EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000001288 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 7726 bases
Position: chrNXFZ01002799.1:74833-82558
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000028465	RNase_Zc3h12a	PF11977.8	8.8e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000021610	-	819	-	ENSAOCP00000028465	272 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000001288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000001288's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000001288	-	94	72.348	ENSAOCG00000003866	-	96	73.846
ENSAOCG00000001288	-	95	56.202	ENSAOCG00000014326	-	95	55.426

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000001288	-	92	60.800	ENSG00000163874	ZC3H12A	80	63.404	Homo_sapiens
ENSAOCG00000001288	-	88	56.667	ENSACIG00000006790	-	90	44.516	Amphilophus_citrinellus
ENSAOCG00000001288	-	85	58.696	ENSACIG00000004135	si:dkey-206d17.12	79	58.696	Amphilophus_citrinellus
ENSAOCG00000001288	-	100	99.632	ENSAPEG00000022263	-	100	99.632	Amphiprion_percula
ENSAOCG00000001288	-	95	56.589	ENSAPEG00000021795	si:dkey-206d17.12	95	55.814	Amphiprion_percula
ENSAOCG00000001288	-	94	72.348	ENSAPEG00000005727	-	94	65.161	Amphiprion_percula
ENSAOCG00000001288	-	98	85.393	ENSATEG00000002260	-	95	87.266	Anabas_testudineus
ENSAOCG00000001288	-	85	58.921	ENSATEG00000006140	si:dkey-206d17.12	86	45.752	Anabas_testudineus
ENSAOCG00000001288	-	84	57.391	ENSATEG00000013053	-	79	54.741	Anabas_testudineus
ENSAOCG00000001288	-	96	61.132	ENSANAG00000009908	ZC3H12A	90	59.848	Aotus_nancymaae
ENSAOCG00000001288	-	86	58.824	ENSAMXG00000029641	si:dkey-206d17.12	76	58.298	Astyanax_mexicanus
ENSAOCG00000001288	-	94	61.154	ENSCATG00000037700	ZC3H12A	88	60.000	Cercocebus_atys
ENSAOCG00000001288	-	91	62.651	ENSCANG00000042287	ZC3H12A	88	59.615	Colobus_angolensis_palliatus
ENSAOCG00000001288	-	85	80.000	ENSCSEG00000010073	-	79	80.687	Cynoglossus_semilaevis
ENSAOCG00000001288	-	95	84.556	ENSCVAG00000016808	-	98	84.170	Cyprinodon_variegatus
ENSAOCG00000001288	-	85	57.576	ENSCVAG00000001077	-	81	55.230	Cyprinodon_variegatus
ENSAOCG00000001288	-	86	58.547	ENSDARG00000005271	zc3h12a	60	58.696	Danio_rerio
ENSAOCG00000001288	-	85	45.652	ENSETEG00000018311	ZC3H12A	50	42.231	Echinops_telfairi
ENSAOCG00000001288	-	86	79.916	ENSFHEG00000021225	-	85	69.620	Fundulus_heteroclitus
ENSAOCG00000001288	-	85	55.172	ENSGACG00000006636	-	69	53.846	Gasterosteus_aculeatus
ENSAOCG00000001288	-	88	55.833	ENSHBUG00000021584	-	87	54.357	Haplochromis_burtoni
ENSAOCG00000001288	-	93	52.874	ENSHCOG00000004255	si:dkey-206d17.12	96	50.598	Hippocampus_comes
ENSAOCG00000001288	-	58	43.949	ENSHCOG00000007306	-	86	39.375	Hippocampus_comes
ENSAOCG00000001288	-	87	76.793	ENSHCOG00000008878	-	58	67.974	Hippocampus_comes
ENSAOCG00000001288	-	91	54.656	ENSKMAG00000002156	ZC3H12A	86	52.918	Kryptolebias_marmoratus
ENSAOCG00000001288	-	96	83.846	ENSKMAG00000013285	-	97	83.077	Kryptolebias_marmoratus
ENSAOCG00000001288	-	85	51.261	ENSLBEG00000012121	-	92	41.615	Labrus_bergylta
ENSAOCG00000001288	-	85	79.412	ENSLBEG00000012554	-	84	70.395	Labrus_bergylta
ENSAOCG00000001288	-	94	61.154	ENSMFAG00000032647	ZC3H12A	88	60.000	Macaca_fascicularis
ENSAOCG00000001288	-	86	64.831	ENSMNEG00000040453	ZC3H12A	88	60.000	Macaca_nemestrina
ENSAOCG00000001288	-	94	61.154	ENSMLEG00000034570	ZC3H12A	88	60.000	Mandrillus_leucophaeus
ENSAOCG00000001288	-	85	57.511	ENSMAMG00000004463	-	83	54.468	Mastacembelus_armatus
ENSAOCG00000001288	-	86	79.916	ENSMAMG00000021794	-	94	70.968	Mastacembelus_armatus
ENSAOCG00000001288	-	97	84.387	ENSMZEG00005019137	-	90	79.618	Maylandia_zebra
ENSAOCG00000001288	-	88	57.676	ENSMZEG00005023410	ZC3H12A	81	57.676	Maylandia_zebra
ENSAOCG00000001288	-	90	55.918	ENSMMOG00000014855	-	89	54.000	Mola_mola
ENSAOCG00000001288	-	90	75.686	ENSMMOG00000005728	-	86	70.470	Mola_mola
ENSAOCG00000001288	-	85	57.202	ENSMMOG00000000727	zc3h12a	85	45.860	Mola_mola
ENSAOCG00000001288	-	94	61.303	MGP_SPRETEiJ_G0027441	Zc3h12a	90	59.770	Mus_spretus
ENSAOCG00000001288	-	97	84.015	ENSNBRG00000012175	-	90	79.618	Neolamprologus_brichardi
ENSAOCG00000001288	-	91	54.297	ENSNBRG00000010961	-	92	52.874	Neolamprologus_brichardi
ENSAOCG00000001288	-	91	61.847	ENSOCUG00000010856	ZC3H12A	61	60.643	Oryctolagus_cuniculus
ENSAOCG00000001288	-	85	58.369	ENSORLG00000009473	ZC3H12A	83	57.203	Oryzias_latipes
ENSAOCG00000001288	-	97	57.401	ENSOARG00000019760	ZC3H12A	62	56.318	Ovis_aries
ENSAOCG00000001288	-	92	61.200	ENSPPAG00000041054	ZC3H12A	84	61.694	Pan_paniscus
ENSAOCG00000001288	-	99	57.500	ENSPTIG00000012943	ZC3H12A	85	60.643	Panthera_tigris_altaica
ENSAOCG00000001288	-	92	61.200	ENSPTRG00000000544	ZC3H12A	84	61.694	Pan_troglodytes
ENSAOCG00000001288	-	94	61.154	ENSPANG00000011821	ZC3H12A	88	60.000	Papio_anubis
ENSAOCG00000001288	-	85	53.680	ENSPKIG00000019720	-	78	51.600	Paramormyrops_kingsleyae
ENSAOCG00000001288	-	85	56.897	ENSPMEG00000009279	-	88	54.008	Poecilia_mexicana
ENSAOCG00000001288	-	96	85.000	ENSPREG00000001607	-	76	86.611	Poecilia_reticulata
ENSAOCG00000001288	-	94	61.154	ENSRROG00000037444	ZC3H12A	88	60.000	Rhinopithecus_roxellana
ENSAOCG00000001288	-	96	87.356	ENSSDUG00000013237	-	91	77.419	Seriola_dumerili
ENSAOCG00000001288	-	86	56.410	ENSSDUG00000010581	-	84	55.983	Seriola_dumerili
ENSAOCG00000001288	-	90	55.294	ENSSLDG00000009317	si:dkey-206d17.12	88	54.762	Seriola_lalandi_dorsalis
ENSAOCG00000001288	-	91	76.000	ENSTNIG00000014519	-	94	75.600	Tetraodon_nigroviridis
ENSAOCG00000001288	-	85	60.426	ENSXCOG00000008984	zc3h12a	90	45.342	Xiphophorus_couchianus
ENSAOCG00000001288	-	85	56.466	ENSXCOG00000001538	-	92	43.293	Xiphophorus_couchianus
ENSAOCG00000001288	-	96	83.462	ENSXMAG00000014715	-	87	85.892	Xiphophorus_maculatus
ENSAOCG00000001288	-	85	56.897	ENSXMAG00000005023	-	92	43.293	Xiphophorus_maculatus