EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000001325 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 1506 bases
Position: chrNXFZ01003140.1:14524-16029
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000013944	zf-C2H2	PF00096.26	1.2e-25	1	5
ENSAOCP00000013944	zf-C2H2	PF00096.26	1.2e-25	2	5
ENSAOCP00000013944	zf-C2H2	PF00096.26	1.2e-25	3	5
ENSAOCP00000013944	zf-C2H2	PF00096.26	1.2e-25	4	5
ENSAOCP00000013944	zf-C2H2	PF00096.26	1.2e-25	5	5
ENSAOCP00000013944	zf-met	PF12874.7	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000022149	-	675	-	ENSAOCP00000013944	224 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000001325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000001325's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000001325	-	83	43.066	ENSAOCG00000013672	-	94	44.030
ENSAOCG00000001325	-	73	43.537	ENSAOCG00000015586	-	84	44.138
ENSAOCG00000001325	-	75	39.726	ENSAOCG00000022283	-	85	39.726
ENSAOCG00000001325	-	77	45.333	ENSAOCG00000018307	-	90	45.333
ENSAOCG00000001325	-	63	40.000	ENSAOCG00000010498	-	56	40.000
ENSAOCG00000001325	-	85	42.069	ENSAOCG00000016737	-	98	42.069
ENSAOCG00000001325	-	71	42.336	ENSAOCG00000000570	-	66	42.336
ENSAOCG00000001325	-	74	39.316	ENSAOCG00000012062	znf646	53	39.316
ENSAOCG00000001325	-	76	40.541	ENSAOCG00000007045	-	82	40.541
ENSAOCG00000001325	-	83	42.149	ENSAOCG00000016088	-	79	42.149
ENSAOCG00000001325	-	75	42.177	ENSAOCG00000013130	-	79	42.177
ENSAOCG00000001325	-	75	41.497	ENSAOCG00000013345	-	50	41.497
ENSAOCG00000001325	-	75	41.497	ENSAOCG00000024767	-	50	41.497
ENSAOCG00000001325	-	65	39.552	ENSAOCG00000017602	-	66	39.552
ENSAOCG00000001325	-	65	40.385	ENSAOCG00000021187	gfi1b	53	40.385
ENSAOCG00000001325	-	63	40.972	ENSAOCG00000007134	-	79	40.972
ENSAOCG00000001325	-	75	37.838	ENSAOCG00000013656	-	65	37.838
ENSAOCG00000001325	-	65	37.162	ENSAOCG00000014806	prdm5	57	37.162
ENSAOCG00000001325	-	66	42.069	ENSAOCG00000017595	-	61	42.069
ENSAOCG00000001325	-	71	39.041	ENSAOCG00000010471	-	67	39.041
ENSAOCG00000001325	-	81	36.806	ENSAOCG00000020624	-	73	37.624
ENSAOCG00000001325	-	74	43.448	ENSAOCG00000016409	-	64	43.448
ENSAOCG00000001325	-	86	48.387	ENSAOCG00000022004	znf236	51	48.387
ENSAOCG00000001325	-	67	43.537	ENSAOCG00000013978	-	87	41.667
ENSAOCG00000001325	-	70	36.306	ENSAOCG00000010954	-	54	36.306
ENSAOCG00000001325	-	63	39.024	ENSAOCG00000007347	-	86	39.024
ENSAOCG00000001325	-	94	30.348	ENSAOCG00000022375	-	90	39.231
ENSAOCG00000001325	-	85	35.333	ENSAOCG00000008304	zbtb48	56	35.333
ENSAOCG00000001325	-	87	41.379	ENSAOCG00000014165	-	86	41.379
ENSAOCG00000001325	-	76	41.379	ENSAOCG00000024281	-	88	41.379
ENSAOCG00000001325	-	84	46.939	ENSAOCG00000013578	-	74	46.939
ENSAOCG00000001325	-	75	41.772	ENSAOCG00000020830	-	95	41.772
ENSAOCG00000001325	-	77	39.216	ENSAOCG00000019475	-	65	49.296
ENSAOCG00000001325	-	73	42.727	ENSAOCG00000006793	-	83	42.727
ENSAOCG00000001325	-	71	35.802	ENSAOCG00000001327	-	84	35.802
ENSAOCG00000001325	-	63	42.202	ENSAOCG00000012829	-	50	42.202
ENSAOCG00000001325	-	59	37.615	ENSAOCG00000005965	-	63	37.615
ENSAOCG00000001325	-	67	43.590	ENSAOCG00000014651	-	51	43.590
ENSAOCG00000001325	-	75	37.313	ENSAOCG00000004559	-	87	37.313
ENSAOCG00000001325	-	86	42.342	ENSAOCG00000009970	-	61	42.342
ENSAOCG00000001325	-	52	38.710	ENSAOCG00000024256	-	95	38.710
ENSAOCG00000001325	-	94	39.378	ENSAOCG00000012653	-	82	39.706
ENSAOCG00000001325	-	69	39.333	ENSAOCG00000002795	-	65	39.333
ENSAOCG00000001325	-	69	37.363	ENSAOCG00000003910	scrt1b	53	37.363
ENSAOCG00000001325	-	85	40.667	ENSAOCG00000016287	-	84	40.667
ENSAOCG00000001325	-	84	40.594	ENSAOCG00000012813	-	63	40.594
ENSAOCG00000001325	-	87	40.476	ENSAOCG00000016905	-	68	40.476
ENSAOCG00000001325	-	72	34.307	ENSAOCG00000014818	znf319b	81	34.307
ENSAOCG00000001325	-	83	45.333	ENSAOCG00000018484	-	90	46.000
ENSAOCG00000001325	-	65	42.553	ENSAOCG00000006744	-	83	39.286
ENSAOCG00000001325	-	80	40.000	ENSAOCG00000013934	-	56	40.000
ENSAOCG00000001325	-	75	41.525	ENSAOCG00000000448	-	95	41.525
ENSAOCG00000001325	-	75	36.496	ENSAOCG00000003494	si:dkey-7i4.5	89	36.496
ENSAOCG00000001325	-	76	38.621	ENSAOCG00000001615	-	80	38.621
ENSAOCG00000001325	-	66	44.138	ENSAOCG00000022459	-	88	44.138
ENSAOCG00000001325	-	65	40.816	ENSAOCG00000018579	-	57	40.816
ENSAOCG00000001325	-	63	37.405	ENSAOCG00000017968	snai2	52	37.405
ENSAOCG00000001325	-	73	37.415	ENSAOCG00000001341	-	92	37.415
ENSAOCG00000001325	-	67	44.444	ENSAOCG00000003277	-	93	45.763
ENSAOCG00000001325	-	67	42.466	ENSAOCG00000002585	-	68	42.466
ENSAOCG00000001325	-	72	39.456	ENSAOCG00000022079	-	76	39.456
ENSAOCG00000001325	-	74	35.176	ENSAOCG00000004564	-	85	38.000
ENSAOCG00000001325	-	85	41.228	ENSAOCG00000013124	-	64	41.228
ENSAOCG00000001325	-	77	40.299	ENSAOCG00000016897	-	63	40.299
ENSAOCG00000001325	-	73	44.138	ENSAOCG00000013710	-	86	44.138
ENSAOCG00000001325	-	92	42.282	ENSAOCG00000015369	-	100	41.818
ENSAOCG00000001325	-	65	44.667	ENSAOCG00000022276	-	97	44.667
ENSAOCG00000001325	-	85	44.828	ENSAOCG00000018543	-	88	44.828
ENSAOCG00000001325	-	64	39.552	ENSAOCG00000002430	-	71	39.552
ENSAOCG00000001325	-	66	38.462	ENSAOCG00000013589	-	88	38.462
ENSAOCG00000001325	-	50	38.000	ENSAOCG00000019753	-	63	38.000
ENSAOCG00000001325	-	77	33.793	ENSAOCG00000005450	ZNF319	88	33.793
ENSAOCG00000001325	-	66	43.448	ENSAOCG00000000655	-	53	43.448
ENSAOCG00000001325	-	81	34.228	ENSAOCG00000015987	-	69	34.228
ENSAOCG00000001325	-	71	40.816	ENSAOCG00000012903	-	84	40.816
ENSAOCG00000001325	-	84	45.638	ENSAOCG00000022675	-	93	45.638
ENSAOCG00000001325	-	86	36.601	ENSAOCG00000007388	-	62	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000001325	-	67	41.667	ENSAPOG00000019138	-	54	41.667	Acanthochromis_polyacanthus
ENSAOCG00000001325	-	71	42.000	ENSAPOG00000012437	-	89	42.000	Acanthochromis_polyacanthus
ENSAOCG00000001325	-	66	35.484	ENSACIG00000017892	-	78	35.484	Amphilophus_citrinellus
ENSAOCG00000001325	-	65	45.000	ENSACIG00000004641	-	52	45.000	Amphilophus_citrinellus
ENSAOCG00000001325	-	64	35.772	ENSACIG00000002944	-	77	35.772	Amphilophus_citrinellus
ENSAOCG00000001325	-	71	40.000	ENSAPEG00000001556	-	63	40.000	Amphiprion_percula
ENSAOCG00000001325	-	75	36.054	ENSAPEG00000010013	-	55	36.054	Amphiprion_percula
ENSAOCG00000001325	-	68	35.766	ENSAPEG00000015714	-	72	35.766	Amphiprion_percula
ENSAOCG00000001325	-	92	49.758	ENSATEG00000018931	-	87	49.107	Anabas_testudineus
ENSAOCG00000001325	-	72	42.857	ENSACLG00000011658	-	96	39.535	Astatotilapia_calliptera
ENSAOCG00000001325	-	63	42.857	ENSAMXG00000029518	-	52	42.857	Astyanax_mexicanus
ENSAOCG00000001325	-	66	42.553	ENSCING00000002128	zf(c2h2)-35	62	42.553	Ciona_intestinalis
ENSAOCG00000001325	-	65	36.290	ENSCSEG00000010264	-	60	36.290	Cynoglossus_semilaevis
ENSAOCG00000001325	-	75	37.288	ENSCSEG00000015593	-	97	35.897	Cynoglossus_semilaevis
ENSAOCG00000001325	-	66	46.939	ENSCSEG00000010453	-	54	46.939	Cynoglossus_semilaevis
ENSAOCG00000001325	-	84	38.400	ENSCVAG00000006653	-	65	38.400	Cyprinodon_variegatus
ENSAOCG00000001325	-	63	41.379	ENSCVAG00000015616	-	76	41.379	Cyprinodon_variegatus
ENSAOCG00000001325	-	62	45.652	ENSCVAG00000012682	-	67	45.652	Cyprinodon_variegatus
ENSAOCG00000001325	-	75	57.436	ENSCVAG00000003250	-	72	57.823	Cyprinodon_variegatus
ENSAOCG00000001325	-	63	42.553	ENSCVAG00000020141	-	64	42.553	Cyprinodon_variegatus
ENSAOCG00000001325	-	69	41.441	ENSEBUG00000007931	-	63	41.441	Eptatretus_burgeri
ENSAOCG00000001325	-	77	38.406	ENSELUG00000001909	-	82	34.746	Esox_lucius
ENSAOCG00000001325	-	84	42.857	ENSELUG00000024007	-	58	42.857	Esox_lucius
ENSAOCG00000001325	-	72	37.500	ENSFHEG00000023184	-	55	37.500	Fundulus_heteroclitus
ENSAOCG00000001325	-	87	40.816	ENSGAFG00000008204	-	73	40.816	Gambusia_affinis
ENSAOCG00000001325	-	70	45.055	ENSGAFG00000001879	-	63	45.055	Gambusia_affinis
ENSAOCG00000001325	-	73	34.320	ENSHBUG00000006656	-	59	36.090	Haplochromis_burtoni
ENSAOCG00000001325	-	75	45.517	ENSHCOG00000008550	-	63	45.517	Hippocampus_comes
ENSAOCG00000001325	-	81	38.095	ENSHCOG00000008227	-	54	38.095	Hippocampus_comes
ENSAOCG00000001325	-	75	45.517	ENSHCOG00000001873	-	63	45.517	Hippocampus_comes
ENSAOCG00000001325	-	72	40.690	ENSHCOG00000013489	-	89	44.521	Hippocampus_comes
ENSAOCG00000001325	-	63	50.602	ENSHCOG00000015497	-	75	50.602	Hippocampus_comes
ENSAOCG00000001325	-	66	39.000	ENSHCOG00000020670	-	81	39.000	Hippocampus_comes
ENSAOCG00000001325	-	81	36.607	ENSKMAG00000014184	-	56	36.975	Kryptolebias_marmoratus
ENSAOCG00000001325	-	70	35.593	ENSKMAG00000007699	-	64	36.264	Kryptolebias_marmoratus
ENSAOCG00000001325	-	63	44.898	ENSLBEG00000017424	-	95	44.898	Labrus_bergylta
ENSAOCG00000001325	-	63	44.056	ENSLBEG00000011210	-	51	44.056	Labrus_bergylta
ENSAOCG00000001325	-	87	51.724	ENSLBEG00000001132	-	72	55.782	Labrus_bergylta
ENSAOCG00000001325	-	76	38.235	ENSLBEG00000006161	-	79	38.235	Labrus_bergylta
ENSAOCG00000001325	-	73	37.126	ENSLBEG00000007106	-	67	37.126	Labrus_bergylta
ENSAOCG00000001325	-	76	39.597	ENSLOCG00000004208	-	99	39.597	Lepisosteus_oculatus
ENSAOCG00000001325	-	85	59.574	ENSMAMG00000017939	-	83	59.538	Mastacembelus_armatus
ENSAOCG00000001325	-	75	32.353	ENSMZEG00005013907	-	81	32.353	Maylandia_zebra
ENSAOCG00000001325	-	63	42.254	ENSMMOG00000013330	-	61	42.254	Mola_mola
ENSAOCG00000001325	-	91	55.665	ENSMALG00000004279	-	80	51.724	Monopterus_albus
ENSAOCG00000001325	-	64	37.895	ENSONIG00000005050	-	86	37.895	Oreochromis_niloticus
ENSAOCG00000001325	-	79	40.171	ENSONIG00000007967	-	54	40.171	Oreochromis_niloticus
ENSAOCG00000001325	-	88	36.025	ENSORLG00000021885	-	70	36.025	Oryzias_latipes
ENSAOCG00000001325	-	80	34.694	ENSORLG00000002268	-	90	33.918	Oryzias_latipes
ENSAOCG00000001325	-	66	37.692	ENSORLG00020018921	-	70	36.986	Oryzias_latipes_hni
ENSAOCG00000001325	-	63	36.842	ENSORLG00015018099	-	70	36.842	Oryzias_latipes_hsok
ENSAOCG00000001325	-	65	40.426	ENSOMEG00000005578	-	66	40.426	Oryzias_melastigma
ENSAOCG00000001325	-	91	30.417	ENSPMGG00000006928	-	59	32.075	Periophthalmus_magnuspinnatus
ENSAOCG00000001325	-	66	34.783	ENSPMGG00000019750	-	77	34.783	Periophthalmus_magnuspinnatus
ENSAOCG00000001325	-	66	40.411	ENSPMGG00000009571	-	73	40.566	Periophthalmus_magnuspinnatus
ENSAOCG00000001325	-	69	40.000	ENSPMGG00000002455	-	96	40.000	Periophthalmus_magnuspinnatus
ENSAOCG00000001325	-	75	45.283	ENSPMGG00000002661	-	64	45.283	Periophthalmus_magnuspinnatus
ENSAOCG00000001325	-	67	40.278	ENSPMGG00000007051	-	50	39.252	Periophthalmus_magnuspinnatus
ENSAOCG00000001325	-	66	43.697	ENSPMGG00000002659	-	68	43.697	Periophthalmus_magnuspinnatus
ENSAOCG00000001325	-	63	32.847	ENSPMAG00000004189	-	97	32.847	Petromyzon_marinus
ENSAOCG00000001325	-	67	38.462	ENSPMAG00000000839	-	90	38.462	Petromyzon_marinus
ENSAOCG00000001325	-	75	38.136	ENSPMAG00000002022	-	98	38.136	Petromyzon_marinus
ENSAOCG00000001325	-	80	61.143	ENSPFOG00000018860	-	93	58.503	Poecilia_formosa
ENSAOCG00000001325	-	74	41.481	ENSPFOG00000009491	-	56	41.481	Poecilia_formosa
ENSAOCG00000001325	-	79	42.537	ENSPLAG00000010067	-	74	43.802	Poecilia_latipinna
ENSAOCG00000001325	-	76	54.802	ENSPLAG00000014832	-	90	54.802	Poecilia_latipinna
ENSAOCG00000001325	-	77	55.502	ENSPLAG00000008941	-	92	58.503	Poecilia_latipinna
ENSAOCG00000001325	-	76	54.802	ENSPMEG00000005210	-	90	54.802	Poecilia_mexicana
ENSAOCG00000001325	-	74	32.335	ENSPMEG00000002953	-	61	32.335	Poecilia_mexicana
ENSAOCG00000001325	-	74	41.481	ENSPMEG00000024117	-	56	41.481	Poecilia_mexicana
ENSAOCG00000001325	-	63	40.506	ENSPREG00000002603	-	58	40.506	Poecilia_reticulata
ENSAOCG00000001325	-	63	42.593	ENSPREG00000009488	-	90	41.538	Poecilia_reticulata
ENSAOCG00000001325	-	68	40.541	ENSPNYG00000017888	-	50	34.940	Pundamilia_nyererei
ENSAOCG00000001325	-	80	37.097	ENSPNAG00000005946	-	98	37.097	Pygocentrus_nattereri
ENSAOCG00000001325	-	76	35.714	ENSSFOG00015011531	-	77	38.571	Scleropages_formosus
ENSAOCG00000001325	-	86	37.748	ENSSMAG00000013291	-	93	37.589	Scophthalmus_maximus
ENSAOCG00000001325	-	66	44.643	ENSSMAG00000004259	-	57	44.643	Scophthalmus_maximus
ENSAOCG00000001325	-	83	32.738	ENSSLDG00000014436	-	78	32.738	Seriola_lalandi_dorsalis
ENSAOCG00000001325	-	78	32.402	ENSSPAG00000011533	-	97	32.402	Stegastes_partitus
ENSAOCG00000001325	-	85	33.835	ENSSPAG00000011544	-	52	37.931	Stegastes_partitus
ENSAOCG00000001325	-	66	38.514	ENSXETG00000012506	znf91	99	38.514	Xenopus_tropicalis
ENSAOCG00000001325	-	70	46.988	ENSXCOG00000020768	-	77	46.988	Xiphophorus_couchianus
ENSAOCG00000001325	-	63	37.634	ENSXCOG00000000254	-	65	37.634	Xiphophorus_couchianus
ENSAOCG00000001325	-	78	37.895	ENSXCOG00000003441	-	66	37.895	Xiphophorus_couchianus
ENSAOCG00000001325	-	74	56.069	ENSXMAG00000012936	-	87	56.069	Xiphophorus_maculatus