EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000000570 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 4879 bases
Position: chrNXFZ01001919.1:489493-494371
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000023363	zf-C2H2	PF00096.26	2.7e-48	1	6
ENSAOCP00000023363	zf-C2H2	PF00096.26	2.7e-48	2	6
ENSAOCP00000023363	zf-C2H2	PF00096.26	2.7e-48	3	6
ENSAOCP00000023363	zf-C2H2	PF00096.26	2.7e-48	4	6
ENSAOCP00000023363	zf-C2H2	PF00096.26	2.7e-48	5	6
ENSAOCP00000023363	zf-C2H2	PF00096.26	2.7e-48	6	6
ENSAOCP00000023363	zf-met	PF12874.7	4.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000005625	-	978	-	ENSAOCP00000023363	325 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000000570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000000570's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000000570	-	63	41.212	ENSAOCG00000001327	-	87	41.212
ENSAOCG00000000570	-	66	42.336	ENSAOCG00000001325	-	71	42.336
ENSAOCG00000000570	-	71	77.540	ENSAOCG00000016088	-	87	77.540
ENSAOCG00000000570	-	93	60.265	ENSAOCG00000006793	-	99	60.265
ENSAOCG00000000570	-	97	65.686	ENSAOCG00000018307	-	99	65.686
ENSAOCG00000000570	-	78	58.095	ENSAOCG00000022276	-	99	58.706
ENSAOCG00000000570	-	63	46.907	ENSAOCG00000002795	-	89	46.429
ENSAOCG00000000570	-	95	64.532	ENSAOCG00000018484	-	96	64.532
ENSAOCG00000000570	-	71	37.963	ENSAOCG00000019850	si:ch211-216l23.1	59	37.273
ENSAOCG00000000570	-	94	50.000	ENSAOCG00000020652	-	78	50.000
ENSAOCG00000000570	-	85	56.522	ENSAOCG00000016737	-	99	56.522
ENSAOCG00000000570	-	97	63.054	ENSAOCG00000022459	-	99	56.542
ENSAOCG00000000570	-	98	41.304	ENSAOCG00000009970	-	88	41.304
ENSAOCG00000000570	-	93	38.403	ENSAOCG00000012813	-	91	41.981
ENSAOCG00000000570	-	95	54.930	ENSAOCG00000022529	-	78	54.930
ENSAOCG00000000570	-	97	57.820	ENSAOCG00000003277	-	88	59.799
ENSAOCG00000000570	-	64	49.223	ENSAOCG00000003494	si:dkey-7i4.5	91	49.223
ENSAOCG00000000570	-	64	46.354	ENSAOCG00000007388	-	61	46.053
ENSAOCG00000000570	-	69	49.744	ENSAOCG00000013978	-	90	48.768
ENSAOCG00000000570	-	59	42.157	ENSAOCG00000021557	scrt2	51	42.157
ENSAOCG00000000570	-	97	49.261	ENSAOCG00000017595	-	90	49.261
ENSAOCG00000000570	-	60	44.554	ENSAOCG00000018003	snai1a	57	43.119
ENSAOCG00000000570	-	79	43.103	ENSAOCG00000013656	-	68	43.103
ENSAOCG00000000570	-	61	41.284	ENSAOCG00000019753	-	55	41.284
ENSAOCG00000000570	-	64	34.848	ENSAOCG00000010173	znf407	62	34.848
ENSAOCG00000000570	-	97	40.331	ENSAOCG00000012823	-	75	40.331
ENSAOCG00000000570	-	81	44.311	ENSAOCG00000014769	-	80	44.311
ENSAOCG00000000570	-	63	51.163	ENSAOCG00000016409	-	59	50.000
ENSAOCG00000000570	-	98	45.714	ENSAOCG00000022004	znf236	73	45.714
ENSAOCG00000000570	-	77	41.593	ENSAOCG00000017968	snai2	60	41.593
ENSAOCG00000000570	-	97	36.727	ENSAOCG00000016897	-	84	36.727
ENSAOCG00000000570	-	85	39.823	ENSAOCG00000023304	-	63	39.823
ENSAOCG00000000570	-	96	58.268	ENSAOCG00000002585	-	87	58.268
ENSAOCG00000000570	-	98	49.721	ENSAOCG00000014651	-	86	53.476
ENSAOCG00000000570	-	66	38.596	ENSAOCG00000012062	znf646	78	38.028
ENSAOCG00000000570	-	63	50.785	ENSAOCG00000017602	-	59	50.785
ENSAOCG00000000570	-	59	39.823	ENSAOCG00000003910	scrt1b	53	39.823
ENSAOCG00000000570	-	67	43.396	ENSAOCG00000022283	-	86	43.396
ENSAOCG00000000570	-	60	37.864	ENSAOCG00000013589	-	88	38.650
ENSAOCG00000000570	-	65	40.404	ENSAOCG00000014818	znf319b	77	38.136
ENSAOCG00000000570	-	98	50.829	ENSAOCG00000022375	-	91	56.284
ENSAOCG00000000570	-	94	69.767	ENSAOCG00000013672	-	99	61.589
ENSAOCG00000000570	-	97	53.968	ENSAOCG00000011204	-	72	56.122
ENSAOCG00000000570	-	98	48.551	ENSAOCG00000007134	-	88	36.137
ENSAOCG00000000570	-	69	42.424	ENSAOCG00000021187	gfi1b	52	42.424
ENSAOCG00000000570	-	60	49.744	ENSAOCG00000017588	-	82	35.040
ENSAOCG00000000570	-	97	54.545	ENSAOCG00000014165	-	88	54.545
ENSAOCG00000000570	-	97	63.054	ENSAOCG00000013130	-	92	63.054
ENSAOCG00000000570	-	98	43.396	ENSAOCG00000016905	-	93	43.396
ENSAOCG00000000570	-	66	44.828	ENSAOCG00000004564	-	81	44.828
ENSAOCG00000000570	-	64	47.009	ENSAOCG00000009098	-	50	32.934
ENSAOCG00000000570	-	63	45.378	ENSAOCG00000021565	-	51	45.378
ENSAOCG00000000570	-	65	68.590	ENSAOCG00000000448	-	93	68.590
ENSAOCG00000000570	-	94	68.132	ENSAOCG00000015369	-	95	68.132
ENSAOCG00000000570	-	74	37.234	ENSAOCG00000015241	PRDM15	55	37.234
ENSAOCG00000000570	-	63	45.361	ENSAOCG00000005965	-	68	45.361
ENSAOCG00000000570	-	63	55.556	ENSAOCG00000024256	-	87	55.556
ENSAOCG00000000570	-	65	45.146	ENSAOCG00000010471	-	81	45.146
ENSAOCG00000000570	-	84	66.788	ENSAOCG00000013710	-	99	66.788
ENSAOCG00000000570	-	72	49.162	ENSAOCG00000012903	-	74	49.162
ENSAOCG00000000570	-	98	47.783	ENSAOCG00000013934	-	88	47.783
ENSAOCG00000000570	-	77	38.756	ENSAOCG00000005450	ZNF319	87	38.756
ENSAOCG00000000570	-	80	67.568	ENSAOCG00000024281	-	99	67.568
ENSAOCG00000000570	-	66	43.269	ENSAOCG00000001341	-	87	43.269
ENSAOCG00000000570	-	69	51.220	ENSAOCG00000007347	-	81	51.220
ENSAOCG00000000570	-	63	41.818	ENSAOCG00000010954	-	52	41.818
ENSAOCG00000000570	-	66	43.842	ENSAOCG00000001615	-	82	43.842
ENSAOCG00000000570	-	81	44.311	ENSAOCG00000015944	-	73	44.311
ENSAOCG00000000570	-	97	44.565	ENSAOCG00000012829	-	71	44.565
ENSAOCG00000000570	-	66	47.573	ENSAOCG00000007045	-	82	47.573
ENSAOCG00000000570	-	96	62.416	ENSAOCG00000022675	-	96	60.784
ENSAOCG00000000570	-	98	64.035	ENSAOCG00000018543	-	94	64.035
ENSAOCG00000000570	-	98	48.974	ENSAOCG00000013578	-	93	52.846
ENSAOCG00000000570	-	97	58.427	ENSAOCG00000020830	-	94	63.184
ENSAOCG00000000570	-	62	46.354	ENSAOCG00000014806	prdm5	84	46.354
ENSAOCG00000000570	-	62	50.254	ENSAOCG00000010498	-	65	47.030
ENSAOCG00000000570	-	97	49.550	ENSAOCG00000002430	-	93	46.667
ENSAOCG00000000570	-	97	57.635	ENSAOCG00000016287	-	88	57.635
ENSAOCG00000000570	-	64	41.270	ENSAOCG00000006744	-	84	41.270
ENSAOCG00000000570	-	95	39.726	ENSAOCG00000015987	-	60	39.726
ENSAOCG00000000570	-	97	49.839	ENSAOCG00000022079	-	93	51.659
ENSAOCG00000000570	-	87	47.445	ENSAOCG00000013124	-	69	47.445
ENSAOCG00000000570	-	66	45.729	ENSAOCG00000012653	-	96	45.729
ENSAOCG00000000570	-	95	75.081	ENSAOCG00000015586	-	94	75.081
ENSAOCG00000000570	-	97	41.846	ENSAOCG00000020624	-	92	46.207
ENSAOCG00000000570	-	71	39.378	ENSAOCG00000008304	zbtb48	54	40.000
ENSAOCG00000000570	-	62	54.930	ENSAOCG00000019475	-	83	54.930
ENSAOCG00000000570	-	92	45.455	ENSAOCG00000017838	bcl6b	53	45.455
ENSAOCG00000000570	-	70	43.350	ENSAOCG00000004559	-	90	43.350
ENSAOCG00000000570	-	62	41.379	ENSAOCG00000018579	-	70	41.379
ENSAOCG00000000570	-	98	44.059	ENSAOCG00000013951	-	81	44.059

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000000570	-	63	58.696	ENSAPOG00000005767	-	100	58.696	Acanthochromis_polyacanthus
ENSAOCG00000000570	-	97	48.039	ENSAPEG00000018796	-	88	50.495	Amphiprion_percula
ENSAOCG00000000570	-	63	42.169	ENSCVAG00000018507	-	71	42.487	Cyprinodon_variegatus
ENSAOCG00000000570	-	70	40.415	ENSFHEG00000022534	-	96	40.415	Fundulus_heteroclitus
ENSAOCG00000000570	-	98	45.098	ENSHCOG00000013972	-	61	45.098	Hippocampus_comes
ENSAOCG00000000570	-	98	52.593	ENSKMAG00000013745	-	79	52.593	Kryptolebias_marmoratus
ENSAOCG00000000570	-	97	58.427	ENSMAMG00000018114	-	93	56.855	Mastacembelus_armatus
ENSAOCG00000000570	-	63	43.216	ENSMAMG00000009817	-	83	41.096	Mastacembelus_armatus
ENSAOCG00000000570	-	98	57.265	ENSMZEG00005016808	-	97	57.265	Maylandia_zebra
ENSAOCG00000000570	-	96	52.459	ENSMALG00000012757	-	90	52.459	Monopterus_albus
ENSAOCG00000000570	-	85	46.545	ENSMALG00000004579	-	92	55.882	Monopterus_albus
ENSAOCG00000000570	-	70	56.863	ENSMALG00000001085	-	97	56.863	Monopterus_albus
ENSAOCG00000000570	-	65	62.353	ENSMALG00000012116	-	96	62.353	Monopterus_albus
ENSAOCG00000000570	-	97	51.261	ENSMALG00000008930	-	92	49.438	Monopterus_albus
ENSAOCG00000000570	-	90	61.446	ENSNBRG00000013501	-	97	61.446	Neolamprologus_brichardi
ENSAOCG00000000570	-	63	39.896	ENSOMEG00000021420	-	67	39.896	Oryzias_melastigma
ENSAOCG00000000570	-	63	41.333	ENSPREG00000014898	-	67	41.333	Poecilia_reticulata
ENSAOCG00000000570	-	64	54.819	ENSPNYG00000007756	-	76	50.543	Pundamilia_nyererei
ENSAOCG00000000570	-	64	54.745	ENSSDUG00000001263	-	94	54.745	Seriola_dumerili
ENSAOCG00000000570	-	93	44.068	ENSSLDG00000023661	-	96	44.068	Seriola_lalandi_dorsalis
ENSAOCG00000000570	-	95	51.748	ENSTRUG00000012273	-	90	50.649	Takifugu_rubripes
ENSAOCG00000000570	-	97	54.082	ENSTRUG00000022206	-	82	54.082	Takifugu_rubripes
ENSAOCG00000000570	-	74	52.764	ENSTRUG00000022919	-	78	52.764	Takifugu_rubripes
ENSAOCG00000000570	-	96	55.789	ENSTRUG00000001268	-	98	55.789	Takifugu_rubripes
ENSAOCG00000000570	-	66	59.028	ENSTRUG00000003111	-	84	59.028	Takifugu_rubripes
ENSAOCG00000000570	-	97	47.917	ENSTRUG00000023925	-	91	47.917	Takifugu_rubripes
ENSAOCG00000000570	-	65	52.683	ENSTNIG00000005856	-	99	52.683	Tetraodon_nigroviridis
ENSAOCG00000000570	-	65	53.500	ENSXCOG00000019492	-	87	53.500	Xiphophorus_couchianus
ENSAOCG00000000570	-	63	50.820	ENSXMAG00000022297	-	99	50.820	Xiphophorus_maculatus