EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSANAG00000037494 (Gene tree)
Gene ID: 105713043
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Plus strand
Length: 60463 bases
Position: chrKZ208815.1:13711804-13772266
Accession: 105713043
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000040303	RRM_1	PF00076.22	3.8e-09	1	1
ENSANAP00000040298	RRM_1	PF00076.22	4.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000058412	SCAF4-202	3402	-	ENSANAP00000040303	1133 (aa)	-	A0A2K5F4B0
ENSANAT00000058407	SCAF4-201	3495	XM_012446525	ENSANAP00000040298	1148 (aa)	XP_012301948	A0A2K5F4A5

Gene Model

Click here to download ENSANAG00000037494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000037494's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000037494	SCAF4	100	98.433	ENSG00000156304	SCAF4	100	98.433	Homo_sapiens
ENSANAG00000037494	SCAF4	79	53.789	ENSAPOG00000002946	scaf4a	55	57.251	Acanthochromis_polyacanthus
ENSANAG00000037494	SCAF4	73	93.389	ENSAMEG00000014987	SCAF4	96	93.389	Ailuropoda_melanoleuca
ENSANAG00000037494	SCAF4	99	75.347	ENSAPLG00000002509	SCAF4	59	83.461	Anas_platyrhynchos
ENSANAG00000037494	SCAF4	96	69.231	ENSACAG00000002569	SCAF4	52	84.146	Anolis_carolinensis
ENSANAG00000037494	SCAF4	93	49.643	ENSAMXG00000008585	scaf4a	60	62.952	Astyanax_mexicanus
ENSANAG00000037494	SCAF4	100	92.522	ENSBTAG00000018855	SCAF4	100	91.739	Bos_taurus
ENSANAG00000037494	SCAF4	100	99.130	ENSCJAG00000008993	SCAF4	100	99.130	Callithrix_jacchus
ENSANAG00000037494	SCAF4	99	92.976	ENSCAFG00000008863	SCAF4	99	92.888	Canis_familiaris
ENSANAG00000037494	SCAF4	99	90.741	ENSCAFG00020026019	SCAF4	100	92.118	Canis_lupus_dingo
ENSANAG00000037494	SCAF4	100	91.508	ENSCHIG00000008385	SCAF4	100	91.594	Capra_hircus
ENSANAG00000037494	SCAF4	91	96.595	ENSTSYG00000011344	SCAF4	99	96.595	Carlito_syrichta
ENSANAG00000037494	SCAF4	100	89.310	ENSCPOG00000012443	SCAF4	100	89.655	Cavia_porcellus
ENSANAG00000037494	SCAF4	100	99.042	ENSCCAG00000033727	SCAF4	100	99.042	Cebus_capucinus
ENSANAG00000037494	SCAF4	100	97.405	ENSCATG00000030379	SCAF4	100	97.405	Cercocebus_atys
ENSANAG00000037494	SCAF4	99	90.625	ENSCLAG00000006298	SCAF4	100	91.580	Chinchilla_lanigera
ENSANAG00000037494	SCAF4	100	97.915	ENSCSAG00000009438	SCAF4	100	97.915	Chlorocebus_sabaeus
ENSANAG00000037494	SCAF4	100	98.084	ENSCANG00000029847	SCAF4	100	98.084	Colobus_angolensis_palliatus
ENSANAG00000037494	SCAF4	99	83.113	ENSCGRG00001020821	Scaf4	100	82.285	Cricetulus_griseus_chok1gshd
ENSANAG00000037494	SCAF4	99	82.890	ENSCGRG00000014360	Scaf4	99	85.560	Cricetulus_griseus_crigri
ENSANAG00000037494	SCAF4	58	56.164	ENSCSEG00000012808	-	61	60.500	Cynoglossus_semilaevis
ENSANAG00000037494	SCAF4	100	90.157	ENSDNOG00000019014	SCAF4	94	89.808	Dasypus_novemcinctus
ENSANAG00000037494	SCAF4	92	97.436	ENSETEG00000000583	SCAF4	94	97.436	Echinops_telfairi
ENSANAG00000037494	SCAF4	100	93.902	ENSEASG00005007756	SCAF4	100	93.641	Equus_asinus_asinus
ENSANAG00000037494	SCAF4	100	93.728	ENSECAG00000014248	SCAF4	100	93.641	Equus_caballus
ENSANAG00000037494	SCAF4	58	52.703	ENSELUG00000002779	SCAF8	61	68.116	Esox_lucius
ENSANAG00000037494	SCAF4	100	92.281	ENSFCAG00000002228	SCAF4	100	92.368	Felis_catus
ENSANAG00000037494	SCAF4	99	89.147	ENSFDAG00000017780	SCAF4	100	89.492	Fukomys_damarensis
ENSANAG00000037494	SCAF4	100	76.384	ENSGALG00000033965	SCAF4	59	83.689	Gallus_gallus
ENSANAG00000037494	SCAF4	70	55.270	ENSGACG00000020580	scaf4a	54	70.122	Gasterosteus_aculeatus
ENSANAG00000037494	SCAF4	91	96.143	ENSGGOG00000015557	SCAF4	100	99.543	Gorilla_gorilla
ENSANAG00000037494	SCAF4	100	90.706	ENSHGLG00000010582	SCAF4	100	91.394	Heterocephalus_glaber_female
ENSANAG00000037494	SCAF4	99	90.592	ENSHGLG00100009441	SCAF4	100	91.289	Heterocephalus_glaber_male
ENSANAG00000037494	SCAF4	69	49.770	ENSIPUG00000011285	scaf4	63	63.213	Ictalurus_punctatus
ENSANAG00000037494	SCAF4	99	87.378	ENSSTOG00000004450	SCAF4	100	87.822	Ictidomys_tridecemlineatus
ENSANAG00000037494	SCAF4	99	89.474	ENSJJAG00000019447	Scaf4	99	89.561	Jaculus_jaculus
ENSANAG00000037494	SCAF4	98	60.210	ENSLACG00000013913	SCAF4	59	69.749	Latimeria_chalumnae
ENSANAG00000037494	SCAF4	95	57.143	ENSLOCG00000009162	scaf4a	59	67.804	Lepisosteus_oculatus
ENSANAG00000037494	SCAF4	99	91.723	ENSLAFG00000010710	SCAF4	100	91.339	Loxodonta_africana
ENSANAG00000037494	SCAF4	100	97.922	ENSMFAG00000037668	SCAF4	100	97.922	Macaca_fascicularis
ENSANAG00000037494	SCAF4	100	97.835	ENSMMUG00000001712	SCAF4	100	97.835	Macaca_mulatta
ENSANAG00000037494	SCAF4	100	97.751	ENSMNEG00000032966	SCAF4	100	97.751	Macaca_nemestrina
ENSANAG00000037494	SCAF4	99	97.988	ENSMLEG00000039674	SCAF4	100	97.988	Mandrillus_leucophaeus
ENSANAG00000037494	SCAF4	99	76.128	ENSMGAG00000014515	SCAF4	59	83.617	Meleagris_gallopavo
ENSANAG00000037494	SCAF4	99	88.468	ENSMAUG00000013307	Scaf4	100	88.292	Mesocricetus_auratus
ENSANAG00000037494	SCAF4	100	96.777	ENSMICG00000005256	SCAF4	100	96.777	Microcebus_murinus
ENSANAG00000037494	SCAF4	100	85.541	ENSMOCG00000012087	Scaf4	95	91.192	Microtus_ochrogaster
ENSANAG00000037494	SCAF4	100	84.535	ENSMODG00000021040	SCAF4	100	83.579	Monodelphis_domestica
ENSANAG00000037494	SCAF4	100	83.510	MGP_CAROLIEiJ_G0020944	Scaf4	95	90.116	Mus_caroli
ENSANAG00000037494	SCAF4	100	83.565	ENSMUSG00000022983	Scaf4	95	89.575	Mus_musculus
ENSANAG00000037494	SCAF4	100	82.549	MGP_PahariEiJ_G0016649	Scaf4	95	87.913	Mus_pahari
ENSANAG00000037494	SCAF4	100	84.236	MGP_SPRETEiJ_G0021850	Scaf4	100	85.971	Mus_spretus
ENSANAG00000037494	SCAF4	100	92.294	ENSMPUG00000001078	SCAF4	100	92.294	Mustela_putorius_furo
ENSANAG00000037494	SCAF4	99	77.243	ENSMLUG00000011472	SCAF4	99	77.527	Myotis_lucifugus
ENSANAG00000037494	SCAF4	99	90.630	ENSNGAG00000005214	Scaf4	99	90.734	Nannospalax_galili
ENSANAG00000037494	SCAF4	100	98.261	ENSNLEG00000003569	SCAF4	100	98.261	Nomascus_leucogenys
ENSANAG00000037494	SCAF4	85	89.130	ENSOPRG00000007016	SCAF4	77	89.130	Ochotona_princeps
ENSANAG00000037494	SCAF4	100	88.728	ENSODEG00000002718	SCAF4	100	88.813	Octodon_degus
ENSANAG00000037494	SCAF4	100	89.014	ENSOCUG00000008336	SCAF4	100	88.841	Oryctolagus_cuniculus
ENSANAG00000037494	SCAF4	52	57.480	ENSORLG00000003420	scaf4b	67	58.650	Oryzias_latipes
ENSANAG00000037494	SCAF4	99	88.786	ENSOGAG00000014653	SCAF4	94	95.214	Otolemur_garnettii
ENSANAG00000037494	SCAF4	99	90.846	ENSOARG00000013894	SCAF4	99	90.625	Ovis_aries
ENSANAG00000037494	SCAF4	100	98.433	ENSPPAG00000028535	SCAF4	100	98.433	Pan_paniscus
ENSANAG00000037494	SCAF4	99	92.550	ENSPPRG00000000635	SCAF4	100	92.726	Panthera_pardus
ENSANAG00000037494	SCAF4	99	90.598	ENSPTIG00000021578	SCAF4	99	89.543	Panthera_tigris_altaica
ENSANAG00000037494	SCAF4	100	98.433	ENSPTRG00000013848	SCAF4	100	98.433	Pan_troglodytes
ENSANAG00000037494	SCAF4	100	97.922	ENSPANG00000017332	SCAF4	100	97.922	Papio_anubis
ENSANAG00000037494	SCAF4	64	64.380	ENSPKIG00000022408	scaf4a	90	66.816	Paramormyrops_kingsleyae
ENSANAG00000037494	SCAF4	99	76.728	ENSPSIG00000014242	SCAF4	57	84.520	Pelodiscus_sinensis
ENSANAG00000037494	SCAF4	61	87.374	ENSPCIG00000028183	SCAF4	91	81.810	Phascolarctos_cinereus
ENSANAG00000037494	SCAF4	100	98.435	ENSPPYG00000011355	SCAF4	100	98.435	Pongo_abelii
ENSANAG00000037494	SCAF4	100	95.482	ENSPCOG00000018710	SCAF4	100	95.917	Propithecus_coquereli
ENSANAG00000037494	SCAF4	100	92.160	ENSPVAG00000005220	SCAF4	100	92.247	Pteropus_vampyrus
ENSANAG00000037494	SCAF4	76	57.593	ENSPNAG00000016892	scaf4a	60	63.473	Pygocentrus_nattereri
ENSANAG00000037494	SCAF4	98	86.667	ENSRNOG00000002104	Scaf4	95	86.154	Rattus_norvegicus
ENSANAG00000037494	SCAF4	99	95.526	ENSRBIG00000040007	SCAF4	99	95.526	Rhinopithecus_bieti
ENSANAG00000037494	SCAF4	100	98.084	ENSRROG00000029488	SCAF4	100	98.084	Rhinopithecus_roxellana
ENSANAG00000037494	SCAF4	100	83.899	ENSSHAG00000001581	SCAF4	100	82.942	Sarcophilus_harrisii
ENSANAG00000037494	SCAF4	89	47.697	ENSSFOG00015006338	scaf4a	54	58.041	Scleropages_formosus
ENSANAG00000037494	SCAF4	65	57.042	ENSSMAG00000003738	scaf4b	54	71.519	Scophthalmus_maximus
ENSANAG00000037494	SCAF4	57	60.932	ENSSDUG00000012380	scaf4b	54	70.886	Seriola_dumerili
ENSANAG00000037494	SCAF4	57	60.932	ENSSLDG00000023152	-	54	70.886	Seriola_lalandi_dorsalis
ENSANAG00000037494	SCAF4	100	88.658	ENSSARG00000009994	SCAF4	100	89.177	Sorex_araneus
ENSANAG00000037494	SCAF4	100	90.078	ENSSSCG00000021023	SCAF4	100	90.164	Sus_scrofa
ENSANAG00000037494	SCAF4	74	72.462	ENSTGUG00000013464	SCAF4	57	86.047	Taeniopygia_guttata
ENSANAG00000037494	SCAF4	51	58.681	ENSTRUG00000009536	-	65	57.604	Takifugu_rubripes
ENSANAG00000037494	SCAF4	99	92.091	ENSTTRG00000010963	SCAF4	100	91.652	Tursiops_truncatus
ENSANAG00000037494	SCAF4	100	90.679	ENSUAMG00000008860	SCAF4	100	90.592	Ursus_americanus
ENSANAG00000037494	SCAF4	99	90.741	ENSUMAG00000016962	SCAF4	100	91.182	Ursus_maritimus
ENSANAG00000037494	SCAF4	99	94.009	ENSVVUG00000002953	SCAF4	100	94.009	Vulpes_vulpes
ENSANAG00000037494	SCAF4	99	56.333	ENSXETG00000007351	scaf4	91	66.619	Xenopus_tropicalis