EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000000462 (Gene tree)
Gene ID: 111564886
Gene Symbol: rbm28
Alias: zgc:56258
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 9170 bases
Position: chrNXFZ01006361.1:385814-394983
Accession: 111564886
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000004689	RRM_1	PF00076.22	5.9e-61	1	4
ENSAOCP00000004689	RRM_1	PF00076.22	5.9e-61	2	4
ENSAOCP00000004689	RRM_1	PF00076.22	5.9e-61	3	4
ENSAOCP00000004689	RRM_1	PF00076.22	5.9e-61	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000007615	-	3232	XM_023264745	ENSAOCP00000004689	766 (aa)	XP_023120513	UPI000C303729

Gene Model

Click here to download ENSAOCG00000000462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000000462's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000000462	rbm28	100	51.253	ENSG00000106344	RBM28	100	49.510	Homo_sapiens
ENSAOCG00000000462	rbm28	100	93.490	ENSAPOG00000015512	rbm28	57	96.347	Acanthochromis_polyacanthus
ENSAOCG00000000462	rbm28	97	57.471	ENSAMEG00000004776	RBM28	63	57.895	Ailuropoda_melanoleuca
ENSAOCG00000000462	rbm28	56	75.117	ENSACIG00000023153	rbm28	91	75.117	Amphilophus_citrinellus
ENSAOCG00000000462	rbm28	100	98.042	ENSAPEG00000012996	rbm28	100	98.042	Amphiprion_percula
ENSAOCG00000000462	rbm28	90	62.500	ENSANAG00000033922	RBM28	77	62.500	Aotus_nancymaae
ENSAOCG00000000462	rbm28	100	73.022	ENSACLG00000025024	rbm28	58	76.524	Astatotilapia_calliptera
ENSAOCG00000000462	rbm28	58	61.036	ENSAMXG00000000763	rbm28	98	60.183	Astyanax_mexicanus
ENSAOCG00000000462	rbm28	76	62.500	ENSBTAG00000017001	RBM28	77	62.500	Bos_taurus
ENSAOCG00000000462	rbm28	90	62.500	ENSCJAG00000017731	RBM28	76	62.500	Callithrix_jacchus
ENSAOCG00000000462	rbm28	100	51.617	ENSCAFG00000001667	RBM28	57	56.236	Canis_familiaris
ENSAOCG00000000462	rbm28	100	51.617	ENSCAFG00020021648	RBM28	57	56.236	Canis_lupus_dingo
ENSAOCG00000000462	rbm28	62	54.545	ENSCHIG00000014146	RBM28	57	55.708	Capra_hircus
ENSAOCG00000000462	rbm28	65	65.000	ENSTSYG00000002892	RBM28	77	65.000	Carlito_syrichta
ENSAOCG00000000462	rbm28	78	41.925	ENSCAPG00000013218	RBM28	70	70.526	Cavia_aperea
ENSAOCG00000000462	rbm28	100	50.830	ENSCPOG00000006253	RBM28	57	54.018	Cavia_porcellus
ENSAOCG00000000462	rbm28	79	62.500	ENSCCAG00000035105	RBM28	76	62.500	Cebus_capucinus
ENSAOCG00000000462	rbm28	100	51.000	ENSCATG00000040497	RBM28	76	62.500	Cercocebus_atys
ENSAOCG00000000462	rbm28	60	53.579	ENSCLAG00000003707	RBM28	60	54.091	Chinchilla_lanigera
ENSAOCG00000000462	rbm28	100	51.066	ENSCSAG00000010161	RBM28	57	54.751	Chlorocebus_sabaeus
ENSAOCG00000000462	rbm28	56	54.839	ENSCHOG00000001994	-	63	54.839	Choloepus_hoffmanni
ENSAOCG00000000462	rbm28	51	51.116	ENSCPBG00000018088	RBM28	76	52.709	Chrysemys_picta_bellii
ENSAOCG00000000462	rbm28	85	52.101	ENSCANG00000038397	RBM28	66	62.621	Colobus_angolensis_palliatus
ENSAOCG00000000462	rbm28	64	54.108	ENSCGRG00001021278	Rbm28	55	55.506	Cricetulus_griseus_chok1gshd
ENSAOCG00000000462	rbm28	100	51.928	ENSCGRG00000005098	Rbm28	57	55.506	Cricetulus_griseus_crigri
ENSAOCG00000000462	rbm28	100	63.718	ENSCSEG00000004212	rbm28	59	72.483	Cynoglossus_semilaevis
ENSAOCG00000000462	rbm28	58	75.778	ENSCVAG00000010493	rbm28	57	76.310	Cyprinodon_variegatus
ENSAOCG00000000462	rbm28	100	56.219	ENSDARG00000025332	rbm28	74	60.271	Danio_rerio
ENSAOCG00000000462	rbm28	100	52.081	ENSDNOG00000001124	RBM28	57	53.933	Dasypus_novemcinctus
ENSAOCG00000000462	rbm28	77	52.147	ENSDORG00000004184	Rbm28	85	55.479	Dipodomys_ordii
ENSAOCG00000000462	rbm28	100	46.915	ENSETEG00000007130	RBM28	56	52.113	Echinops_telfairi
ENSAOCG00000000462	rbm28	86	44.719	ENSEBUG00000004419	rbm28	91	43.371	Eptatretus_burgeri
ENSAOCG00000000462	rbm28	66	52.446	ENSEASG00005008528	RBM28	56	55.329	Equus_asinus_asinus
ENSAOCG00000000462	rbm28	66	52.446	ENSECAG00000007745	RBM28	56	55.000	Equus_caballus
ENSAOCG00000000462	rbm28	100	47.761	ENSEEUG00000002389	RBM28	57	51.351	Erinaceus_europaeus
ENSAOCG00000000462	rbm28	100	58.744	ENSELUG00000020602	rbm28	58	65.864	Esox_lucius
ENSAOCG00000000462	rbm28	100	51.558	ENSFCAG00000000946	RBM28	78	62.500	Felis_catus
ENSAOCG00000000462	rbm28	100	51.733	ENSFDAG00000010169	RBM28	58	54.751	Fukomys_damarensis
ENSAOCG00000000462	rbm28	86	63.288	ENSGMOG00000007091	rbm28	92	63.761	Gadus_morhua
ENSAOCG00000000462	rbm28	59	72.788	ENSGAFG00000004802	rbm28	96	72.955	Gambusia_affinis
ENSAOCG00000000462	rbm28	58	74.099	ENSGACG00000012612	rbm28	73	73.923	Gasterosteus_aculeatus
ENSAOCG00000000462	rbm28	85	53.125	ENSGAGG00000008873	RBM28	83	65.116	Gopherus_agassizii
ENSAOCG00000000462	rbm28	95	50.986	ENSGGOG00000004644	RBM28	58	54.157	Gorilla_gorilla
ENSAOCG00000000462	rbm28	95	73.489	ENSHBUG00000009611	rbm28	55	77.250	Haplochromis_burtoni
ENSAOCG00000000462	rbm28	100	51.276	ENSHGLG00000005409	RBM28	58	53.620	Heterocephalus_glaber_female
ENSAOCG00000000462	rbm28	100	51.276	ENSHGLG00100016458	RBM28	58	53.620	Heterocephalus_glaber_male
ENSAOCG00000000462	rbm28	99	48.780	ENSHCOG00000010597	rbm28	82	55.789	Hippocampus_comes
ENSAOCG00000000462	rbm28	60	47.109	ENSIPUG00000007103	rbm28	81	49.420	Ictalurus_punctatus
ENSAOCG00000000462	rbm28	100	50.314	ENSSTOG00000002169	RBM28	56	55.023	Ictidomys_tridecemlineatus
ENSAOCG00000000462	rbm28	79	59.116	ENSJJAG00000022400	Rbm28	85	59.116	Jaculus_jaculus
ENSAOCG00000000462	rbm28	58	74.610	ENSKMAG00000013348	rbm28	57	74.545	Kryptolebias_marmoratus
ENSAOCG00000000462	rbm28	59	73.836	ENSLBEG00000012998	rbm28	56	73.864	Labrus_bergylta
ENSAOCG00000000462	rbm28	100	60.309	ENSLOCG00000015541	rbm28	75	62.697	Lepisosteus_oculatus
ENSAOCG00000000462	rbm28	100	51.282	ENSLAFG00000010717	RBM28	57	55.909	Loxodonta_africana
ENSAOCG00000000462	rbm28	100	51.000	ENSMFAG00000031036	RBM28	76	62.500	Macaca_fascicularis
ENSAOCG00000000462	rbm28	100	50.936	ENSMMUG00000007250	RBM28	76	62.500	Macaca_mulatta
ENSAOCG00000000462	rbm28	100	51.751	ENSMNEG00000036970	RBM28	75	62.500	Macaca_nemestrina
ENSAOCG00000000462	rbm28	77	52.101	ENSMLEG00000037717	RBM28	71	59.434	Mandrillus_leucophaeus
ENSAOCG00000000462	rbm28	100	72.763	ENSMAMG00000008525	rbm28	58	78.182	Mastacembelus_armatus
ENSAOCG00000000462	rbm28	93	72.006	ENSMZEG00005019625	rbm28	62	76.524	Maylandia_zebra
ENSAOCG00000000462	rbm28	64	53.360	ENSMAUG00000002263	Rbm28	55	55.936	Mesocricetus_auratus
ENSAOCG00000000462	rbm28	69	51.224	ENSMICG00000000107	RBM28	60	54.649	Microcebus_murinus
ENSAOCG00000000462	rbm28	100	51.223	ENSMOCG00000014615	Rbm28	58	54.955	Microtus_ochrogaster
ENSAOCG00000000462	rbm28	65	61.044	ENSMMOG00000008600	rbm28	89	65.753	Mola_mola
ENSAOCG00000000462	rbm28	100	50.584	ENSMODG00000015151	RBM28	57	55.023	Monodelphis_domestica
ENSAOCG00000000462	rbm28	100	69.638	ENSMALG00000006419	rbm28	56	77.045	Monopterus_albus
ENSAOCG00000000462	rbm28	100	51.239	MGP_CAROLIEiJ_G0028162	Rbm28	57	55.479	Mus_caroli
ENSAOCG00000000462	rbm28	100	52.021	ENSMUSG00000029701	Rbm28	58	55.936	Mus_musculus
ENSAOCG00000000462	rbm28	100	51.866	MGP_PahariEiJ_G0021920	Rbm28	57	55.708	Mus_pahari
ENSAOCG00000000462	rbm28	100	51.630	MGP_SPRETEiJ_G0029162	Rbm28	58	55.479	Mus_spretus
ENSAOCG00000000462	rbm28	100	52.163	ENSMPUG00000006511	RBM28	57	55.782	Mustela_putorius_furo
ENSAOCG00000000462	rbm28	64	53.427	ENSMLUG00000002186	RBM28	57	54.072	Myotis_lucifugus
ENSAOCG00000000462	rbm28	100	51.804	ENSNGAG00000006480	-	58	52.495	Nannospalax_galili
ENSAOCG00000000462	rbm28	100	50.973	ENSNGAG00000017946	-	57	52.759	Nannospalax_galili
ENSAOCG00000000462	rbm28	100	51.496	ENSNLEG00000012307	RBM28	76	62.500	Nomascus_leucogenys
ENSAOCG00000000462	rbm28	81	62.346	ENSMEUG00000009611	RBM28	82	63.522	Notamacropus_eugenii
ENSAOCG00000000462	rbm28	100	48.958	ENSODEG00000003213	-	56	52.055	Octodon_degus
ENSAOCG00000000462	rbm28	76	54.412	ENSODEG00000013217	-	77	57.025	Octodon_degus
ENSAOCG00000000462	rbm28	100	72.879	ENSONIG00000014924	rbm28	57	76.749	Oreochromis_niloticus
ENSAOCG00000000462	rbm28	100	47.759	ENSOANG00000000815	-	58	49.888	Ornithorhynchus_anatinus
ENSAOCG00000000462	rbm28	64	53.600	ENSOCUG00000003009	RBM28	56	55.088	Oryctolagus_cuniculus
ENSAOCG00000000462	rbm28	99	69.961	ENSORLG00000009636	rbm28	57	74.318	Oryzias_latipes
ENSAOCG00000000462	rbm28	58	75.442	ENSORLG00020002123	rbm28	60	74.545	Oryzias_latipes_hni
ENSAOCG00000000462	rbm28	85	78.922	ENSORLG00015015030	rbm28	96	76.961	Oryzias_latipes_hsok
ENSAOCG00000000462	rbm28	59	76.211	ENSOMEG00000007801	rbm28	58	76.298	Oryzias_melastigma
ENSAOCG00000000462	rbm28	92	53.033	ENSOGAG00000006011	RBM28	93	53.968	Otolemur_garnettii
ENSAOCG00000000462	rbm28	100	51.305	ENSOARG00000002547	RBM28	57	55.251	Ovis_aries
ENSAOCG00000000462	rbm28	100	51.066	ENSPPAG00000041730	RBM28	76	62.500	Pan_paniscus
ENSAOCG00000000462	rbm28	100	50.636	ENSPPRG00000004420	RBM28	78	62.500	Panthera_pardus
ENSAOCG00000000462	rbm28	100	50.891	ENSPTIG00000008550	RBM28	78	62.500	Panthera_tigris_altaica
ENSAOCG00000000462	rbm28	100	51.125	ENSPTRG00000019659	RBM28	76	62.500	Pan_troglodytes
ENSAOCG00000000462	rbm28	100	50.687	ENSPANG00000022295	RBM28	76	62.500	Papio_anubis
ENSAOCG00000000462	rbm28	99	56.010	ENSPKIG00000023453	rbm28	61	58.873	Paramormyrops_kingsleyae
ENSAOCG00000000462	rbm28	90	66.977	ENSPMGG00000012840	rbm28	97	66.977	Periophthalmus_magnuspinnatus
ENSAOCG00000000462	rbm28	100	50.257	ENSPCIG00000012810	RBM28	58	52.116	Phascolarctos_cinereus
ENSAOCG00000000462	rbm28	100	66.710	ENSPFOG00000018209	rbm28	57	73.182	Poecilia_formosa
ENSAOCG00000000462	rbm28	99	66.448	ENSPLAG00000016078	rbm28	55	72.644	Poecilia_latipinna
ENSAOCG00000000462	rbm28	100	66.623	ENSPMEG00000004292	rbm28	57	73.016	Poecilia_mexicana
ENSAOCG00000000462	rbm28	58	72.321	ENSPREG00000014287	rbm28	73	72.540	Poecilia_reticulata
ENSAOCG00000000462	rbm28	100	51.690	ENSPPYG00000017975	RBM28	57	54.157	Pongo_abelii
ENSAOCG00000000462	rbm28	73	50.975	ENSPCAG00000008223	RBM28	82	50.700	Procavia_capensis
ENSAOCG00000000462	rbm28	87	62.500	ENSPCOG00000016797	RBM28	75	62.500	Propithecus_coquereli
ENSAOCG00000000462	rbm28	72	61.111	ENSPVAG00000005443	RBM28	67	63.212	Pteropus_vampyrus
ENSAOCG00000000462	rbm28	100	72.763	ENSPNYG00000014003	rbm28	58	76.298	Pundamilia_nyererei
ENSAOCG00000000462	rbm28	100	51.166	ENSRNOG00000005468	Rbm28	84	59.716	Rattus_norvegicus
ENSAOCG00000000462	rbm28	100	50.807	ENSRBIG00000033990	RBM28	76	62.500	Rhinopithecus_bieti
ENSAOCG00000000462	rbm28	100	51.061	ENSRROG00000040747	RBM28	76	62.500	Rhinopithecus_roxellana
ENSAOCG00000000462	rbm28	91	46.782	ENSSBOG00000012308	RBM28	74	59.434	Saimiri_boliviensis_boliviensis
ENSAOCG00000000462	rbm28	96	50.134	ENSSHAG00000017017	RBM28	58	54.545	Sarcophilus_harrisii
ENSAOCG00000000462	rbm28	57	63.288	ENSSFOG00015001231	rbm28	59	63.063	Scleropages_formosus
ENSAOCG00000000462	rbm28	67	65.370	ENSSMAG00000003885	rbm28	88	67.574	Scophthalmus_maximus
ENSAOCG00000000462	rbm28	59	82.781	ENSSDUG00000014270	rbm28	86	82.805	Seriola_dumerili
ENSAOCG00000000462	rbm28	100	73.806	ENSSLDG00000020099	rbm28	57	81.222	Seriola_lalandi_dorsalis
ENSAOCG00000000462	rbm28	77	58.140	ENSSARG00000008303	RBM28	75	58.311	Sorex_araneus
ENSAOCG00000000462	rbm28	70	51.236	ENSSPUG00000000838	RBM28	77	63.235	Sphenodon_punctatus
ENSAOCG00000000462	rbm28	57	86.005	ENSSPAG00000023305	rbm28	61	85.941	Stegastes_partitus
ENSAOCG00000000462	rbm28	100	51.707	ENSSSCG00000031847	RBM28	57	54.831	Sus_scrofa
ENSAOCG00000000462	rbm28	100	62.916	ENSTRUG00000013311	rbm28	57	67.338	Takifugu_rubripes
ENSAOCG00000000462	rbm28	99	60.648	ENSTNIG00000017962	rbm28	58	67.720	Tetraodon_nigroviridis
ENSAOCG00000000462	rbm28	81	54.969	ENSTBEG00000012749	RBM28	73	54.747	Tupaia_belangeri
ENSAOCG00000000462	rbm28	100	50.434	ENSTTRG00000013647	RBM28	87	54.525	Tursiops_truncatus
ENSAOCG00000000462	rbm28	100	49.418	ENSUAMG00000006949	RBM28	83	60.190	Ursus_americanus
ENSAOCG00000000462	rbm28	100	52.078	ENSUMAG00000005997	RBM28	57	56.364	Ursus_maritimus
ENSAOCG00000000462	rbm28	85	48.968	ENSVPAG00000008304	RBM28	70	72.917	Vicugna_pacos
ENSAOCG00000000462	rbm28	100	51.488	ENSVVUG00000007270	RBM28	57	56.009	Vulpes_vulpes
ENSAOCG00000000462	rbm28	63	49.899	ENSXETG00000009271	rbm28	57	50.545	Xenopus_tropicalis
ENSAOCG00000000462	rbm28	58	68.374	ENSXCOG00000020357	rbm28	90	68.565	Xiphophorus_couchianus
ENSAOCG00000000462	rbm28	58	72.360	ENSXMAG00000004415	rbm28	57	72.811	Xiphophorus_maculatus