EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000001157 (Gene tree)
Gene ID: 111570389
Gene Symbol: mbd4
Alias: -
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 4130 bases
Position: chrNXFZ01002447.1:332708-336837
Accession: 111570389
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000012242	MBD	PF01429.19	1.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000030566	-	2465	XM_023273129	ENSAOCP00000012242	474 (aa)	XP_023128897	UPI000C3002CB

Gene Model

Click here to download ENSAOCG00000001157's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000001157's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000001157	mbd4	95	42.715	ENSG00000129071	MBD4	65	77.647	Homo_sapiens
ENSAOCG00000001157	mbd4	100	91.807	ENSAPOG00000021668	mbd4	100	91.807	Acanthochromis_polyacanthus
ENSAOCG00000001157	mbd4	100	98.523	ENSAPEG00000016131	mbd4	100	98.523	Amphiprion_percula
ENSAOCG00000001157	mbd4	100	69.792	ENSATEG00000014594	MBD4	90	69.792	Anabas_testudineus
ENSAOCG00000001157	mbd4	95	46.035	ENSAMXG00000017271	mbd4	77	61.089	Astyanax_mexicanus
ENSAOCG00000001157	mbd4	62	59.449	ENSBTAG00000021645	MBD4	57	59.449	Bos_taurus
ENSAOCG00000001157	mbd4	95	44.000	ENSCAFG00000004867	MBD4	85	42.713	Canis_familiaris
ENSAOCG00000001157	mbd4	95	44.000	ENSCAFG00020007082	MBD4	85	42.713	Canis_lupus_dingo
ENSAOCG00000001157	mbd4	62	61.290	ENSCHIG00000009760	MBD4	55	61.290	Capra_hircus
ENSAOCG00000001157	mbd4	62	58.400	ENSCCAG00000029796	MBD4	53	58.400	Cebus_capucinus
ENSAOCG00000001157	mbd4	62	59.494	ENSCATG00000035211	MBD4	52	59.494	Cercocebus_atys
ENSAOCG00000001157	mbd4	94	42.200	ENSCLAG00000008974	MBD4	86	42.200	Chinchilla_lanigera
ENSAOCG00000001157	mbd4	62	59.916	ENSCSAG00000009037	MBD4	52	59.916	Chlorocebus_sabaeus
ENSAOCG00000001157	mbd4	62	60.338	ENSCANG00000007120	MBD4	52	60.338	Colobus_angolensis_palliatus
ENSAOCG00000001157	mbd4	95	42.656	ENSDNOG00000049619	MBD4	54	60.976	Dasypus_novemcinctus
ENSAOCG00000001157	mbd4	52	63.314	ENSEBUG00000010816	mbd4	56	63.314	Eptatretus_burgeri
ENSAOCG00000001157	mbd4	95	42.857	ENSEASG00005014800	MBD4	86	42.857	Equus_asinus_asinus
ENSAOCG00000001157	mbd4	95	42.742	ENSECAG00000022106	MBD4	86	42.742	Equus_caballus
ENSAOCG00000001157	mbd4	58	59.292	ENSEEUG00000011459	MBD4	52	59.292	Erinaceus_europaeus
ENSAOCG00000001157	mbd4	97	49.608	ENSELUG00000018483	MBD4	84	50.392	Esox_lucius
ENSAOCG00000001157	mbd4	62	60.643	ENSFCAG00000000083	MBD4	54	60.643	Felis_catus
ENSAOCG00000001157	mbd4	95	52.401	ENSGMOG00000013830	mbd4	100	51.572	Gadus_morhua
ENSAOCG00000001157	mbd4	98	60.470	ENSGAFG00000016011	mbd4	98	61.863	Gambusia_affinis
ENSAOCG00000001157	mbd4	86	50.000	ENSGACG00000001970	-	84	50.000	Gasterosteus_aculeatus
ENSAOCG00000001157	mbd4	62	61.017	ENSGAGG00000018644	MBD4	50	61.017	Gopherus_agassizii
ENSAOCG00000001157	mbd4	85	50.877	ENSHGLG00000009034	MBD4	69	50.877	Heterocephalus_glaber_female
ENSAOCG00000001157	mbd4	85	50.877	ENSHGLG00100000135	MBD4	69	50.877	Heterocephalus_glaber_male
ENSAOCG00000001157	mbd4	98	64.449	ENSKMAG00000015015	mbd4	100	64.449	Kryptolebias_marmoratus
ENSAOCG00000001157	mbd4	100	64.375	ENSLBEG00000005669	MBD4	91	64.375	Labrus_bergylta
ENSAOCG00000001157	mbd4	76	53.220	ENSLOCG00000013054	MBD4	69	54.688	Lepisosteus_oculatus
ENSAOCG00000001157	mbd4	62	59.916	ENSMFAG00000002266	MBD4	53	59.916	Macaca_fascicularis
ENSAOCG00000001157	mbd4	62	58.367	ENSMMUG00000012723	MBD4	54	58.367	Macaca_mulatta
ENSAOCG00000001157	mbd4	57	57.944	ENSMNEG00000029752	MBD4	50	57.944	Macaca_nemestrina
ENSAOCG00000001157	mbd4	62	59.494	ENSMLEG00000024859	MBD4	52	59.494	Mandrillus_leucophaeus
ENSAOCG00000001157	mbd4	63	55.663	ENSMAMG00000024084	-	81	55.663	Mastacembelus_armatus
ENSAOCG00000001157	mbd4	95	41.916	ENSMICG00000008022	MBD4	86	41.916	Microcebus_murinus
ENSAOCG00000001157	mbd4	64	60.976	ENSMODG00000006399	-	63	60.976	Monodelphis_domestica
ENSAOCG00000001157	mbd4	100	67.556	ENSMALG00000021517	mbd4	92	67.556	Monopterus_albus
ENSAOCG00000001157	mbd4	95	43.056	MGP_CAROLIEiJ_G0028760	Mbd4	86	42.857	Mus_caroli
ENSAOCG00000001157	mbd4	95	43.320	ENSMUSG00000030322	Mbd4	87	43.117	Mus_musculus
ENSAOCG00000001157	mbd4	95	44.289	MGP_PahariEiJ_G0022511	-	86	44.289	Mus_pahari
ENSAOCG00000001157	mbd4	95	42.915	MGP_SPRETEiJ_G0029788	Mbd4	87	41.897	Mus_spretus
ENSAOCG00000001157	mbd4	62	63.563	ENSMPUG00000017195	MBD4	53	63.563	Mustela_putorius_furo
ENSAOCG00000001157	mbd4	95	42.012	ENSNLEG00000005337	MBD4	85	41.584	Nomascus_leucogenys
ENSAOCG00000001157	mbd4	95	41.700	ENSOPRG00000000473	MBD4	85	42.000	Ochotona_princeps
ENSAOCG00000001157	mbd4	95	67.296	ENSONIG00000017212	mbd4	100	67.296	Oreochromis_niloticus
ENSAOCG00000001157	mbd4	95	38.933	ENSOCUG00000013006	MBD4	86	38.933	Oryctolagus_cuniculus
ENSAOCG00000001157	mbd4	98	58.723	ENSORLG00000011049	mbd4	99	58.723	Oryzias_latipes
ENSAOCG00000001157	mbd4	98	58.936	ENSORLG00020020013	mbd4	99	58.936	Oryzias_latipes_hni
ENSAOCG00000001157	mbd4	98	58.936	ENSORLG00015015342	mbd4	99	58.936	Oryzias_latipes_hsok
ENSAOCG00000001157	mbd4	98	59.110	ENSOMEG00000008819	mbd4	93	59.110	Oryzias_melastigma
ENSAOCG00000001157	mbd4	95	43.064	ENSOGAG00000010236	MBD4	85	42.857	Otolemur_garnettii
ENSAOCG00000001157	mbd4	62	61.694	ENSOARG00000014699	MBD4	55	61.694	Ovis_aries
ENSAOCG00000001157	mbd4	95	42.715	ENSPPAG00000036528	MBD4	85	42.285	Pan_paniscus
ENSAOCG00000001157	mbd4	95	43.673	ENSPPRG00000016480	MBD4	54	63.223	Panthera_pardus
ENSAOCG00000001157	mbd4	95	42.406	ENSPTRG00000015377	MBD4	85	41.980	Pan_troglodytes
ENSAOCG00000001157	mbd4	62	58.848	ENSPANG00000015047	MBD4	53	58.848	Papio_anubis
ENSAOCG00000001157	mbd4	95	48.305	ENSPKIG00000012306	MBD4	75	46.429	Paramormyrops_kingsleyae
ENSAOCG00000001157	mbd4	95	61.778	ENSPFOG00000014471	mbd4	98	61.778	Poecilia_formosa
ENSAOCG00000001157	mbd4	95	41.800	ENSPPYG00000013417	MBD4	85	41.365	Pongo_abelii
ENSAOCG00000001157	mbd4	57	57.870	ENSPCAG00000012915	MBD4	58	52.326	Procavia_capensis
ENSAOCG00000001157	mbd4	62	61.475	ENSRNOG00000010919	Mbd4	53	61.475	Rattus_norvegicus
ENSAOCG00000001157	mbd4	62	59.494	ENSRBIG00000027722	MBD4	52	59.494	Rhinopithecus_bieti
ENSAOCG00000001157	mbd4	62	59.494	ENSRROG00000029136	MBD4	52	59.494	Rhinopithecus_roxellana
ENSAOCG00000001157	mbd4	95	45.208	ENSSFOG00015016292	mbd4	96	45.455	Scleropages_formosus
ENSAOCG00000001157	mbd4	100	67.842	ENSSMAG00000013958	-	71	68.050	Scophthalmus_maximus
ENSAOCG00000001157	mbd4	100	72.234	ENSSDUG00000001365	mbd4	98	72.234	Seriola_dumerili
ENSAOCG00000001157	mbd4	91	66.133	ENSSLDG00000010295	MBD4	86	68.246	Seriola_lalandi_dorsalis
ENSAOCG00000001157	mbd4	100	58.228	ENSTRUG00000010124	mbd4	100	57.263	Takifugu_rubripes
ENSAOCG00000001157	mbd4	95	55.224	ENSTNIG00000017927	mbd4	100	55.224	Tetraodon_nigroviridis
ENSAOCG00000001157	mbd4	95	42.231	ENSTTRG00000011265	MBD4	88	42.231	Tursiops_truncatus
ENSAOCG00000001157	mbd4	95	42.829	ENSUAMG00000000814	MBD4	99	41.165	Ursus_americanus
ENSAOCG00000001157	mbd4	95	44.309	ENSUMAG00000017542	MBD4	86	41.165	Ursus_maritimus
ENSAOCG00000001157	mbd4	95	43.687	ENSVVUG00000014222	MBD4	85	42.713	Vulpes_vulpes
ENSAOCG00000001157	mbd4	98	61.028	ENSXMAG00000021129	mbd4	100	61.028	Xiphophorus_maculatus