EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000000337 (Gene tree)
Gene ID: 111577759
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 3533 bases
Position: chrNXFZ01003261.1:119758-123290
Accession: 111577759
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000021740	RRM_1	PF00076.22	1.1e-33	1	2
ENSAOCP00000021740	RRM_1	PF00076.22	1.1e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000009744	-	1002	XM_023284185	ENSAOCP00000021740	248 (aa)	XP_023139953	UPI000C30A7DE

Gene Model

Click here to download ENSAOCG00000000337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000000337's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000000337	-	68	44.118	ENSAOCG00000004309	-	52	38.947
ENSAOCG00000000337	-	80	88.442	ENSAOCG00000010671	-	83	88.442
ENSAOCG00000000337	-	75	68.649	ENSAOCG00000002992	srsf9	73	68.108
ENSAOCG00000000337	-	69	42.045	ENSAOCG00000014967	srsf5a	58	46.023
ENSAOCG00000000337	-	67	45.509	ENSAOCG00000005997	srsf4	94	43.678
ENSAOCG00000000337	-	67	49.711	ENSAOCG00000005719	srsf5b	58	42.328

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000000337	-	100	86.508	ENSG00000136450	SRSF1	100	90.769	Homo_sapiens
ENSAOCG00000000337	-	80	87.940	ENSAPOG00000002748	-	78	87.940	Acanthochromis_polyacanthus
ENSAOCG00000000337	-	100	99.597	ENSAPOG00000008542	-	99	99.597	Acanthochromis_polyacanthus
ENSAOCG00000000337	-	82	88.177	ENSAMEG00000002635	SRSF1	79	86.700	Ailuropoda_melanoleuca
ENSAOCG00000000337	-	80	87.940	ENSACIG00000008091	srsf1a	83	87.940	Amphilophus_citrinellus
ENSAOCG00000000337	-	80	88.442	ENSAPEG00000009915	-	83	88.442	Amphiprion_percula
ENSAOCG00000000337	-	100	99.597	ENSAPEG00000023352	-	98	99.597	Amphiprion_percula
ENSAOCG00000000337	-	95	90.638	ENSATEG00000021567	-	82	91.133	Anabas_testudineus
ENSAOCG00000000337	-	80	88.442	ENSATEG00000022403	-	77	88.442	Anabas_testudineus
ENSAOCG00000000337	-	82	87.685	ENSACAG00000005542	-	79	89.163	Anolis_carolinensis
ENSAOCG00000000337	-	100	86.508	ENSANAG00000020583	-	99	90.278	Aotus_nancymaae
ENSAOCG00000000337	-	56	78.710	ENSAMXG00000024373	-	72	75.309	Astyanax_mexicanus
ENSAOCG00000000337	-	95	87.500	ENSAMXG00000035996	srsf1a	79	93.000	Astyanax_mexicanus
ENSAOCG00000000337	-	100	86.508	ENSBTAG00000014766	SRSF1	79	91.133	Bos_taurus
ENSAOCG00000000337	-	100	86.508	ENSCJAG00000041713	-	99	90.278	Callithrix_jacchus
ENSAOCG00000000337	-	81	83.168	ENSCJAG00000008111	-	88	84.236	Callithrix_jacchus
ENSAOCG00000000337	-	100	86.508	ENSCAFG00000017430	SRSF1	78	91.133	Canis_familiaris
ENSAOCG00000000337	-	100	86.508	ENSCAFG00020025632	-	78	91.133	Canis_lupus_dingo
ENSAOCG00000000337	-	82	89.655	ENSCHIG00000010787	SRSF1	79	91.133	Capra_hircus
ENSAOCG00000000337	-	100	86.508	ENSTSYG00000013899	-	99	90.278	Carlito_syrichta
ENSAOCG00000000337	-	100	86.508	ENSCPOG00000032681	-	79	91.133	Cavia_porcellus
ENSAOCG00000000337	-	100	86.508	ENSCCAG00000029484	-	99	90.278	Cebus_capucinus
ENSAOCG00000000337	-	100	86.508	ENSCATG00000042294	-	99	90.278	Cercocebus_atys
ENSAOCG00000000337	-	100	86.508	ENSCLAG00000014707	-	79	91.133	Chinchilla_lanigera
ENSAOCG00000000337	-	100	85.714	ENSCSAG00000005642	-	78	90.148	Chlorocebus_sabaeus
ENSAOCG00000000337	-	82	89.655	ENSCHOG00000001899	SRSF1	79	91.133	Choloepus_hoffmanni
ENSAOCG00000000337	-	100	85.317	ENSCPBG00000009851	-	79	89.655	Chrysemys_picta_bellii
ENSAOCG00000000337	-	100	86.508	ENSCANG00000029726	-	99	90.278	Colobus_angolensis_palliatus
ENSAOCG00000000337	-	100	86.508	ENSCGRG00001000670	Srsf1	78	91.133	Cricetulus_griseus_chok1gshd
ENSAOCG00000000337	-	100	86.508	ENSCGRG00000005590	Srsf1	79	91.133	Cricetulus_griseus_crigri
ENSAOCG00000000337	-	81	89.623	ENSCSEG00000009973	-	81	89.623	Cynoglossus_semilaevis
ENSAOCG00000000337	-	80	90.452	ENSCSEG00000014272	-	78	89.950	Cynoglossus_semilaevis
ENSAOCG00000000337	-	80	88.442	ENSCVAG00000018617	-	78	88.442	Cyprinodon_variegatus
ENSAOCG00000000337	-	80	92.965	ENSCVAG00000005458	-	91	91.979	Cyprinodon_variegatus
ENSAOCG00000000337	-	81	88.500	ENSDARG00000017843	srsf1b	79	90.000	Danio_rerio
ENSAOCG00000000337	-	81	90.686	ENSDARG00000057691	srsf1a	99	91.623	Danio_rerio
ENSAOCG00000000337	-	100	86.508	ENSDNOG00000011737	-	78	91.133	Dasypus_novemcinctus
ENSAOCG00000000337	-	100	86.508	ENSDORG00000015082	Srsf1	79	91.133	Dipodomys_ordii
ENSAOCG00000000337	-	77	88.421	ENSETEG00000005349	-	63	88.421	Echinops_telfairi
ENSAOCG00000000337	-	100	86.508	ENSEASG00005002922	-	78	91.133	Equus_asinus_asinus
ENSAOCG00000000337	-	82	89.655	ENSECAG00000016654	SRSF1	79	91.133	Equus_caballus
ENSAOCG00000000337	-	77	89.474	ENSEEUG00000009255	-	63	89.474	Erinaceus_europaeus
ENSAOCG00000000337	-	81	87.000	ENSELUG00000021646	srsf1a	77	86.500	Esox_lucius
ENSAOCG00000000337	-	100	86.508	ENSFCAG00000002250	-	92	89.474	Felis_catus
ENSAOCG00000000337	-	75	91.228	ENSFALG00000005062	-	78	70.443	Ficedula_albicollis
ENSAOCG00000000337	-	100	86.508	ENSFDAG00000010646	-	79	91.133	Fukomys_damarensis
ENSAOCG00000000337	-	80	88.442	ENSFHEG00000003174	srsf1a	83	87.940	Fundulus_heteroclitus
ENSAOCG00000000337	-	93	84.783	ENSGMOG00000014787	-	80	83.920	Gadus_morhua
ENSAOCG00000000337	-	82	88.177	ENSGALG00000005525	SRSF1	79	89.655	Gallus_gallus
ENSAOCG00000000337	-	82	86.700	ENSGACG00000020621	srsf1b	80	85.714	Gasterosteus_aculeatus
ENSAOCG00000000337	-	100	85.317	ENSGAGG00000022965	-	78	89.655	Gopherus_agassizii
ENSAOCG00000000337	-	100	86.508	ENSGGOG00000004386	SRSF1	99	90.278	Gorilla_gorilla
ENSAOCG00000000337	-	80	87.940	ENSHBUG00000016788	srsf1a	80	87.940	Haplochromis_burtoni
ENSAOCG00000000337	-	69	89.412	ENSHGLG00000000600	-	76	91.176	Heterocephalus_glaber_female
ENSAOCG00000000337	-	69	89.412	ENSHGLG00000000669	-	76	91.176	Heterocephalus_glaber_female
ENSAOCG00000000337	-	100	86.508	ENSHGLG00100016906	-	79	91.133	Heterocephalus_glaber_male
ENSAOCG00000000337	-	80	87.940	ENSHCOG00000018918	srsf1a	77	87.940	Hippocampus_comes
ENSAOCG00000000337	-	82	88.177	ENSIPUG00000008750	srsf1b	80	89.163	Ictalurus_punctatus
ENSAOCG00000000337	-	80	92.462	ENSIPUG00000017039	srsf1a	79	92.462	Ictalurus_punctatus
ENSAOCG00000000337	-	100	86.508	ENSSTOG00000000243	-	92	89.474	Ictidomys_tridecemlineatus
ENSAOCG00000000337	-	54	81.203	ENSJJAG00000014464	-	95	79.699	Jaculus_jaculus
ENSAOCG00000000337	-	100	86.508	ENSJJAG00000000102	-	79	91.133	Jaculus_jaculus
ENSAOCG00000000337	-	80	88.442	ENSKMAG00000019232	srsf1a	78	88.442	Kryptolebias_marmoratus
ENSAOCG00000000337	-	80	87.437	ENSLBEG00000020864	-	83	87.437	Labrus_bergylta
ENSAOCG00000000337	-	95	86.809	ENSLBEG00000015294	-	80	88.177	Labrus_bergylta
ENSAOCG00000000337	-	81	87.500	ENSLACG00000014160	srsf1a	73	87.500	Latimeria_chalumnae
ENSAOCG00000000337	-	82	88.177	ENSLOCG00000005994	srsf1a	79	89.163	Lepisosteus_oculatus
ENSAOCG00000000337	-	82	89.655	ENSLAFG00000025743	SRSF1	79	91.133	Loxodonta_africana
ENSAOCG00000000337	-	100	86.508	ENSMFAG00000040003	-	99	90.278	Macaca_fascicularis
ENSAOCG00000000337	-	100	86.508	ENSMMUG00000004725	SRSF1	99	90.278	Macaca_mulatta
ENSAOCG00000000337	-	100	83.730	ENSMMUG00000003260	-	95	87.129	Macaca_mulatta
ENSAOCG00000000337	-	100	86.508	ENSMNEG00000027680	-	99	90.278	Macaca_nemestrina
ENSAOCG00000000337	-	100	83.333	ENSMNEG00000015983	-	78	87.685	Macaca_nemestrina
ENSAOCG00000000337	-	82	89.655	ENSMLEG00000040509	SRSF1	79	91.133	Mandrillus_leucophaeus
ENSAOCG00000000337	-	100	82.540	ENSMLEG00000015243	-	77	84.729	Mandrillus_leucophaeus
ENSAOCG00000000337	-	82	92.118	ENSMAMG00000019691	-	81	92.118	Mastacembelus_armatus
ENSAOCG00000000337	-	80	88.442	ENSMAMG00000018454	-	78	88.442	Mastacembelus_armatus
ENSAOCG00000000337	-	82	90.148	ENSMAMG00000019687	-	80	91.626	Mastacembelus_armatus
ENSAOCG00000000337	-	100	86.508	ENSMAUG00000021845	Srsf1	79	91.133	Mesocricetus_auratus
ENSAOCG00000000337	-	100	86.508	ENSMICG00000013639	-	99	90.278	Microcebus_murinus
ENSAOCG00000000337	-	100	86.508	ENSMOCG00000001996	Srsf1	79	91.133	Microtus_ochrogaster
ENSAOCG00000000337	-	80	86.935	ENSMMOG00000014354	srsf1a	83	86.935	Mola_mola
ENSAOCG00000000337	-	77	91.053	ENSMODG00000014781	-	63	89.474	Monodelphis_domestica
ENSAOCG00000000337	-	80	87.940	ENSMALG00000017129	-	75	87.940	Monopterus_albus
ENSAOCG00000000337	-	85	75.714	ENSMALG00000007763	-	79	77.833	Monopterus_albus
ENSAOCG00000000337	-	100	86.508	MGP_CAROLIEiJ_G0016943	Srsf1	92	89.474	Mus_caroli
ENSAOCG00000000337	-	100	86.508	ENSMUSG00000018379	Srsf1	92	89.474	Mus_musculus
ENSAOCG00000000337	-	100	86.508	MGP_PahariEiJ_G0018074	Srsf1	75	98.734	Mus_pahari
ENSAOCG00000000337	-	100	86.508	MGP_SPRETEiJ_G0017790	Srsf1	92	89.474	Mus_spretus
ENSAOCG00000000337	-	82	89.655	ENSMPUG00000015369	SRSF1	79	91.133	Mustela_putorius_furo
ENSAOCG00000000337	-	84	83.254	ENSMLUG00000023995	-	79	84.236	Myotis_lucifugus
ENSAOCG00000000337	-	82	89.655	ENSMLUG00000011040	SRSF1	79	91.133	Myotis_lucifugus
ENSAOCG00000000337	-	82	89.655	ENSNGAG00000011395	Srsf1	79	91.133	Nannospalax_galili
ENSAOCG00000000337	-	100	81.452	ENSNBRG00000008041	srsf1b	80	81.773	Neolamprologus_brichardi
ENSAOCG00000000337	-	100	86.508	ENSNLEG00000008088	-	99	90.278	Nomascus_leucogenys
ENSAOCG00000000337	-	53	86.364	ENSMEUG00000002783	-	100	84.848	Notamacropus_eugenii
ENSAOCG00000000337	-	56	89.130	ENSOPRG00000001234	-	72	91.304	Ochotona_princeps
ENSAOCG00000000337	-	99	86.454	ENSODEG00000011481	-	79	90.640	Octodon_degus
ENSAOCG00000000337	-	80	87.940	ENSONIG00000013160	-	77	87.940	Oreochromis_niloticus
ENSAOCG00000000337	-	96	90.795	ENSONIG00000004860	-	81	91.133	Oreochromis_niloticus
ENSAOCG00000000337	-	97	67.339	ENSOCUG00000010894	-	77	68.627	Oryctolagus_cuniculus
ENSAOCG00000000337	-	80	88.442	ENSORLG00000004580	srsf1a	78	88.442	Oryzias_latipes
ENSAOCG00000000337	-	80	88.442	ENSORLG00020009456	srsf1a	83	88.442	Oryzias_latipes_hni
ENSAOCG00000000337	-	80	88.442	ENSORLG00015014384	srsf1a	83	88.442	Oryzias_latipes_hsok
ENSAOCG00000000337	-	73	86.813	ENSOMEG00000004106	srsf1a	71	86.813	Oryzias_melastigma
ENSAOCG00000000337	-	86	90.187	ENSOGAG00000025950	-	79	91.133	Otolemur_garnettii
ENSAOCG00000000337	-	82	85.222	ENSOARG00000008323	SRSF1	78	86.700	Ovis_aries
ENSAOCG00000000337	-	100	86.508	ENSPPAG00000043403	-	99	90.278	Pan_paniscus
ENSAOCG00000000337	-	100	86.508	ENSPPRG00000004238	-	92	89.474	Panthera_pardus
ENSAOCG00000000337	-	100	86.508	ENSPTRG00000049077	SRSF1	99	90.278	Pan_troglodytes
ENSAOCG00000000337	-	100	86.508	ENSPANG00000022305	-	99	90.278	Papio_anubis
ENSAOCG00000000337	-	100	68.000	ENSPANG00000030275	-	75	65.842	Papio_anubis
ENSAOCG00000000337	-	82	88.177	ENSPKIG00000012857	srsf1b	80	89.163	Paramormyrops_kingsleyae
ENSAOCG00000000337	-	81	87.000	ENSPKIG00000007204	srsf1a	83	87.940	Paramormyrops_kingsleyae
ENSAOCG00000000337	-	82	81.463	ENSPSIG00000009000	-	80	82.927	Pelodiscus_sinensis
ENSAOCG00000000337	-	80	88.442	ENSPMGG00000013112	-	79	90.955	Periophthalmus_magnuspinnatus
ENSAOCG00000000337	-	83	83.981	ENSPMGG00000005467	-	77	87.958	Periophthalmus_magnuspinnatus
ENSAOCG00000000337	-	100	86.508	ENSPEMG00000021416	Srsf1	79	91.133	Peromyscus_maniculatus_bairdii
ENSAOCG00000000337	-	82	90.640	ENSPCIG00000006076	-	80	91.133	Phascolarctos_cinereus
ENSAOCG00000000337	-	82	92.118	ENSPFOG00000018325	-	70	92.462	Poecilia_formosa
ENSAOCG00000000337	-	82	92.118	ENSPLAG00000008416	srsf1b	79	92.462	Poecilia_latipinna
ENSAOCG00000000337	-	52	83.721	ENSPMEG00000020607	-	98	83.721	Poecilia_mexicana
ENSAOCG00000000337	-	82	92.118	ENSPMEG00000002388	-	79	92.462	Poecilia_mexicana
ENSAOCG00000000337	-	52	83.721	ENSPMEG00000014312	-	98	83.721	Poecilia_mexicana
ENSAOCG00000000337	-	80	88.442	ENSPREG00000009667	srsf1a	78	88.442	Poecilia_reticulata
ENSAOCG00000000337	-	100	86.508	ENSPPYG00000008240	SRSF1	79	91.133	Pongo_abelii
ENSAOCG00000000337	-	82	89.655	ENSPCAG00000005199	SRSF1	79	91.133	Procavia_capensis
ENSAOCG00000000337	-	100	86.508	ENSPCOG00000023654	-	99	90.278	Propithecus_coquereli
ENSAOCG00000000337	-	83	75.122	ENSPCOG00000025736	-	95	73.267	Propithecus_coquereli
ENSAOCG00000000337	-	54	98.571	ENSPVAG00000000519	-	54	98.571	Pteropus_vampyrus
ENSAOCG00000000337	-	95	85.000	ENSPNAG00000022241	srsf1a	78	88.500	Pygocentrus_nattereri
ENSAOCG00000000337	-	82	87.192	ENSPNAG00000014601	srsf1b	80	87.192	Pygocentrus_nattereri
ENSAOCG00000000337	-	82	89.655	ENSRNOG00000050323	Srsf1	79	91.133	Rattus_norvegicus
ENSAOCG00000000337	-	100	86.508	ENSRBIG00000034445	-	99	90.278	Rhinopithecus_bieti
ENSAOCG00000000337	-	100	86.508	ENSRROG00000041506	-	99	90.278	Rhinopithecus_roxellana
ENSAOCG00000000337	-	100	86.508	ENSSBOG00000025377	-	99	90.278	Saimiri_boliviensis_boliviensis
ENSAOCG00000000337	-	82	90.640	ENSSHAG00000002552	-	80	91.133	Sarcophilus_harrisii
ENSAOCG00000000337	-	81	89.109	ENSSFOG00015004800	srsf1a	79	88.614	Scleropages_formosus
ENSAOCG00000000337	-	82	93.137	ENSSMAG00000009719	-	80	93.137	Scophthalmus_maximus
ENSAOCG00000000337	-	80	86.935	ENSSMAG00000007018	-	78	86.935	Scophthalmus_maximus
ENSAOCG00000000337	-	100	78.629	ENSSDUG00000003929	-	84	83.744	Seriola_dumerili
ENSAOCG00000000337	-	80	87.437	ENSSDUG00000011303	-	83	87.437	Seriola_dumerili
ENSAOCG00000000337	-	82	79.412	ENSSLDG00000016868	-	78	78.431	Seriola_lalandi_dorsalis
ENSAOCG00000000337	-	96	76.471	ENSSLDG00000016895	-	78	83.420	Seriola_lalandi_dorsalis
ENSAOCG00000000337	-	80	87.437	ENSSLDG00000010543	-	78	87.437	Seriola_lalandi_dorsalis
ENSAOCG00000000337	-	77	89.474	ENSSARG00000010949	-	63	89.474	Sorex_araneus
ENSAOCG00000000337	-	100	85.317	ENSSPUG00000000804	-	93	87.895	Sphenodon_punctatus
ENSAOCG00000000337	-	80	88.945	ENSSPAG00000022562	-	78	88.945	Stegastes_partitus
ENSAOCG00000000337	-	100	96.457	ENSSPAG00000014152	-	98	96.457	Stegastes_partitus
ENSAOCG00000000337	-	100	86.508	ENSSSCG00000017626	-	79	91.133	Sus_scrofa
ENSAOCG00000000337	-	56	87.050	ENSTGUG00000008416	-	72	89.209	Taeniopygia_guttata
ENSAOCG00000000337	-	80	87.437	ENSTRUG00000003691	srsf1a	78	87.437	Takifugu_rubripes
ENSAOCG00000000337	-	80	87.437	ENSTNIG00000016223	srsf1a	77	87.437	Tetraodon_nigroviridis
ENSAOCG00000000337	-	77	87.895	ENSTBEG00000015378	-	63	90.526	Tupaia_belangeri
ENSAOCG00000000337	-	56	89.130	ENSTTRG00000007310	SRSF1	72	91.304	Tursiops_truncatus
ENSAOCG00000000337	-	82	89.655	ENSUAMG00000009858	SRSF1	79	91.133	Ursus_americanus
ENSAOCG00000000337	-	100	86.508	ENSUMAG00000000455	-	78	91.133	Ursus_maritimus
ENSAOCG00000000337	-	82	89.163	ENSVPAG00000010094	SRSF1	79	90.640	Vicugna_pacos
ENSAOCG00000000337	-	100	86.508	ENSVVUG00000011882	-	78	91.133	Vulpes_vulpes
ENSAOCG00000000337	-	82	87.500	ENSXETG00000008954	srsf1	81	87.963	Xenopus_tropicalis
ENSAOCG00000000337	-	80	88.442	ENSXMAG00000011766	srsf1a	78	88.442	Xiphophorus_maculatus