EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000002071 (Gene tree)
Gene ID: 111579550
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: DNA-directed RNA polymerase III subunit RPC1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 25395 bases
Position: chrNXFZ01003461.1:58336-83730
Accession: 111579550
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000022881	RNA_pol_Rpb1_5	PF04998.17	1.1e-88	1	1
ENSAOCP00000022881	RNA_pol_Rpb1_4	PF05000.17	8.3e-32	1	1
ENSAOCP00000022881	RNA_pol_Rpb1_2	PF00623.20	1.4e-72	1	1
ENSAOCP00000022881	RNA_pol_Rpb1_3	PF04983.18	7e-41	1	1
ENSAOCP00000022881	RNA_pol_Rpb1_1	PF04997.12	9.5e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000006844	-	4173	XM_023286853	ENSAOCP00000022881	1390 (aa)	XP_023142621	UPI000C30A910

Gene Model

Click here to download ENSAOCG00000002071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000002071's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000002071	polr3a	91	37.859	ENSAOCG00000004255	polr2a	70	38.074
ENSAOCG00000002071	polr3a	100	96.619	ENSAOCG00000003949	-	100	96.619
ENSAOCG00000002071	polr3a	78	32.871	ENSAOCG00000017336	polr1a	74	32.799

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000002071	polr3a	100	90.504	ENSG00000148606	POLR3A	100	90.504	Homo_sapiens
ENSAOCG00000002071	polr3a	62	95.703	ENSAPOG00000022727	polr3a	99	95.703	Acanthochromis_polyacanthus
ENSAOCG00000002071	polr3a	100	90.309	ENSAMEG00000017801	POLR3A	100	90.309	Ailuropoda_melanoleuca
ENSAOCG00000002071	polr3a	94	97.231	ENSACIG00000024504	polr3a	97	97.231	Amphilophus_citrinellus
ENSAOCG00000002071	polr3a	100	100.000	ENSAPEG00000013351	polr3a	100	100.000	Amphiprion_percula
ENSAOCG00000002071	polr3a	100	99.784	ENSAPEG00000001966	-	100	99.784	Amphiprion_percula
ENSAOCG00000002071	polr3a	100	96.835	ENSATEG00000023277	polr3a	100	96.835	Anabas_testudineus
ENSAOCG00000002071	polr3a	99	90.764	ENSAPLG00000015878	POLR3A	99	90.764	Anas_platyrhynchos
ENSAOCG00000002071	polr3a	93	89.610	ENSACAG00000007985	POLR3A	99	89.610	Anolis_carolinensis
ENSAOCG00000002071	polr3a	100	87.931	ENSANAG00000028922	POLR3A	96	92.994	Aotus_nancymaae
ENSAOCG00000002071	polr3a	100	96.547	ENSACLG00000005914	polr3a	100	96.547	Astatotilapia_calliptera
ENSAOCG00000002071	polr3a	100	89.209	ENSAMXG00000018852	polr3a	100	89.209	Astyanax_mexicanus
ENSAOCG00000002071	polr3a	100	90.576	ENSBTAG00000013259	POLR3A	100	90.576	Bos_taurus
ENSAOCG00000002071	polr3a	98	57.071	WBGene00004411	rpc-1	99	57.071	Caenorhabditis_elegans
ENSAOCG00000002071	polr3a	100	90.288	ENSCJAG00000001015	POLR3A	100	90.288	Callithrix_jacchus
ENSAOCG00000002071	polr3a	100	90.432	ENSCAFG00000015546	POLR3A	100	90.432	Canis_familiaris
ENSAOCG00000002071	polr3a	100	90.432	ENSCAFG00020014711	POLR3A	100	90.432	Canis_lupus_dingo
ENSAOCG00000002071	polr3a	100	90.144	ENSCHIG00000000352	POLR3A	100	90.144	Capra_hircus
ENSAOCG00000002071	polr3a	100	90.072	ENSTSYG00000006671	POLR3A	100	90.072	Carlito_syrichta
ENSAOCG00000002071	polr3a	99	89.818	ENSCAPG00000016031	POLR3A	100	89.818	Cavia_aperea
ENSAOCG00000002071	polr3a	100	89.856	ENSCPOG00000022387	POLR3A	100	89.856	Cavia_porcellus
ENSAOCG00000002071	polr3a	100	88.777	ENSCCAG00000032995	POLR3A	100	88.777	Cebus_capucinus
ENSAOCG00000002071	polr3a	100	90.504	ENSCATG00000035842	POLR3A	100	90.504	Cercocebus_atys
ENSAOCG00000002071	polr3a	100	90.144	ENSCLAG00000009629	POLR3A	100	90.144	Chinchilla_lanigera
ENSAOCG00000002071	polr3a	100	90.504	ENSCSAG00000009292	POLR3A	100	90.504	Chlorocebus_sabaeus
ENSAOCG00000002071	polr3a	85	76.351	ENSCHOG00000008368	POLR3A	100	76.351	Choloepus_hoffmanni
ENSAOCG00000002071	polr3a	99	90.641	ENSCPBG00000002079	POLR3A	99	90.641	Chrysemys_picta_bellii
ENSAOCG00000002071	polr3a	99	69.092	ENSCSAVG00000009925	-	99	69.092	Ciona_savignyi
ENSAOCG00000002071	polr3a	86	86.446	ENSCANG00000041071	POLR3A	98	91.772	Colobus_angolensis_palliatus
ENSAOCG00000002071	polr3a	78	90.743	ENSCGRG00001015599	-	92	90.743	Cricetulus_griseus_chok1gshd
ENSAOCG00000002071	polr3a	88	89.736	ENSCGRG00000001019	Polr3a	100	89.736	Cricetulus_griseus_crigri
ENSAOCG00000002071	polr3a	100	95.899	ENSCSEG00000016653	polr3a	100	95.899	Cynoglossus_semilaevis
ENSAOCG00000002071	polr3a	100	95.612	ENSCVAG00000023049	polr3a	100	95.612	Cyprinodon_variegatus
ENSAOCG00000002071	polr3a	99	91.859	ENSDARG00000102569	polr3a	99	91.859	Danio_rerio
ENSAOCG00000002071	polr3a	100	89.568	ENSDNOG00000010194	POLR3A	100	89.568	Dasypus_novemcinctus
ENSAOCG00000002071	polr3a	100	90.504	ENSDORG00000000184	Polr3a	100	90.504	Dipodomys_ordii
ENSAOCG00000002071	polr3a	99	57.143	FBgn0030687	CG17209	99	57.143	Drosophila_melanogaster
ENSAOCG00000002071	polr3a	88	90.283	ENSETEG00000007477	POLR3A	89	90.283	Echinops_telfairi
ENSAOCG00000002071	polr3a	59	75.967	ENSEBUG00000013761	polr3a	98	75.967	Eptatretus_burgeri
ENSAOCG00000002071	polr3a	100	90.504	ENSEASG00005023053	POLR3A	100	90.504	Equus_asinus_asinus
ENSAOCG00000002071	polr3a	97	90.537	ENSECAG00000019416	POLR3A	100	90.343	Equus_caballus
ENSAOCG00000002071	polr3a	96	85.906	ENSEEUG00000001774	POLR3A	100	85.906	Erinaceus_europaeus
ENSAOCG00000002071	polr3a	100	91.242	ENSELUG00000014016	polr3a	100	91.242	Esox_lucius
ENSAOCG00000002071	polr3a	100	90.647	ENSFCAG00000000843	POLR3A	100	90.647	Felis_catus
ENSAOCG00000002071	polr3a	100	90.510	ENSFALG00000006913	POLR3A	100	90.510	Ficedula_albicollis
ENSAOCG00000002071	polr3a	100	89.928	ENSFDAG00000007813	POLR3A	100	89.928	Fukomys_damarensis
ENSAOCG00000002071	polr3a	95	95.526	ENSFHEG00000011922	polr3a	99	95.526	Fundulus_heteroclitus
ENSAOCG00000002071	polr3a	100	88.003	ENSGMOG00000000291	polr3a	99	88.003	Gadus_morhua
ENSAOCG00000002071	polr3a	100	90.935	ENSGALG00000004947	POLR3A	100	90.935	Gallus_gallus
ENSAOCG00000002071	polr3a	100	95.540	ENSGAFG00000005112	polr3a	100	95.540	Gambusia_affinis
ENSAOCG00000002071	polr3a	100	95.468	ENSGACG00000002304	polr3a	100	95.468	Gasterosteus_aculeatus
ENSAOCG00000002071	polr3a	95	90.462	ENSGAGG00000010386	POLR3A	98	90.462	Gopherus_agassizii
ENSAOCG00000002071	polr3a	99	89.451	ENSGGOG00000027729	POLR3A	100	91.574	Gorilla_gorilla
ENSAOCG00000002071	polr3a	100	96.547	ENSHBUG00000018098	polr3a	100	96.547	Haplochromis_burtoni
ENSAOCG00000002071	polr3a	100	89.928	ENSHGLG00000017899	POLR3A	100	89.928	Heterocephalus_glaber_female
ENSAOCG00000002071	polr3a	100	89.928	ENSHGLG00100008483	POLR3A	100	89.928	Heterocephalus_glaber_male
ENSAOCG00000002071	polr3a	100	94.892	ENSHCOG00000001075	polr3a	100	94.892	Hippocampus_comes
ENSAOCG00000002071	polr3a	100	90.432	ENSSTOG00000012983	POLR3A	100	90.432	Ictidomys_tridecemlineatus
ENSAOCG00000002071	polr3a	100	95.540	ENSKMAG00000015290	polr3a	100	95.540	Kryptolebias_marmoratus
ENSAOCG00000002071	polr3a	99	94.960	ENSLBEG00000017214	polr3a	99	94.960	Labrus_bergylta
ENSAOCG00000002071	polr3a	97	88.178	ENSLACG00000018557	POLR3A	99	88.178	Latimeria_chalumnae
ENSAOCG00000002071	polr3a	100	92.462	ENSLOCG00000004942	polr3a	100	92.462	Lepisosteus_oculatus
ENSAOCG00000002071	polr3a	100	89.073	ENSLAFG00000016719	POLR3A	100	89.073	Loxodonta_africana
ENSAOCG00000002071	polr3a	100	90.432	ENSMFAG00000032218	POLR3A	100	90.432	Macaca_fascicularis
ENSAOCG00000002071	polr3a	100	90.432	ENSMMUG00000005514	POLR3A	100	90.432	Macaca_mulatta
ENSAOCG00000002071	polr3a	99	84.132	ENSMNEG00000035163	POLR3A	99	90.036	Macaca_nemestrina
ENSAOCG00000002071	polr3a	100	86.835	ENSMLEG00000030014	POLR3A	98	92.405	Mandrillus_leucophaeus
ENSAOCG00000002071	polr3a	100	96.691	ENSMAMG00000017497	polr3a	100	96.691	Mastacembelus_armatus
ENSAOCG00000002071	polr3a	100	96.547	ENSMZEG00005000576	polr3a	100	96.547	Maylandia_zebra
ENSAOCG00000002071	polr3a	100	73.571	ENSMGAG00000005713	-	100	73.571	Meleagris_gallopavo
ENSAOCG00000002071	polr3a	100	88.417	ENSMAUG00000016247	Polr3a	100	88.417	Mesocricetus_auratus
ENSAOCG00000002071	polr3a	100	90.504	ENSMICG00000005937	POLR3A	100	91.659	Microcebus_murinus
ENSAOCG00000002071	polr3a	100	90.504	ENSMOCG00000012185	Polr3a	100	90.504	Microtus_ochrogaster
ENSAOCG00000002071	polr3a	100	95.899	ENSMMOG00000013822	polr3a	100	95.899	Mola_mola
ENSAOCG00000002071	polr3a	100	90.432	ENSMODG00000001036	POLR3A	100	90.432	Monodelphis_domestica
ENSAOCG00000002071	polr3a	100	96.331	ENSMALG00000001249	polr3a	100	96.331	Monopterus_albus
ENSAOCG00000002071	polr3a	100	90.360	MGP_CAROLIEiJ_G0019016	Polr3a	100	90.360	Mus_caroli
ENSAOCG00000002071	polr3a	100	90.432	ENSMUSG00000025280	Polr3a	100	90.432	Mus_musculus
ENSAOCG00000002071	polr3a	100	90.360	MGP_PahariEiJ_G0030029	Polr3a	100	90.360	Mus_pahari
ENSAOCG00000002071	polr3a	100	87.770	MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	Mus_spretus
ENSAOCG00000002071	polr3a	100	89.872	ENSMPUG00000003790	POLR3A	100	89.872	Mustela_putorius_furo
ENSAOCG00000002071	polr3a	100	89.353	ENSMLUG00000011522	POLR3A	100	89.353	Myotis_lucifugus
ENSAOCG00000002071	polr3a	100	89.065	ENSNGAG00000015863	Polr3a	100	89.065	Nannospalax_galili
ENSAOCG00000002071	polr3a	100	94.532	ENSNBRG00000014262	polr3a	100	94.532	Neolamprologus_brichardi
ENSAOCG00000002071	polr3a	88	84.036	ENSNLEG00000010501	POLR3A	92	84.036	Nomascus_leucogenys
ENSAOCG00000002071	polr3a	99	77.964	ENSMEUG00000012446	POLR3A	100	77.964	Notamacropus_eugenii
ENSAOCG00000002071	polr3a	100	85.683	ENSOPRG00000001880	-	100	85.683	Ochotona_princeps
ENSAOCG00000002071	polr3a	100	89.568	ENSODEG00000015146	POLR3A	100	89.568	Octodon_degus
ENSAOCG00000002071	polr3a	100	97.050	ENSONIG00000016129	polr3a	100	97.050	Oreochromis_niloticus
ENSAOCG00000002071	polr3a	98	89.701	ENSOANG00000007013	POLR3A	100	89.701	Ornithorhynchus_anatinus
ENSAOCG00000002071	polr3a	100	90.144	ENSOCUG00000012450	POLR3A	100	90.144	Oryctolagus_cuniculus
ENSAOCG00000002071	polr3a	100	96.115	ENSORLG00000008958	polr3a	100	96.115	Oryzias_latipes
ENSAOCG00000002071	polr3a	100	93.741	ENSORLG00020007525	polr3a	98	96.349	Oryzias_latipes_hni
ENSAOCG00000002071	polr3a	100	96.115	ENSORLG00015006633	polr3a	100	96.115	Oryzias_latipes_hsok
ENSAOCG00000002071	polr3a	100	95.396	ENSOMEG00000012865	polr3a	100	95.396	Oryzias_melastigma
ENSAOCG00000002071	polr3a	100	90.000	ENSOGAG00000010995	POLR3A	100	90.000	Otolemur_garnettii
ENSAOCG00000002071	polr3a	100	90.158	ENSOARG00000009656	POLR3A	100	90.158	Ovis_aries
ENSAOCG00000002071	polr3a	100	90.647	ENSPPRG00000002128	POLR3A	100	90.647	Panthera_pardus
ENSAOCG00000002071	polr3a	100	90.647	ENSPTIG00000020916	POLR3A	100	90.647	Panthera_tigris_altaica
ENSAOCG00000002071	polr3a	100	90.576	ENSPTRG00000002664	POLR3A	100	90.576	Pan_troglodytes
ENSAOCG00000002071	polr3a	100	90.432	ENSPANG00000022508	POLR3A	100	90.432	Papio_anubis
ENSAOCG00000002071	polr3a	100	92.734	ENSPKIG00000008140	polr3a	100	92.970	Paramormyrops_kingsleyae
ENSAOCG00000002071	polr3a	98	90.577	ENSPSIG00000002092	POLR3A	100	90.577	Pelodiscus_sinensis
ENSAOCG00000002071	polr3a	100	90.288	ENSPEMG00000006768	Polr3a	100	90.288	Peromyscus_maniculatus_bairdii
ENSAOCG00000002071	polr3a	100	90.432	ENSPCIG00000015842	POLR3A	100	90.432	Phascolarctos_cinereus
ENSAOCG00000002071	polr3a	54	96.779	ENSPFOG00000006458	polr3a	100	96.779	Poecilia_formosa
ENSAOCG00000002071	polr3a	100	95.971	ENSPLAG00000000997	polr3a	100	95.971	Poecilia_latipinna
ENSAOCG00000002071	polr3a	100	95.899	ENSPMEG00000006821	polr3a	100	95.899	Poecilia_mexicana
ENSAOCG00000002071	polr3a	100	95.827	ENSPREG00000002385	polr3a	100	95.827	Poecilia_reticulata
ENSAOCG00000002071	polr3a	93	90.318	ENSPPYG00000002305	POLR3A	99	90.318	Pongo_abelii
ENSAOCG00000002071	polr3a	84	78.053	ENSPCAG00000005690	POLR3A	87	78.053	Procavia_capensis
ENSAOCG00000002071	polr3a	100	90.360	ENSPCOG00000028311	POLR3A	100	90.360	Propithecus_coquereli
ENSAOCG00000002071	polr3a	100	89.065	ENSPVAG00000015553	POLR3A	100	89.065	Pteropus_vampyrus
ENSAOCG00000002071	polr3a	100	96.619	ENSPNYG00000020987	polr3a	100	96.619	Pundamilia_nyererei
ENSAOCG00000002071	polr3a	99	88.256	ENSPNAG00000006629	polr3a	99	88.256	Pygocentrus_nattereri
ENSAOCG00000002071	polr3a	100	90.288	ENSRNOG00000010008	Polr3a	100	90.288	Rattus_norvegicus
ENSAOCG00000002071	polr3a	100	86.906	ENSRBIG00000034967	POLR3A	98	92.405	Rhinopithecus_bieti
ENSAOCG00000002071	polr3a	100	90.432	ENSRROG00000025527	POLR3A	100	90.432	Rhinopithecus_roxellana
ENSAOCG00000002071	polr3a	97	50.279	YOR116C	RPO31	98	50.279	Saccharomyces_cerevisiae
ENSAOCG00000002071	polr3a	100	90.432	ENSSBOG00000022199	POLR3A	100	90.432	Saimiri_boliviensis_boliviensis
ENSAOCG00000002071	polr3a	100	90.360	ENSSHAG00000007588	POLR3A	94	90.360	Sarcophilus_harrisii
ENSAOCG00000002071	polr3a	100	93.381	ENSSFOG00015014357	polr3a	100	93.381	Scleropages_formosus
ENSAOCG00000002071	polr3a	100	95.971	ENSSMAG00000001780	polr3a	100	95.971	Scophthalmus_maximus
ENSAOCG00000002071	polr3a	100	97.482	ENSSDUG00000019840	polr3a	100	97.482	Seriola_dumerili
ENSAOCG00000002071	polr3a	100	97.482	ENSSLDG00000023908	polr3a	100	97.482	Seriola_lalandi_dorsalis
ENSAOCG00000002071	polr3a	69	89.655	ENSSARG00000009916	POLR3A	89	89.655	Sorex_araneus
ENSAOCG00000002071	polr3a	100	88.345	ENSSPUG00000013209	POLR3A	100	88.345	Sphenodon_punctatus
ENSAOCG00000002071	polr3a	100	98.561	ENSSPAG00000017712	polr3a	100	98.561	Stegastes_partitus
ENSAOCG00000002071	polr3a	100	90.432	ENSSSCG00000010327	POLR3A	100	90.432	Sus_scrofa
ENSAOCG00000002071	polr3a	100	90.719	ENSTGUG00000006423	-	100	90.719	Taeniopygia_guttata
ENSAOCG00000002071	polr3a	100	95.468	ENSTRUG00000013488	polr3a	100	95.468	Takifugu_rubripes
ENSAOCG00000002071	polr3a	100	95.402	ENSTNIG00000013151	polr3a	100	95.402	Tetraodon_nigroviridis
ENSAOCG00000002071	polr3a	71	91.489	ENSTBEG00000015288	POLR3A	75	91.489	Tupaia_belangeri
ENSAOCG00000002071	polr3a	100	83.957	ENSTTRG00000007817	POLR3A	100	83.957	Tursiops_truncatus
ENSAOCG00000002071	polr3a	100	88.201	ENSUAMG00000011283	POLR3A	100	88.201	Ursus_americanus
ENSAOCG00000002071	polr3a	100	90.504	ENSUMAG00000013913	POLR3A	100	90.504	Ursus_maritimus
ENSAOCG00000002071	polr3a	99	82.473	ENSVPAG00000003285	POLR3A	100	82.473	Vicugna_pacos
ENSAOCG00000002071	polr3a	100	90.432	ENSVVUG00000025523	POLR3A	100	90.432	Vulpes_vulpes
ENSAOCG00000002071	polr3a	86	90.476	ENSXETG00000018101	polr3a	100	90.476	Xenopus_tropicalis
ENSAOCG00000002071	polr3a	100	95.827	ENSXMAG00000015213	polr3a	100	95.827	Xiphophorus_maculatus