EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000001659 (Gene tree)
Gene ID: 111582688
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 9558 bases
Position: chrNXFZ01003937.1:35996-45553
Accession: 111582688
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000031326	RRM_5	PF13893.6	8.4e-11	1	2
ENSAOCP00000031326	RRM_5	PF13893.6	8.4e-11	2	2
ENSAOCP00000017805	RRM_5	PF13893.6	9.1e-11	1	2
ENSAOCP00000017805	RRM_5	PF13893.6	9.1e-11	2	2
ENSAOCP00000031326	RRM_1	PF00076.22	7e-34	1	2
ENSAOCP00000031326	RRM_1	PF00076.22	7e-34	2	2
ENSAOCP00000017805	RRM_1	PF00076.22	7.9e-34	1	2
ENSAOCP00000017805	RRM_1	PF00076.22	7.9e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000027192	-	2578	XM_023291513	ENSAOCP00000031326	519 (aa)	XP_023147281	UPI000C3005F1
ENSAOCT00000027201	-	1626	XM_023291509	ENSAOCP00000017805	541 (aa)	XP_023147277	-

Gene Model

Click here to download ENSAOCG00000001659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000001659's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000001659	-	74	63.441	ENSAOCG00000008941	rbm14b	82	56.642

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000001659	-	74	63.177	ENSAPOG00000021712	rbm14b	71	63.273	Acanthochromis_polyacanthus
ENSAOCG00000001659	-	100	98.084	ENSAPOG00000003380	-	100	98.084	Acanthochromis_polyacanthus
ENSAOCG00000001659	-	100	90.038	ENSACIG00000021173	-	99	89.945	Amphilophus_citrinellus
ENSAOCG00000001659	-	74	63.082	ENSACIG00000000381	rbm14b	68	63.082	Amphilophus_citrinellus
ENSAOCG00000001659	-	74	63.441	ENSAPEG00000003161	rbm14b	82	56.140	Amphiprion_percula
ENSAOCG00000001659	-	100	99.807	ENSAPEG00000016988	-	100	99.807	Amphiprion_percula
ENSAOCG00000001659	-	99	91.985	ENSATEG00000009700	-	97	91.985	Anabas_testudineus
ENSAOCG00000001659	-	74	62.366	ENSATEG00000003034	rbm14b	78	58.942	Anabas_testudineus
ENSAOCG00000001659	-	100	90.200	ENSACLG00000009112	-	97	90.381	Astatotilapia_calliptera
ENSAOCG00000001659	-	74	49.380	ENSACLG00000014355	rbm14b	80	49.587	Astatotilapia_calliptera
ENSAOCG00000001659	-	74	62.406	ENSAMXG00000007233	rbm14a	83	62.406	Astyanax_mexicanus
ENSAOCG00000001659	-	71	60.417	ENSAMXG00000031225	rbm14b	86	48.608	Astyanax_mexicanus
ENSAOCG00000001659	-	69	54.808	ENSCSEG00000000357	rbm14b	81	53.741	Cynoglossus_semilaevis
ENSAOCG00000001659	-	100	85.636	ENSCSEG00000019690	-	100	85.818	Cynoglossus_semilaevis
ENSAOCG00000001659	-	74	49.792	ENSCVAG00000013776	rbm14b	84	49.792	Cyprinodon_variegatus
ENSAOCG00000001659	-	99	86.642	ENSCVAG00000014858	-	100	85.740	Cyprinodon_variegatus
ENSAOCG00000001659	-	69	61.538	ENSDARG00000103834	rbm14b	81	48.401	Danio_rerio
ENSAOCG00000001659	-	74	60.459	ENSDARG00000012723	rbm14a	80	60.358	Danio_rerio
ENSAOCG00000001659	-	71	62.191	ENSELUG00000004690	rbm14b	73	62.324	Esox_lucius
ENSAOCG00000001659	-	89	57.968	ENSELUG00000023633	rbm14a	95	57.171	Esox_lucius
ENSAOCG00000001659	-	99	84.981	ENSFHEG00000020913	-	100	84.659	Fundulus_heteroclitus
ENSAOCG00000001659	-	74	50.000	ENSFHEG00000021265	rbm14b	83	50.833	Fundulus_heteroclitus
ENSAOCG00000001659	-	73	80.628	ENSGMOG00000010840	-	79	80.628	Gadus_morhua
ENSAOCG00000001659	-	74	61.458	ENSGAFG00000001924	rbm14b	83	47.510	Gambusia_affinis
ENSAOCG00000001659	-	99	85.714	ENSGAFG00000004455	-	99	87.189	Gambusia_affinis
ENSAOCG00000001659	-	88	90.393	ENSGACG00000020440	-	95	90.570	Gasterosteus_aculeatus
ENSAOCG00000001659	-	100	90.200	ENSHBUG00000003665	-	97	90.381	Haplochromis_burtoni
ENSAOCG00000001659	-	74	49.380	ENSHBUG00000016754	rbm14b	80	49.587	Haplochromis_burtoni
ENSAOCG00000001659	-	99	77.570	ENSHCOG00000004071	-	100	78.236	Hippocampus_comes
ENSAOCG00000001659	-	79	54.481	ENSHCOG00000012571	rbm14b	99	67.500	Hippocampus_comes
ENSAOCG00000001659	-	69	59.932	ENSIPUG00000009089	rbm14b	86	48.608	Ictalurus_punctatus
ENSAOCG00000001659	-	74	55.663	ENSIPUG00000021256	rbm14a	83	55.904	Ictalurus_punctatus
ENSAOCG00000001659	-	74	62.724	ENSKMAG00000020444	rbm14b	68	62.909	Kryptolebias_marmoratus
ENSAOCG00000001659	-	100	86.372	ENSKMAG00000008514	-	100	86.756	Kryptolebias_marmoratus
ENSAOCG00000001659	-	74	63.082	ENSLBEG00000027934	rbm14b	63	63.214	Labrus_bergylta
ENSAOCG00000001659	-	100	88.603	ENSLBEG00000001217	-	100	88.603	Labrus_bergylta
ENSAOCG00000001659	-	100	88.628	ENSMAMG00000021313	-	100	88.628	Mastacembelus_armatus
ENSAOCG00000001659	-	73	63.004	ENSMAMG00000014394	rbm14b	64	63.197	Mastacembelus_armatus
ENSAOCG00000001659	-	74	49.380	ENSMZEG00005020834	rbm14b	82	49.587	Maylandia_zebra
ENSAOCG00000001659	-	100	90.200	ENSMZEG00005001201	-	100	90.381	Maylandia_zebra
ENSAOCG00000001659	-	100	87.477	ENSMMOG00000014501	-	99	87.845	Mola_mola
ENSAOCG00000001659	-	74	58.065	ENSMMOG00000012912	rbm14b	72	58.214	Mola_mola
ENSAOCG00000001659	-	69	57.937	ENSMALG00000015445	rbm14b	82	58.824	Monopterus_albus
ENSAOCG00000001659	-	74	49.380	ENSNBRG00000003378	rbm14b	82	49.587	Neolamprologus_brichardi
ENSAOCG00000001659	-	99	90.962	ENSNBRG00000004960	-	99	90.642	Neolamprologus_brichardi
ENSAOCG00000001659	-	100	78.198	ENSONIG00000008557	-	94	89.700	Oreochromis_niloticus
ENSAOCG00000001659	-	69	59.416	ENSONIG00000013035	rbm14b	82	58.942	Oreochromis_niloticus
ENSAOCG00000001659	-	100	87.614	ENSORLG00000001900	-	100	87.356	Oryzias_latipes
ENSAOCG00000001659	-	74	50.520	ENSORLG00000008051	rbm14b	83	50.104	Oryzias_latipes
ENSAOCG00000001659	-	100	87.614	ENSORLG00020019144	-	100	87.356	Oryzias_latipes_hni
ENSAOCG00000001659	-	74	49.792	ENSORLG00020005551	rbm14b	80	49.375	Oryzias_latipes_hni
ENSAOCG00000001659	-	74	50.312	ENSORLG00015022683	rbm14b	83	49.896	Oryzias_latipes_hsok
ENSAOCG00000001659	-	100	87.614	ENSORLG00015000082	-	100	87.614	Oryzias_latipes_hsok
ENSAOCG00000001659	-	79	89.264	ENSOMEG00000006508	-	96	92.667	Oryzias_melastigma
ENSAOCG00000001659	-	73	56.234	ENSOMEG00000000910	rbm14b	78	56.997	Oryzias_melastigma
ENSAOCG00000001659	-	73	52.402	ENSPKIG00000009078	rbm14b	86	52.484	Paramormyrops_kingsleyae
ENSAOCG00000001659	-	80	80.430	ENSPMGG00000018869	-	94	87.333	Periophthalmus_magnuspinnatus
ENSAOCG00000001659	-	74	60.943	ENSPMGG00000013064	rbm14b	69	61.092	Periophthalmus_magnuspinnatus
ENSAOCG00000001659	-	99	85.660	ENSPFOG00000004843	-	99	86.424	Poecilia_formosa
ENSAOCG00000001659	-	74	49.585	ENSPFOG00000003614	rbm14b	83	50.207	Poecilia_formosa
ENSAOCG00000001659	-	74	48.340	ENSPLAG00000001395	rbm14b	83	48.755	Poecilia_latipinna
ENSAOCG00000001659	-	99	85.660	ENSPLAG00000017359	-	99	86.424	Poecilia_latipinna
ENSAOCG00000001659	-	74	48.755	ENSPMEG00000012911	rbm14b	83	49.170	Poecilia_mexicana
ENSAOCG00000001659	-	100	85.714	ENSPMEG00000004894	-	100	85.895	Poecilia_mexicana
ENSAOCG00000001659	-	74	47.925	ENSPREG00000003013	rbm14b	83	48.755	Poecilia_reticulata
ENSAOCG00000001659	-	99	86.233	ENSPREG00000007274	-	99	86.807	Poecilia_reticulata
ENSAOCG00000001659	-	100	90.200	ENSPNYG00000015906	-	100	90.381	Pundamilia_nyererei
ENSAOCG00000001659	-	74	49.587	ENSPNYG00000023605	rbm14b	82	49.793	Pundamilia_nyererei
ENSAOCG00000001659	-	74	59.179	ENSPNAG00000012473	rbm14a	85	59.472	Pygocentrus_nattereri
ENSAOCG00000001659	-	71	60.690	ENSPNAG00000001977	rbm14b	52	60.764	Pygocentrus_nattereri
ENSAOCG00000001659	-	70	52.144	ENSSFOG00015023796	rbm14b	85	50.866	Scleropages_formosus
ENSAOCG00000001659	-	69	62.290	ENSSMAG00000004522	rbm14b	82	62.290	Scophthalmus_maximus
ENSAOCG00000001659	-	100	90.944	ENSSMAG00000002055	-	99	91.360	Scophthalmus_maximus
ENSAOCG00000001659	-	100	90.614	ENSSDUG00000020756	-	99	92.557	Seriola_dumerili
ENSAOCG00000001659	-	74	60.943	ENSSDUG00000007975	rbm14b	76	63.082	Seriola_dumerili
ENSAOCG00000001659	-	74	60.943	ENSSLDG00000006472	rbm14b	76	63.082	Seriola_lalandi_dorsalis
ENSAOCG00000001659	-	100	90.126	ENSSLDG00000006311	-	100	91.023	Seriola_lalandi_dorsalis
ENSAOCG00000001659	-	74	63.082	ENSSPAG00000004231	rbm14b	67	63.273	Stegastes_partitus
ENSAOCG00000001659	-	100	96.929	ENSSPAG00000010825	-	99	95.971	Stegastes_partitus
ENSAOCG00000001659	-	74	63.082	ENSTRUG00000005716	rbm14b	70	63.214	Takifugu_rubripes
ENSAOCG00000001659	-	99	80.998	ENSTRUG00000009504	-	93	80.998	Takifugu_rubripes
ENSAOCG00000001659	-	92	78.043	ENSTNIG00000000058	-	100	78.261	Tetraodon_nigroviridis
ENSAOCG00000001659	-	69	54.907	ENSTNIG00000006844	rbm14b	80	55.224	Tetraodon_nigroviridis
ENSAOCG00000001659	-	99	84.663	ENSXCOG00000006825	-	99	84.663	Xiphophorus_couchianus
ENSAOCG00000001659	-	100	85.714	ENSXMAG00000000338	-	100	85.895	Xiphophorus_maculatus
ENSAOCG00000001659	-	74	48.755	ENSXMAG00000008390	rbm14b	83	49.170	Xiphophorus_maculatus