EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSANAG00000037548 (Gene tree)
Gene ID: 105719123
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Aotus_nancymaae
Status: putative
Strand: Minus strand
Length: 194679 bases
Position: chrKZ204317.1:20828201-21022879
Accession: 105719123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSANAP00000040497	ResIII	PF04851.15	2e-08	1	1
ENSANAP00000040479	ResIII	PF04851.15	1e-07	1	1
ENSANAP00000040488	ResIII	PF04851.15	1e-07	1	1
ENSANAP00000040487	ResIII	PF04851.15	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSANAT00000058588	CHD6-201	8426	XM_012455000	ENSANAP00000040479	2716 (aa)	XP_012310423	A0A2K5F4Z8
ENSANAT00000058596	CHD6-202	8157	-	ENSANAP00000040487	2718 (aa)	-	A0A2K5F4V1
ENSANAT00000058597	CHD6-203	8130	-	ENSANAP00000040488	2709 (aa)	-	A0A2K5F4T8
ENSANAT00000058606	CHD6-204	1641	-	ENSANAP00000040497	546 (aa)	-	A0A2K5F4W0
ENSANAT00000058607	CHD6-205	1119	-	ENSANAP00000040498	372 (aa)	-	A0A2K5F4U8

Gene Model

Click here to download ENSANAG00000037548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSANAG00000037548's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSANAG00000037548	CHD6	88	42.885	ENSANAG00000034323	CHD3	50	34.728
ENSANAG00000037548	CHD6	72	41.162	ENSANAG00000019345	SMARCA5	52	42.259
ENSANAG00000037548	CHD6	93	41.455	ENSANAG00000035685	-	50	35.976
ENSANAG00000037548	CHD6	99	72.894	ENSANAG00000035300	CHD7	71	65.322
ENSANAG00000037548	CHD6	77	31.078	ENSANAG00000020488	SMARCAD1	55	35.907
ENSANAG00000037548	CHD6	99	72.344	ENSANAG00000037714	CHD8	70	62.842
ENSANAG00000037548	CHD6	75	38.849	ENSANAG00000023098	SMARCA1	50	40.497
ENSANAG00000037548	CHD6	68	41.053	ENSANAG00000024347	CHD1L	55	42.293
ENSANAG00000037548	CHD6	85	39.596	ENSANAG00000024017	-	52	35.404
ENSANAG00000037548	CHD6	99	72.110	ENSANAG00000015630	CHD9	91	46.179
ENSANAG00000037548	CHD6	68	34.452	ENSANAG00000034765	-	83	37.789

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSANAG00000037548	CHD6	100	96.944	ENSG00000124177	CHD6	100	99.329	Homo_sapiens
ENSANAG00000037548	CHD6	99	82.418	ENSAPOG00000013736	chd6	67	71.945	Acanthochromis_polyacanthus
ENSANAG00000037548	CHD6	99	93.394	ENSAMEG00000009496	CHD6	100	91.363	Ailuropoda_melanoleuca
ENSANAG00000037548	CHD6	99	82.051	ENSATEG00000005608	chd6	62	77.257	Anabas_testudineus
ENSANAG00000037548	CHD6	99	89.541	ENSAPLG00000015592	CHD6	99	72.275	Anas_platyrhynchos
ENSANAG00000037548	CHD6	94	86.408	ENSAMXG00000009576	chd6	77	69.441	Astyanax_mexicanus
ENSANAG00000037548	CHD6	99	93.211	ENSBTAG00000005733	CHD6	100	88.032	Bos_taurus
ENSANAG00000037548	CHD6	100	99.817	ENSCJAG00000017920	CHD6	100	99.817	Callithrix_jacchus
ENSANAG00000037548	CHD6	99	93.394	ENSCAFG00000009236	CHD6	100	91.106	Canis_familiaris
ENSANAG00000037548	CHD6	100	97.985	ENSCAFG00020012906	CHD6	100	97.985	Canis_lupus_dingo
ENSANAG00000037548	CHD6	99	93.578	ENSCHIG00000017606	CHD6	100	88.106	Capra_hircus
ENSANAG00000037548	CHD6	84	92.190	ENSTSYG00000014635	CHD6	100	92.190	Carlito_syrichta
ENSANAG00000037548	CHD6	99	93.394	ENSCPOG00000015641	CHD6	100	91.106	Cavia_porcellus
ENSANAG00000037548	CHD6	100	100.000	ENSCCAG00000036828	CHD6	100	100.000	Cebus_capucinus
ENSANAG00000037548	CHD6	100	100.000	ENSCATG00000039248	CHD6	100	100.000	Cercocebus_atys
ENSANAG00000037548	CHD6	99	93.211	ENSCLAG00000013743	CHD6	100	90.686	Chinchilla_lanigera
ENSANAG00000037548	CHD6	100	96.797	ENSCSAG00000013997	CHD6	100	96.797	Chlorocebus_sabaeus
ENSANAG00000037548	CHD6	99	87.156	ENSCHOG00000012647	CHD6	95	89.921	Choloepus_hoffmanni
ENSANAG00000037548	CHD6	99	89.358	ENSCPBG00000019382	CHD6	99	73.331	Chrysemys_picta_bellii
ENSANAG00000037548	CHD6	100	100.000	ENSCANG00000043435	CHD6	100	100.000	Colobus_angolensis_palliatus
ENSANAG00000037548	CHD6	99	91.376	ENSCGRG00001002694	Chd6	100	89.269	Cricetulus_griseus_chok1gshd
ENSANAG00000037548	CHD6	100	97.253	ENSCGRG00000006749	-	100	97.253	Cricetulus_griseus_crigri
ENSANAG00000037548	CHD6	91	88.956	ENSDARG00000017244	chd6	79	73.678	Danio_rerio
ENSANAG00000037548	CHD6	99	92.844	ENSDNOG00000004176	CHD6	99	90.269	Dasypus_novemcinctus
ENSANAG00000037548	CHD6	100	98.352	ENSEASG00005023433	CHD6	100	98.352	Equus_asinus_asinus
ENSANAG00000037548	CHD6	99	93.394	ENSECAG00000011761	CHD6	100	92.056	Equus_caballus
ENSANAG00000037548	CHD6	94	85.243	ENSELUG00000012309	chd6	92	79.939	Esox_lucius
ENSANAG00000037548	CHD6	99	93.394	ENSFCAG00000003572	CHD6	100	91.547	Felis_catus
ENSANAG00000037548	CHD6	99	88.991	ENSFALG00000012563	CHD6	98	71.114	Ficedula_albicollis
ENSANAG00000037548	CHD6	99	92.661	ENSFDAG00000013791	CHD6	99	91.550	Fukomys_damarensis
ENSANAG00000037548	CHD6	89	83.197	ENSGMOG00000011715	chd6	85	69.712	Gadus_morhua
ENSANAG00000037548	CHD6	94	80.233	ENSGACG00000000037	chd6	92	64.104	Gasterosteus_aculeatus
ENSANAG00000037548	CHD6	61	94.012	ENSGAGG00000007475	-	79	94.169	Gopherus_agassizii
ENSANAG00000037548	CHD6	100	100.000	ENSGGOG00000013123	CHD6	100	100.000	Gorilla_gorilla
ENSANAG00000037548	CHD6	99	81.319	ENSHBUG00000014701	chd6	62	76.738	Haplochromis_burtoni
ENSANAG00000037548	CHD6	99	92.844	ENSHGLG00000004548	CHD6	100	91.550	Heterocephalus_glaber_female
ENSANAG00000037548	CHD6	99	92.844	ENSHGLG00100006401	CHD6	100	91.550	Heterocephalus_glaber_male
ENSANAG00000037548	CHD6	94	85.631	ENSIPUG00000003692	chd6	74	76.319	Ictalurus_punctatus
ENSANAG00000037548	CHD6	99	93.394	ENSSTOG00000013382	CHD6	100	92.062	Ictidomys_tridecemlineatus
ENSANAG00000037548	CHD6	99	84.404	ENSLACG00000010881	CHD6	84	77.238	Latimeria_chalumnae
ENSANAG00000037548	CHD6	94	86.990	ENSLOCG00000007386	chd6	84	75.543	Lepisosteus_oculatus
ENSANAG00000037548	CHD6	99	93.028	ENSLAFG00000012144	CHD6	100	91.550	Loxodonta_africana
ENSANAG00000037548	CHD6	100	100.000	ENSMFAG00000032830	CHD6	100	100.000	Macaca_fascicularis
ENSANAG00000037548	CHD6	100	100.000	ENSMMUG00000020458	CHD6	100	100.000	Macaca_mulatta
ENSANAG00000037548	CHD6	100	100.000	ENSMNEG00000040847	CHD6	100	100.000	Macaca_nemestrina
ENSANAG00000037548	CHD6	100	100.000	ENSMLEG00000031965	CHD6	100	100.000	Mandrillus_leucophaeus
ENSANAG00000037548	CHD6	99	81.685	ENSMAMG00000013111	chd6	62	77.172	Mastacembelus_armatus
ENSANAG00000037548	CHD6	99	89.011	ENSMGAG00000001121	CHD6	99	71.941	Meleagris_gallopavo
ENSANAG00000037548	CHD6	100	99.084	ENSMICG00000016641	CHD6	100	99.084	Microcebus_murinus
ENSANAG00000037548	CHD6	99	91.560	ENSMOCG00000014004	-	97	94.331	Microtus_ochrogaster
ENSANAG00000037548	CHD6	99	91.743	ENSMODG00000000720	-	99	80.933	Monodelphis_domestica
ENSANAG00000037548	CHD6	99	91.009	MGP_CAROLIEiJ_G0024604	Chd6	100	94.599	Mus_caroli
ENSANAG00000037548	CHD6	99	91.009	ENSMUSG00000057133	Chd6	100	94.515	Mus_musculus
ENSANAG00000037548	CHD6	99	91.193	MGP_PahariEiJ_G0026048	Chd6	100	94.937	Mus_pahari
ENSANAG00000037548	CHD6	99	91.009	MGP_SPRETEiJ_G0025526	Chd6	100	94.599	Mus_spretus
ENSANAG00000037548	CHD6	99	93.394	ENSMPUG00000017695	CHD6	100	89.846	Mustela_putorius_furo
ENSANAG00000037548	CHD6	99	93.028	ENSMLUG00000016247	CHD6	100	90.628	Myotis_lucifugus
ENSANAG00000037548	CHD6	99	81.550	ENSNBRG00000013839	chd6	79	72.982	Neolamprologus_brichardi
ENSANAG00000037548	CHD6	100	94.960	ENSNLEG00000006496	CHD6	99	95.381	Nomascus_leucogenys
ENSANAG00000037548	CHD6	100	87.321	ENSOPRG00000013376	-	100	87.321	Ochotona_princeps
ENSANAG00000037548	CHD6	99	81.502	ENSONIG00000000393	chd6	85	73.592	Oreochromis_niloticus
ENSANAG00000037548	CHD6	99	89.541	ENSOANG00000014347	CHD6	99	70.315	Ornithorhynchus_anatinus
ENSANAG00000037548	CHD6	99	93.578	ENSOCUG00000012394	CHD6	100	89.665	Oryctolagus_cuniculus
ENSANAG00000037548	CHD6	96	84.571	ENSORLG00020021891	chd6	99	84.571	Oryzias_latipes_hni
ENSANAG00000037548	CHD6	99	93.211	ENSOGAG00000002427	CHD6	100	91.421	Otolemur_garnettii
ENSANAG00000037548	CHD6	99	93.578	ENSOARG00000002597	CHD6	100	85.893	Ovis_aries
ENSANAG00000037548	CHD6	99	93.394	ENSPPRG00000014756	CHD6	100	91.621	Panthera_pardus
ENSANAG00000037548	CHD6	99	93.394	ENSPTIG00000011094	CHD6	100	91.510	Panthera_tigris_altaica
ENSANAG00000037548	CHD6	100	100.000	ENSPTRG00000013504	CHD6	99	100.000	Pan_troglodytes
ENSANAG00000037548	CHD6	100	99.817	ENSPANG00000025554	CHD6	100	99.817	Papio_anubis
ENSANAG00000037548	CHD6	94	86.990	ENSPKIG00000005578	chd6	79	72.479	Paramormyrops_kingsleyae
ENSANAG00000037548	CHD6	99	82.202	ENSPMGG00000014877	chd6	88	76.879	Periophthalmus_magnuspinnatus
ENSANAG00000037548	CHD6	100	97.253	ENSPEMG00000014672	-	100	97.253	Peromyscus_maniculatus_bairdii
ENSANAG00000037548	CHD6	99	91.743	ENSPCIG00000028037	CHD6	100	80.528	Phascolarctos_cinereus
ENSANAG00000037548	CHD6	99	81.319	ENSPLAG00000003128	chd6	68	72.524	Poecilia_latipinna
ENSANAG00000037548	CHD6	99	81.319	ENSPREG00000022653	chd6	99	86.447	Poecilia_reticulata
ENSANAG00000037548	CHD6	100	97.056	ENSPPYG00000011016	CHD6	100	97.056	Pongo_abelii
ENSANAG00000037548	CHD6	100	99.634	ENSPCOG00000001089	CHD6	100	99.634	Propithecus_coquereli
ENSANAG00000037548	CHD6	99	81.319	ENSPNYG00000022516	chd6	78	74.236	Pundamilia_nyererei
ENSANAG00000037548	CHD6	94	86.990	ENSPNAG00000012825	chd6	79	70.705	Pygocentrus_nattereri
ENSANAG00000037548	CHD6	99	90.826	ENSRNOG00000016744	Chd6	100	87.100	Rattus_norvegicus
ENSANAG00000037548	CHD6	100	100.000	ENSSBOG00000022089	CHD6	99	100.000	Saimiri_boliviensis_boliviensis
ENSANAG00000037548	CHD6	99	91.560	ENSSHAG00000017072	CHD6	100	79.993	Sarcophilus_harrisii
ENSANAG00000037548	CHD6	94	86.990	ENSSFOG00015012920	chd6	81	73.199	Scleropages_formosus
ENSANAG00000037548	CHD6	84	99.782	ENSSARG00000002615	-	61	99.342	Sorex_araneus
ENSANAG00000037548	CHD6	99	93.394	ENSSSCG00000007360	CHD6	100	90.815	Sus_scrofa
ENSANAG00000037548	CHD6	99	91.376	ENSTTRG00000013438	CHD6	100	87.592	Tursiops_truncatus
ENSANAG00000037548	CHD6	100	97.985	ENSUAMG00000024036	CHD6	100	97.985	Ursus_americanus
ENSANAG00000037548	CHD6	100	97.985	ENSUMAG00000002017	CHD6	100	97.985	Ursus_maritimus
ENSANAG00000037548	CHD6	98	88.037	ENSVPAG00000007941	CHD6	93	89.596	Vicugna_pacos
ENSANAG00000037548	CHD6	99	93.394	ENSVVUG00000029164	CHD6	100	91.253	Vulpes_vulpes
ENSANAG00000037548	CHD6	99	64.037	ENSXETG00000021445	chd6	62	71.197	Xenopus_tropicalis