syrichta
ENSANAG00000036716	RC3H1	100	91.446	ENSCPOG00000004349	RC3H1	100	91.093	Cavia_porcellus
ENSANAG00000036716	RC3H1	100	97.440	ENSCCAG00000025652	RC3H1	100	97.440	Cebus_capucinus
ENSANAG00000036716	RC3H1	100	99.117	ENSCATG00000033497	RC3H1	100	99.117	Cercocebus_atys
ENSANAG00000036716	RC3H1	100	94.797	ENSCLAG00000011267	RC3H1	100	94.709	Chinchilla_lanigera
ENSANAG00000036716	RC3H1	96	99.079	ENSCSAG00000011823	RC3H1	85	99.079	Chlorocebus_sabaeus
ENSANAG00000036716	RC3H1	100	89.474	ENSCPBG00000014670	RC3H1	100	96.304	Chrysemys_picta_bellii
ENSANAG00000036716	RC3H1	100	99.118	ENSCANG00000032120	RC3H1	100	99.118	Colobus_angolensis_palliatus
ENSANAG00000036716	RC3H1	100	94.351	ENSCGRG00001020812	Rc3h1	100	93.910	Cricetulus_griseus_chok1gshd
ENSANAG00000036716	RC3H1	100	94.351	ENSCGRG00000011952	Rc3h1	100	93.910	Cricetulus_griseus_crigri
ENSANAG00000036716	RC3H1	55	95.177	ENSDNOG00000011494	RC3H1	99	95.177	Dasypus_novemcinctus
ENSANAG00000036716	RC3H1	100	95.763	ENSDORG00000004855	Rc3h1	100	95.763	Dipodomys_ordii
ENSANAG00000036716	RC3H1	81	96.647	ENSETEG00000012064	RC3H1	87	96.647	Echinops_telfairi
ENSANAG00000036716	RC3H1	100	96.205	ENSEASG00005017000	RC3H1	100	96.205	Equus_asinus_asinus
ENSANAG00000036716	RC3H1	100	96.028	ENSECAG00000021208	RC3H1	100	96.028	Equus_caballus
ENSANAG00000036716	RC3H1	89	83.673	ENSEEUG00000014861	RC3H1	93	83.673	Erinaceus_europaeus
ENSANAG00000036716	RC3H1	100	97.882	ENSFCAG00000014924	RC3H1	100	97.882	Felis_catus
ENSANAG00000036716	RC3H1	100	87.074	ENSFALG00000002947	RC3H1	100	86.463	Ficedula_albicollis
ENSANAG00000036716	RC3H1	100	94.885	ENSFDAG00000013303	RC3H1	100	94.797	Fukomys_damarensis
ENSANAG00000036716	RC3H1	100	87.117	ENSGALG00000004587	RC3H1	100	87.029	Gallus_gallus
ENSANAG00000036716	RC3H1	100	87.818	ENSGAGG00000018194	RC3H1	100	87.993	Gopherus_agassizii
ENSANAG00000036716	RC3H1	100	91.996	ENSGGOG00000005735	RC3H1	100	91.996	Gorilla_gorilla
ENSANAG00000036716	RC3H1	88	88.498	ENSHGLG00000004183	-	99	88.451	Heterocephalus_glaber_female
ENSANAG00000036716	RC3H1	100	94.268	ENSHGLG00100008577	RC3H1	100	94.180	Heterocephalus_glaber_male
ENSANAG00000036716	RC3H1	100	96.561	ENSSTOG00000016033	RC3H1	100	96.561	Ictidomys_tridecemlineatus
ENSANAG00000036716	RC3H1	100	95.057	ENSJJAG00000018915	Rc3h1	100	94.881	Jaculus_jaculus
ENSANAG00000036716	RC3H1	100	75.043	ENSLACG00000016186	RC3H1	100	78.069	Latimeria_chalumnae
ENSANAG00000036716	RC3H1	97	97.541	ENSLAFG00000004367	RC3H1	100	97.541	Loxodonta_africana
ENSANAG00000036716	RC3H1	100	99.029	ENSMFAG00000033725	RC3H1	100	99.029	Macaca_fascicularis
ENSANAG00000036716	RC3H1	100	98.941	ENSMMUG00000000630	RC3H1	100	98.941	Macaca_mulatta
ENSANAG00000036716	RC3H1	100	99.117	ENSMNEG00000035968	RC3H1	100	99.117	Macaca_nemestrina
ENSANAG00000036716	RC3H1	100	99.029	ENSMLEG00000037455	RC3H1	100	99.029	Mandrillus_leucophaeus
ENSANAG00000036716	RC3H1	97	94.254	ENSMAUG00000020864	Rc3h1	100	93.750	Mesocricetus_auratus
ENSANAG00000036716	RC3H1	100	97.529	ENSMICG00000003000	RC3H1	100	97.529	Microcebus_murinus
ENSANAG00000036716	RC3H1	93	93.087	ENSMOCG00000016587	Rc3h1	98	92.614	Microtus_ochrogaster
ENSANAG00000036716	RC3H1	100	92.240	ENSMODG00000004289	RC3H1	100	92.328	Monodelphis_domestica
ENSANAG00000036716	RC3H1	100	93.910	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.380	Mus_caroli
ENSANAG00000036716	RC3H1	100	93.733	ENSMUSG00000040423	Rc3h1	100	93.204	Mus_musculus
ENSANAG00000036716	RC3H1	100	93.557	MGP_PahariEiJ_G0027992	Rc3h1	100	93.027	Mus_pahari
ENSANAG00000036716	RC3H1	100	93.557	MGP_SPRETEiJ_G0015563	Rc3h1	100	93.027	Mus_spretus
ENSANAG00000036716	RC3H1	100	97.090	ENSMPUG00000004747	RC3H1	100	97.090	Mustela_putorius_furo
ENSANAG00000036716	RC3H1	100	95.587	ENSMLUG00000011127	RC3H1	100	95.587	Myotis_lucifugus
ENSANAG00000036716	RC3H1	100	95.763	ENSNGAG00000011135	Rc3h1	100	95.234	Nannospalax_galili
ENSANAG00000036716	RC3H1	100	98.853	ENSNLEG00000015327	RC3H1	100	98.853	Nomascus_leucogenys
ENSANAG00000036716	RC3H1	99	83.289	ENSOPRG00000013068	RC3H1	99	83.201	Ochotona_princeps
ENSANAG00000036716	RC3H1	100	94.621	ENSODEG00000014185	RC3H1	100	94.533	Octodon_degus
ENSANAG00000036716	RC3H1	100	91.528	ENSOANG00000000924	RC3H1	100	91.441	Ornithorhynchus_anatinus
ENSANAG00000036716	RC3H1	99	96.150	ENSOCUG00000004930	RC3H1	98	96.061	Oryctolagus_cuniculus
ENSANAG00000036716	RC3H1	100	90.220	ENSOGAG00000004044	RC3H1	100	90.132	Otolemur_garnettii
ENSANAG00000036716	RC3H1	100	96.404	ENSOARG00000013011	RC3H1	100	96.404	Ovis_aries
ENSANAG00000036716	RC3H1	100	98.942	ENSPPAG00000039253	RC3H1	100	98.942	Pan_paniscus
ENSANAG00000036716	RC3H1	100	97.087	ENSPPRG00000009007	RC3H1	100	97.087	Panthera_pardus
ENSANAG00000036716	RC3H1	100	97.452	ENSPTIG00000015326	RC3H1	100	97.452	Panthera_tigris_altaica
ENSANAG00000036716	RC3H1	100	98.942	ENSPTRG00000001702	RC3H1	100	98.942	Pan_troglodytes
ENSANAG00000036716	RC3H1	100	99.029	ENSPANG00000008886	RC3H1	100	99.029	Papio_anubis
ENSANAG00000036716	RC3H1	100	88.606	ENSPSIG00000016181	RC3H1	100	88.782	Pelodiscus_sinensis
ENSANAG00000036716	RC3H1	100	93.998	ENSPEMG00000011966	Rc3h1	100	93.557	Peromyscus_maniculatus_bairdii
ENSANAG00000036716	RC3H1	70	94.304	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSANAG00000036716	RC3H1	100	95.499	ENSPPYG00000000490	RC3H1	98	97.990	Pongo_abelii
ENSANAG00000036716	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSANAG00000036716	RC3H1	83	96.795	ENSPCOG00000021795	RC3H1	96	96.795	Propithecus_coquereli
ENSANAG00000036716	RC3H1	100	87.820	ENSPVAG00000007593	RC3H1	100	87.732	Pteropus_vampyrus
ENSANAG00000036716	RC3H1	97	61.538	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSANAG00000036716	RC3H1	100	99.030	ENSRBIG00000037743	RC3H1	100	99.030	Rhinopithecus_bieti
ENSANAG00000036716	RC3H1	100	98.941	ENSRROG00000036546	RC3H1	100	98.941	Rhinopithecus_roxellana
ENSANAG00000036716	RC3H1	93	90.057	ENSSBOG00000010664	RC3H1	100	93.188	Saimiri_boliviensis_boliviensis
ENSANAG00000036716	RC3H1	100	91.101	ENSSHAG00000007589	RC3H1	100	91.189	Sarcophilus_harrisii
ENSANAG00000036716	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSANAG00000036716	RC3H1	100	84.238	ENSSPUG00000018472	RC3H1	100	83.699	Sphenodon_punctatus
ENSANAG00000036716	RC3H1	100	97.440	ENSSSCG00000015498	RC3H1	100	97.440	Sus_scrofa
ENSANAG00000036716	RC3H1	100	87.544	ENSTGUG00000004090	RC3H1	100	87.456	Taeniopygia_guttata
ENSANAG00000036716	RC3H1	93	91.781	ENSTBEG00000005015	RC3H1	93	91.096	Tupaia_belangeri
ENSANAG00000036716	RC3H1	100	96.740	ENSTTRG00000008572	RC3H1	100	96.740	Tursiops_truncatus
ENSANAG00000036716	RC3H1	100	96.558	ENSUAMG00000019525	RC3H1	100	96.558	Ursus_americanus
ENSANAG00000036716	RC3H1	100	97.090	ENSUMAG00000020087	RC3H1	100	97.090	Ursus_maritimus
ENSANAG00000036716	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSANAG00000036716	RC3H1	100	96.922	ENSVVUG00000014201	RC3H1	100	96.922	Vulpes_vulpes
ENSANAG00000036716	RC3H1	100	78.677	ENSXETG00000020030	rc3h1	100	78.223	Xenopus_tropicalis