EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000001971 (Gene tree)
Gene ID: 111570495
Gene Symbol: -
Alias: -
Full Name: zinc finger and SCAN domain-containing protein 12-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 6804 bases
Position: chrNXFZ01002451.1:19564-26367
Accession: 111570495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000008791	zf-C2H2	PF00096.26	1e-17	1	3
ENSAOCP00000008791	zf-C2H2	PF00096.26	1e-17	2	3
ENSAOCP00000008791	zf-C2H2	PF00096.26	1e-17	3	3
ENSAOCP00000008791	zf-met	PF12874.7	3.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000000464	-	1598	XM_023273295	ENSAOCP00000008791	286 (aa)	XP_023129063	-

Gene Model

Click here to download ENSAOCG00000001971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000001971's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000001971	-	51	40.909	ENSAOCG00000013345	-	51	40.909
ENSAOCG00000001971	-	51	37.647	ENSAOCG00000021187	gfi1b	65	37.647
ENSAOCG00000001971	-	50	41.176	ENSAOCG00000022079	-	89	41.176
ENSAOCG00000001971	-	99	36.364	ENSAOCG00000007146	-	98	32.500
ENSAOCG00000001971	-	98	38.095	ENSAOCG00000012829	-	88	38.095
ENSAOCG00000001971	-	73	40.476	ENSAOCG00000013978	-	89	39.773
ENSAOCG00000001971	-	51	40.909	ENSAOCG00000024767	-	51	40.909
ENSAOCG00000001971	-	99	44.048	ENSAOCG00000022529	-	100	44.048
ENSAOCG00000001971	-	74	42.045	ENSAOCG00000013130	-	97	42.045
ENSAOCG00000001971	-	99	33.684	ENSAOCG00000010954	-	92	33.684
ENSAOCG00000001971	-	74	39.326	ENSAOCG00000002795	-	90	39.326
ENSAOCG00000001971	-	76	33.750	ENSAOCG00000012813	-	88	33.750
ENSAOCG00000001971	-	76	40.909	ENSAOCG00000022375	-	95	40.909
ENSAOCG00000001971	-	99	39.773	ENSAOCG00000012903	-	96	39.773
ENSAOCG00000001971	-	99	40.351	ENSAOCG00000020652	-	100	40.351
ENSAOCG00000001971	-	92	45.455	ENSAOCG00000003277	-	92	45.455
ENSAOCG00000001971	-	53	37.209	ENSAOCG00000013124	-	68	37.209
ENSAOCG00000001971	-	74	43.182	ENSAOCG00000015369	-	96	44.643

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000001971	-	99	42.857	ENSAPOG00000021966	-	99	42.857	Acanthochromis_polyacanthus
ENSAOCG00000001971	-	76	42.045	ENSACIG00000022738	-	88	47.170	Amphilophus_citrinellus
ENSAOCG00000001971	-	100	99.301	ENSAPEG00000011156	-	86	99.301	Amphiprion_percula
ENSAOCG00000001971	-	69	36.905	ENSATEG00000014684	-	99	36.905	Anabas_testudineus
ENSAOCG00000001971	-	53	37.363	ENSATEG00000022064	-	91	37.805	Anabas_testudineus
ENSAOCG00000001971	-	99	39.286	ENSACLG00000008374	-	91	39.286	Astatotilapia_calliptera
ENSAOCG00000001971	-	100	65.517	ENSCVAG00000000161	-	99	65.517	Cyprinodon_variegatus
ENSAOCG00000001971	-	61	38.889	ENSCVAG00000021152	-	78	38.889	Cyprinodon_variegatus
ENSAOCG00000001971	-	100	62.414	ENSFHEG00000003856	-	99	62.414	Fundulus_heteroclitus
ENSAOCG00000001971	-	100	66.207	ENSGAFG00000000549	-	99	66.207	Gambusia_affinis
ENSAOCG00000001971	-	64	34.259	ENSHCOG00000020309	-	60	34.259	Hippocampus_comes
ENSAOCG00000001971	-	70	41.176	ENSKMAG00000000802	-	88	41.176	Kryptolebias_marmoratus
ENSAOCG00000001971	-	53	38.824	ENSKMAG00000015304	-	65	38.824	Kryptolebias_marmoratus
ENSAOCG00000001971	-	99	39.286	ENSMZEG00005011431	-	91	39.286	Maylandia_zebra
ENSAOCG00000001971	-	52	42.045	ENSMZEG00005020568	-	67	42.045	Maylandia_zebra
ENSAOCG00000001971	-	100	71.626	ENSMALG00000012840	-	99	71.626	Monopterus_albus
ENSAOCG00000001971	-	98	44.048	ENSMALG00000005696	-	99	44.048	Monopterus_albus
ENSAOCG00000001971	-	99	39.286	ENSNBRG00000004792	-	91	39.286	Neolamprologus_brichardi
ENSAOCG00000001971	-	97	43.636	ENSPMGG00000001672	-	93	43.636	Periophthalmus_magnuspinnatus
ENSAOCG00000001971	-	99	35.632	ENSPMGG00000011591	-	99	35.632	Periophthalmus_magnuspinnatus
ENSAOCG00000001971	-	100	66.090	ENSPMEG00000004752	-	99	66.090	Poecilia_mexicana
ENSAOCG00000001971	-	99	37.079	ENSPNAG00000011705	-	92	37.079	Pygocentrus_nattereri
ENSAOCG00000001971	-	99	41.667	ENSSMAG00000006155	-	97	41.667	Scophthalmus_maximus
ENSAOCG00000001971	-	99	30.241	ENSSDUG00000022035	-	99	41.667	Seriola_dumerili
ENSAOCG00000001971	-	99	30.584	ENSSLDG00000025676	-	99	41.667	Seriola_lalandi_dorsalis
ENSAOCG00000001971	-	99	52.431	ENSTRUG00000021167	-	99	54.325	Takifugu_rubripes
ENSAOCG00000001971	-	96	38.889	ENSTRUG00000023354	-	97	38.889	Takifugu_rubripes
ENSAOCG00000001971	-	100	66.667	ENSXMAG00000028660	-	99	66.667	Xiphophorus_maculatus