EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000000615 (Gene tree)
Gene ID: 111575872
Gene Symbol: scaf4a
Alias: fa96d07|si:dkey-50p8.3|wu:fa96d07
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 11191 bases
Position: chrNXFZ01003099.1:173063-184253
Accession: 111575872
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000006402	RRM_1	PF00076.22	8.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000004658	-	5709	XM_023281273	ENSAOCP00000006402	1116 (aa)	XP_023137041	UPI000C316F9C

Gene Model

Click here to download ENSAOCG00000000615's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000000615's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000000615	scaf4a	63	58.845	ENSAOCG00000010433	scaf4b	54	76.923

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000000615	scaf4a	55	58.761	ENSG00000156304	SCAF4	69	57.031	Homo_sapiens
ENSAOCG00000000615	scaf4a	100	97.135	ENSAPOG00000002946	scaf4a	100	97.135	Acanthochromis_polyacanthus
ENSAOCG00000000615	scaf4a	100	99.194	ENSAPEG00000021229	scaf4a	100	99.194	Amphiprion_percula
ENSAOCG00000000615	scaf4a	63	58.845	ENSAPEG00000010913	scaf4b	54	76.923	Amphiprion_percula
ENSAOCG00000000615	scaf4a	58	59.040	ENSAPLG00000002509	SCAF4	78	54.472	Anas_platyrhynchos
ENSAOCG00000000615	scaf4a	54	62.555	ENSACAG00000002569	SCAF4	68	49.485	Anolis_carolinensis
ENSAOCG00000000615	scaf4a	50	61.905	ENSACLG00000024833	scaf4b	62	72.093	Astatotilapia_calliptera
ENSAOCG00000000615	scaf4a	88	54.457	ENSAMXG00000008585	scaf4a	84	60.130	Astyanax_mexicanus
ENSAOCG00000000615	scaf4a	55	59.070	ENSCJAG00000008993	SCAF4	77	60.440	Callithrix_jacchus
ENSAOCG00000000615	scaf4a	54	60.417	ENSCAFG00020026019	SCAF4	69	60.156	Canis_lupus_dingo
ENSAOCG00000000615	scaf4a	55	58.788	ENSCATG00000030379	SCAF4	79	53.476	Cercocebus_atys
ENSAOCG00000000615	scaf4a	55	58.522	ENSCSAG00000009438	SCAF4	79	53.305	Chlorocebus_sabaeus
ENSAOCG00000000615	scaf4a	55	58.761	ENSCANG00000029847	SCAF4	69	57.031	Colobus_angolensis_palliatus
ENSAOCG00000000615	scaf4a	100	73.427	ENSCSEG00000019549	scaf4a	99	70.629	Cynoglossus_semilaevis
ENSAOCG00000000615	scaf4a	83	57.684	ENSDARG00000077093	scaf4a	79	57.174	Danio_rerio
ENSAOCG00000000615	scaf4a	55	84.375	ENSELUG00000009909	scaf4a	89	85.340	Esox_lucius
ENSAOCG00000000615	scaf4a	100	78.008	ENSFHEG00000017866	scaf4a	89	80.080	Fundulus_heteroclitus
ENSAOCG00000000615	scaf4a	59	58.757	ENSGALG00000033965	SCAF4	86	52.875	Gallus_gallus
ENSAOCG00000000615	scaf4a	67	81.950	ENSGAFG00000019460	scaf4a	83	82.861	Gambusia_affinis
ENSAOCG00000000615	scaf4a	73	80.717	ENSGACG00000020580	scaf4a	85	81.735	Gasterosteus_aculeatus
ENSAOCG00000000615	scaf4a	100	82.424	ENSHBUG00000007920	scaf4a	100	81.039	Haplochromis_burtoni
ENSAOCG00000000615	scaf4a	81	59.420	ENSIPUG00000011285	scaf4	83	75.000	Ictalurus_punctatus
ENSAOCG00000000615	scaf4a	64	57.554	ENSKMAG00000005742	scaf4b	55	75.309	Kryptolebias_marmoratus
ENSAOCG00000000615	scaf4a	98	78.506	ENSLBEG00000014675	scaf4a	100	81.603	Labrus_bergylta
ENSAOCG00000000615	scaf4a	54	47.583	ENSLOCG00000009162	scaf4a	86	58.403	Lepisosteus_oculatus
ENSAOCG00000000615	scaf4a	56	62.346	ENSLAFG00000010710	SCAF4	81	54.185	Loxodonta_africana
ENSAOCG00000000615	scaf4a	55	58.788	ENSMFAG00000037668	SCAF4	78	53.728	Macaca_fascicularis
ENSAOCG00000000615	scaf4a	55	58.788	ENSMMUG00000001712	SCAF4	78	53.476	Macaca_mulatta
ENSAOCG00000000615	scaf4a	55	58.788	ENSMNEG00000032966	SCAF4	78	53.568	Macaca_nemestrina
ENSAOCG00000000615	scaf4a	54	58.308	ENSMLEG00000039674	SCAF4	78	53.081	Mandrillus_leucophaeus
ENSAOCG00000000615	scaf4a	74	81.460	ENSMAMG00000013223	scaf4a	100	78.563	Mastacembelus_armatus
ENSAOCG00000000615	scaf4a	99	82.281	ENSMZEG00005024349	scaf4a	100	81.930	Maylandia_zebra
ENSAOCG00000000615	scaf4a	58	58.369	ENSMGAG00000014515	SCAF4	86	52.435	Meleagris_gallopavo
ENSAOCG00000000615	scaf4a	55	59.939	ENSMICG00000005256	SCAF4	69	56.693	Microcebus_murinus
ENSAOCG00000000615	scaf4a	55	57.675	ENSNGAG00000005214	Scaf4	79	52.340	Nannospalax_galili
ENSAOCG00000000615	scaf4a	100	82.084	ENSONIG00000004687	scaf4a	100	80.879	Oreochromis_niloticus
ENSAOCG00000000615	scaf4a	100	72.466	ENSORLG00000004384	scaf4a	64	80.134	Oryzias_latipes
ENSAOCG00000000615	scaf4a	100	71.199	ENSORLG00020011857	scaf4a	64	78.121	Oryzias_latipes_hni
ENSAOCG00000000615	scaf4a	65	55.914	ENSORLG00020013853	scaf4b	57	70.349	Oryzias_latipes_hni
ENSAOCG00000000615	scaf4a	100	73.214	ENSORLG00015017880	scaf4a	100	72.704	Oryzias_latipes_hsok
ENSAOCG00000000615	scaf4a	99	74.027	ENSOMEG00000014482	scaf4a	98	81.074	Oryzias_melastigma
ENSAOCG00000000615	scaf4a	55	58.761	ENSPPAG00000028535	SCAF4	69	57.031	Pan_paniscus
ENSAOCG00000000615	scaf4a	55	58.761	ENSPTRG00000013848	SCAF4	69	57.031	Pan_troglodytes
ENSAOCG00000000615	scaf4a	55	58.788	ENSPANG00000017332	SCAF4	78	51.238	Papio_anubis
ENSAOCG00000000615	scaf4a	61	65.890	ENSPKIG00000022408	scaf4a	99	63.973	Paramormyrops_kingsleyae
ENSAOCG00000000615	scaf4a	52	39.704	ENSPSIG00000014242	SCAF4	83	54.017	Pelodiscus_sinensis
ENSAOCG00000000615	scaf4a	100	51.571	ENSPMGG00000016741	scaf4a	66	72.464	Periophthalmus_magnuspinnatus
ENSAOCG00000000615	scaf4a	85	74.510	ENSPFOG00000017156	scaf4a	97	75.391	Poecilia_formosa
ENSAOCG00000000615	scaf4a	67	81.070	ENSPLAG00000001972	scaf4a	91	82.950	Poecilia_latipinna
ENSAOCG00000000615	scaf4a	57	57.353	ENSPLAG00000004403	-	51	74.306	Poecilia_latipinna
ENSAOCG00000000615	scaf4a	58	57.353	ENSPMEG00000006666	-	51	75.000	Poecilia_mexicana
ENSAOCG00000000615	scaf4a	57	58.088	ENSPREG00000013510	scaf4b	57	58.937	Poecilia_reticulata
ENSAOCG00000000615	scaf4a	55	58.333	ENSPCOG00000018710	SCAF4	69	56.283	Propithecus_coquereli
ENSAOCG00000000615	scaf4a	50	61.905	ENSPNYG00000010526	scaf4b	62	72.093	Pundamilia_nyererei
ENSAOCG00000000615	scaf4a	51	74.638	ENSPNAG00000015199	-	50	74.638	Pygocentrus_nattereri
ENSAOCG00000000615	scaf4a	70	59.783	ENSPNAG00000016892	scaf4a	84	60.714	Pygocentrus_nattereri
ENSAOCG00000000615	scaf4a	55	58.610	ENSRROG00000029488	SCAF4	79	53.469	Rhinopithecus_roxellana
ENSAOCG00000000615	scaf4a	58	51.573	ENSSFOG00015006338	scaf4a	83	54.106	Scleropages_formosus
ENSAOCG00000000615	scaf4a	79	44.173	ENSSMAG00000003738	scaf4b	81	48.991	Scophthalmus_maximus
ENSAOCG00000000615	scaf4a	99	78.504	ENSSMAG00000017901	scaf4a	72	83.077	Scophthalmus_maximus
ENSAOCG00000000615	scaf4a	100	86.312	ENSSDUG00000012918	scaf4a	100	85.789	Seriola_dumerili
ENSAOCG00000000615	scaf4a	100	86.475	ENSSLDG00000021671	scaf4a	100	85.864	Seriola_lalandi_dorsalis
ENSAOCG00000000615	scaf4a	61	48.830	ENSTRUG00000009536	-	54	75.352	Takifugu_rubripes
ENSAOCG00000000615	scaf4a	66	64.865	ENSTRUG00000023543	scaf4a	89	75.817	Takifugu_rubripes
ENSAOCG00000000615	scaf4a	61	54.731	ENSXETG00000007351	scaf4	87	50.853	Xenopus_tropicalis