EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000001605 (Gene tree)
Gene ID: 111569235
Gene Symbol: -
Alias: -
Full Name: RALY RNA binding protein like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 111275 bases
Position: chrNXFZ01000341.1:234639-345913
Accession: 111569235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000030822	RRM_1	PF00076.22	1.6e-11	1	1
ENSAOCP00000017011	RRM_1	PF00076.22	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000032535	-	4796	XM_023271293	ENSAOCP00000030822	292 (aa)	XP_023127061	-
ENSAOCT00000026160	-	4676	XM_023271263	ENSAOCP00000017011	299 (aa)	XP_023127031	UPI000C3195A2

Gene Model

Click here to download ENSAOCG00000001605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000001605's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000001605	-	75	56.889	ENSAOCG00000021616	-	70	60.909
ENSAOCG00000001605	-	100	73.986	ENSAOCG00000023599	-	100	73.986
ENSAOCG00000001605	-	75	59.031	ENSAOCG00000003896	-	70	59.389
ENSAOCG00000001605	-	85	56.627	ENSAOCG00000009883	raly	84	51.220

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000001605	-	100	73.311	ENSAPOG00000008744	-	100	73.311	Acanthochromis_polyacanthus
ENSAOCG00000001605	-	97	67.354	ENSACIG00000007143	-	97	67.354	Amphilophus_citrinellus
ENSAOCG00000001605	-	97	66.779	ENSATEG00000022219	-	93	70.805	Anabas_testudineus
ENSAOCG00000001605	-	77	95.111	ENSATEG00000023356	-	87	95.111	Anabas_testudineus
ENSAOCG00000001605	-	100	95.904	ENSACLG00000006949	-	100	94.881	Astatotilapia_calliptera
ENSAOCG00000001605	-	100	74.237	ENSACLG00000011720	-	100	74.237	Astatotilapia_calliptera
ENSAOCG00000001605	-	100	88.699	ENSAMXG00000019031	-	100	88.699	Astyanax_mexicanus
ENSAOCG00000001605	-	100	65.320	ENSAMXG00000032617	-	100	65.320	Astyanax_mexicanus
ENSAOCG00000001605	-	100	68.243	ENSCSEG00000014237	-	100	67.905	Cynoglossus_semilaevis
ENSAOCG00000001605	-	100	93.515	ENSCVAG00000018104	-	100	94.539	Cyprinodon_variegatus
ENSAOCG00000001605	-	100	72.973	ENSCVAG00000013624	-	100	72.973	Cyprinodon_variegatus
ENSAOCG00000001605	-	59	75.439	ENSDARG00000090292	ralyl	81	77.160	Danio_rerio
ENSAOCG00000001605	-	94	73.835	ENSELUG00000001702	-	97	75.627	Esox_lucius
ENSAOCG00000001605	-	57	76.970	ENSGMOG00000005914	-	100	76.970	Gadus_morhua
ENSAOCG00000001605	-	59	91.908	ENSGACG00000004991	-	91	93.976	Gasterosteus_aculeatus
ENSAOCG00000001605	-	100	95.904	ENSHBUG00000015412	-	100	94.881	Haplochromis_burtoni
ENSAOCG00000001605	-	100	73.986	ENSHBUG00000010040	-	100	73.986	Haplochromis_burtoni
ENSAOCG00000001605	-	100	89.041	ENSIPUG00000000507	ralyl	100	89.041	Ictalurus_punctatus
ENSAOCG00000001605	-	100	70.608	ENSKMAG00000022093	-	100	72.297	Kryptolebias_marmoratus
ENSAOCG00000001605	-	100	95.890	ENSKMAG00000018155	-	100	95.890	Kryptolebias_marmoratus
ENSAOCG00000001605	-	100	72.973	ENSLBEG00000012873	-	100	72.635	Labrus_bergylta
ENSAOCG00000001605	-	100	92.491	ENSLBEG00000011011	-	100	92.833	Labrus_bergylta
ENSAOCG00000001605	-	100	82.877	ENSLOCG00000012787	ralyl	99	82.534	Lepisosteus_oculatus
ENSAOCG00000001605	-	99	70.000	ENSMAMG00000001723	-	97	70.000	Mastacembelus_armatus
ENSAOCG00000001605	-	98	91.753	ENSMZEG00005018748	-	99	90.722	Maylandia_zebra
ENSAOCG00000001605	-	100	74.237	ENSMZEG00005024447	-	100	74.237	Maylandia_zebra
ENSAOCG00000001605	-	97	67.000	ENSMMOG00000020441	-	86	68.000	Mola_mola
ENSAOCG00000001605	-	100	74.324	ENSMALG00000019019	-	79	74.411	Monopterus_albus
ENSAOCG00000001605	-	100	94.863	ENSMALG00000012952	-	100	94.863	Monopterus_albus
ENSAOCG00000001605	-	98	92.784	ENSNBRG00000011376	-	99	92.784	Neolamprologus_brichardi
ENSAOCG00000001605	-	97	68.041	ENSNBRG00000011206	-	97	68.041	Neolamprologus_brichardi
ENSAOCG00000001605	-	100	73.311	ENSORLG00000017934	-	100	71.622	Oryzias_latipes
ENSAOCG00000001605	-	100	96.575	ENSORLG00000012719	-	100	96.575	Oryzias_latipes
ENSAOCG00000001605	-	100	96.575	ENSORLG00020004438	-	100	96.575	Oryzias_latipes_hni
ENSAOCG00000001605	-	100	71.622	ENSORLG00020000082	-	100	70.946	Oryzias_latipes_hni
ENSAOCG00000001605	-	100	73.311	ENSORLG00015004280	-	100	71.622	Oryzias_latipes_hsok
ENSAOCG00000001605	-	100	96.575	ENSORLG00015004727	-	100	96.575	Oryzias_latipes_hsok
ENSAOCG00000001605	-	100	97.603	ENSOMEG00000001170	-	100	97.603	Oryzias_melastigma
ENSAOCG00000001605	-	100	72.973	ENSOMEG00000011821	-	100	71.284	Oryzias_melastigma
ENSAOCG00000001605	-	100	79.863	ENSPKIG00000015926	-	100	79.863	Paramormyrops_kingsleyae
ENSAOCG00000001605	-	80	81.857	ENSPMGG00000014481	-	98	80.591	Periophthalmus_magnuspinnatus
ENSAOCG00000001605	-	99	66.892	ENSPMGG00000009532	-	99	66.892	Periophthalmus_magnuspinnatus
ENSAOCG00000001605	-	97	70.470	ENSPFOG00000006120	-	99	70.470	Poecilia_formosa
ENSAOCG00000001605	-	97	96.503	ENSPLAG00000011323	ralyl	100	96.503	Poecilia_latipinna
ENSAOCG00000001605	-	97	66.319	ENSPLAG00000009877	-	76	65.862	Poecilia_latipinna
ENSAOCG00000001605	-	97	96.503	ENSPMEG00000023847	ralyl	100	96.503	Poecilia_mexicana
ENSAOCG00000001605	-	97	66.319	ENSPMEG00000013624	-	80	65.862	Poecilia_mexicana
ENSAOCG00000001605	-	97	73.171	ENSPREG00000013805	-	100	68.038	Poecilia_reticulata
ENSAOCG00000001605	-	97	94.406	ENSPREG00000001956	ralyl	100	94.406	Poecilia_reticulata
ENSAOCG00000001605	-	97	68.041	ENSPNYG00000008772	-	97	68.041	Pundamilia_nyererei
ENSAOCG00000001605	-	98	91.753	ENSPNYG00000003548	-	99	90.722	Pundamilia_nyererei
ENSAOCG00000001605	-	100	67.918	ENSPNAG00000026098	-	100	67.123	Pygocentrus_nattereri
ENSAOCG00000001605	-	100	89.384	ENSPNAG00000000498	-	90	87.919	Pygocentrus_nattereri
ENSAOCG00000001605	-	100	89.796	ENSSFOG00015009401	-	100	88.095	Scleropages_formosus
ENSAOCG00000001605	-	100	69.178	ENSSFOG00015004575	-	96	75.265	Scleropages_formosus
ENSAOCG00000001605	-	97	70.877	ENSSMAG00000015907	-	93	70.877	Scophthalmus_maximus
ENSAOCG00000001605	-	100	94.178	ENSSMAG00000005608	-	100	94.178	Scophthalmus_maximus
ENSAOCG00000001605	-	100	73.986	ENSSDUG00000012473	-	100	73.986	Seriola_dumerili
ENSAOCG00000001605	-	100	97.260	ENSSDUG00000007587	-	100	97.260	Seriola_dumerili
ENSAOCG00000001605	-	100	96.587	ENSSLDG00000020603	-	100	96.587	Seriola_lalandi_dorsalis
ENSAOCG00000001605	-	100	73.649	ENSSLDG00000011534	-	100	73.649	Seriola_lalandi_dorsalis
ENSAOCG00000001605	-	97	64.311	ENSSPAG00000013858	-	96	62.671	Stegastes_partitus
ENSAOCG00000001605	-	82	75.732	ENSTRUG00000003829	-	95	71.378	Takifugu_rubripes
ENSAOCG00000001605	-	97	68.027	ENSTNIG00000005594	-	99	68.027	Tetraodon_nigroviridis
ENSAOCG00000001605	-	100	70.408	ENSXETG00000017729	ralyl	99	71.429	Xenopus_tropicalis
ENSAOCG00000001605	-	97	93.537	ENSXCOG00000015156	-	93	93.537	Xiphophorus_couchianus
ENSAOCG00000001605	-	100	73.986	ENSXMAG00000007614	-	100	73.986	Xiphophorus_maculatus
ENSAOCG00000001605	-	100	97.603	ENSXMAG00000008396	-	100	97.603	Xiphophorus_maculatus