EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000002627 (Gene tree)
Gene ID: 111568154
Gene Symbol: -
Alias: -
Full Name: secretion associated Ras related GTPase 1A
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 4416 bases
Position: chrNXFZ01000274.1:305191-309606
Accession: 111568154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000023171	MMR_HSR1	PF01926.23	7.7e-06	1	1
ENSAOCP00000005551	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000006124	-	393	-	ENSAOCP00000005551	130 (aa)	-	-
ENSAOCT00000006111	-	2624	XM_023269666	ENSAOCP00000023171	198 (aa)	XP_023125434	UPI000B8F727B

Gene Model

Click here to download ENSAOCG00000002627's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000002627's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000002627	-	79	34.821	ENSAOCG00000018628	-	71	36.364
ENSAOCG00000002627	-	72	33.333	ENSAOCG00000024181	-	86	33.333
ENSAOCG00000002627	-	95	30.081	ENSAOCG00000013722	arl5a	64	30.081
ENSAOCG00000002627	-	75	37.755	ENSAOCG00000023329	arf5	54	37.755
ENSAOCG00000002627	-	83	31.515	ENSAOCG00000000600	arl11	88	31.515
ENSAOCG00000002627	-	76	30.000	ENSAOCG00000024419	arl8bb	54	30.000
ENSAOCG00000002627	-	94	31.551	ENSAOCG00000001809	arf2b	96	31.551
ENSAOCG00000002627	-	92	32.787	ENSAOCG00000004724	arl2	93	32.787
ENSAOCG00000002627	-	76	30.000	ENSAOCG00000009256	arl8a	73	32.414
ENSAOCG00000002627	-	86	30.337	ENSAOCG00000003286	arfrp1	84	30.337
ENSAOCG00000002627	-	100	84.343	ENSAOCG00000005888	sar1b	100	84.343
ENSAOCG00000002627	-	100	81.818	ENSAOCG00000022062	sar1ab	100	81.818
ENSAOCG00000002627	-	83	34.259	ENSAOCG00000013349	-	59	34.259
ENSAOCG00000002627	-	94	31.053	ENSAOCG00000003575	ARL6	96	31.053
ENSAOCG00000002627	-	95	30.928	ENSAOCG00000007094	arl3l2	97	30.928
ENSAOCG00000002627	-	74	35.417	ENSAOCG00000010448	arl5c	54	35.417
ENSAOCG00000002627	-	92	32.787	ENSAOCG00000013008	arl1	93	32.787
ENSAOCG00000002627	-	87	30.857	ENSAOCG00000008113	-	89	30.857
ENSAOCG00000002627	-	89	32.778	ENSAOCG00000008262	-	92	32.778
ENSAOCG00000002627	-	78	33.333	ENSAOCG00000020462	arl8	58	32.673
ENSAOCG00000002627	-	75	31.633	ENSAOCG00000024749	-	60	30.631
ENSAOCG00000002627	-	83	36.111	ENSAOCG00000001275	-	82	33.099
ENSAOCG00000002627	-	65	31.765	ENSAOCG00000022197	arl3	53	30.851
ENSAOCG00000002627	-	83	34.259	ENSAOCG00000007571	arf3b	87	30.058

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000002627	-	100	84.848	ENSAPOG00000007186	sar1b	100	84.848	Acanthochromis_polyacanthus
ENSAOCG00000002627	-	100	100.000	ENSAPOG00000017891	-	100	100.000	Acanthochromis_polyacanthus
ENSAOCG00000002627	-	100	85.859	ENSACIG00000013634	sar1b	100	85.859	Amphilophus_citrinellus
ENSAOCG00000002627	-	100	97.475	ENSACIG00000024513	-	100	97.475	Amphilophus_citrinellus
ENSAOCG00000002627	-	100	100.000	ENSAPEG00000019680	-	100	100.000	Amphiprion_percula
ENSAOCG00000002627	-	100	84.343	ENSAPEG00000022771	sar1b	100	84.343	Amphiprion_percula
ENSAOCG00000002627	-	100	95.960	ENSATEG00000023368	-	100	95.960	Anabas_testudineus
ENSAOCG00000002627	-	100	83.333	ENSATEG00000012904	sar1b	100	83.333	Anabas_testudineus
ENSAOCG00000002627	-	100	84.343	ENSACAG00000001470	-	100	84.343	Anolis_carolinensis
ENSAOCG00000002627	-	100	85.354	ENSACLG00000014649	sar1b	100	85.354	Astatotilapia_calliptera
ENSAOCG00000002627	-	100	97.980	ENSACLG00000005011	-	100	97.980	Astatotilapia_calliptera
ENSAOCG00000002627	-	100	91.414	ENSAMXG00000034192	-	91	91.414	Astyanax_mexicanus
ENSAOCG00000002627	-	90	91.453	ENSAMXG00000018108	sar1b	84	91.453	Astyanax_mexicanus
ENSAOCG00000002627	-	100	79.798	ENSCSEG00000015238	sar1b	97	79.798	Cynoglossus_semilaevis
ENSAOCG00000002627	-	100	94.444	ENSCSEG00000016976	-	100	94.444	Cynoglossus_semilaevis
ENSAOCG00000002627	-	100	86.869	ENSCVAG00000022959	sar1b	100	86.869	Cyprinodon_variegatus
ENSAOCG00000002627	-	100	86.364	ENSDARG00000103403	sar1b	100	86.364	Danio_rerio
ENSAOCG00000002627	-	99	69.388	FBgn0038947	Sar1	99	69.388	Drosophila_melanogaster
ENSAOCG00000002627	-	97	80.729	ENSEBUG00000011723	sar1b	97	80.729	Eptatretus_burgeri
ENSAOCG00000002627	-	100	87.374	ENSELUG00000020912	sar1b	100	87.374	Esox_lucius
ENSAOCG00000002627	-	100	85.859	ENSFHEG00000019865	sar1b	100	85.859	Fundulus_heteroclitus
ENSAOCG00000002627	-	100	85.859	ENSGMOG00000008023	sar1b	100	85.859	Gadus_morhua
ENSAOCG00000002627	-	100	84.343	ENSGAFG00000007081	sar1b	100	84.343	Gambusia_affinis
ENSAOCG00000002627	-	100	82.828	ENSGACG00000001474	sar1b	100	82.828	Gasterosteus_aculeatus
ENSAOCG00000002627	-	100	85.354	ENSHBUG00000000915	sar1b	100	85.354	Haplochromis_burtoni
ENSAOCG00000002627	-	100	97.980	ENSHBUG00000018397	-	100	97.980	Haplochromis_burtoni
ENSAOCG00000002627	-	100	84.343	ENSHCOG00000010953	sar1b	100	84.343	Hippocampus_comes
ENSAOCG00000002627	-	100	84.848	ENSIPUG00000020925	sar1b	100	84.848	Ictalurus_punctatus
ENSAOCG00000002627	-	100	89.394	ENSIPUG00000010046	sar1b	100	89.394	Ictalurus_punctatus
ENSAOCG00000002627	-	100	84.848	ENSKMAG00000019693	sar1b	100	84.848	Kryptolebias_marmoratus
ENSAOCG00000002627	-	100	92.929	ENSKMAG00000014875	-	100	92.929	Kryptolebias_marmoratus
ENSAOCG00000002627	-	100	81.818	ENSLBEG00000027550	sar1b	100	81.818	Labrus_bergylta
ENSAOCG00000002627	-	100	97.980	ENSLBEG00000016945	-	100	97.980	Labrus_bergylta
ENSAOCG00000002627	-	100	81.313	ENSLACG00000010795	sar1b	100	81.313	Latimeria_chalumnae
ENSAOCG00000002627	-	100	67.337	ENSLACG00000017029	-	100	67.337	Latimeria_chalumnae
ENSAOCG00000002627	-	100	87.879	ENSLOCG00000005214	-	100	87.879	Lepisosteus_oculatus
ENSAOCG00000002627	-	100	86.364	ENSLOCG00000010197	sar1b	100	86.364	Lepisosteus_oculatus
ENSAOCG00000002627	-	100	83.333	ENSMAMG00000021732	sar1b	100	83.333	Mastacembelus_armatus
ENSAOCG00000002627	-	100	97.980	ENSMZEG00005001012	-	100	97.980	Maylandia_zebra
ENSAOCG00000002627	-	100	85.354	ENSMZEG00005008942	sar1b	100	85.354	Maylandia_zebra
ENSAOCG00000002627	-	90	85.475	ENSMGAG00000005387	-	91	85.475	Meleagris_gallopavo
ENSAOCG00000002627	-	100	97.475	ENSMMOG00000013803	-	100	97.475	Mola_mola
ENSAOCG00000002627	-	100	83.838	ENSMALG00000016635	sar1b	97	82.418	Monopterus_albus
ENSAOCG00000002627	-	100	98.485	ENSNBRG00000014004	-	100	98.485	Neolamprologus_brichardi
ENSAOCG00000002627	-	100	85.354	ENSNBRG00000008013	sar1b	100	85.354	Neolamprologus_brichardi
ENSAOCG00000002627	-	100	85.354	ENSONIG00000017278	sar1b	100	85.354	Oreochromis_niloticus
ENSAOCG00000002627	-	100	85.859	ENSORLG00000000932	sar1b	100	85.859	Oryzias_latipes
ENSAOCG00000002627	-	100	85.859	ENSORLG00020021985	sar1b	100	85.859	Oryzias_latipes_hni
ENSAOCG00000002627	-	100	85.859	ENSORLG00015007044	sar1b	100	85.859	Oryzias_latipes_hsok
ENSAOCG00000002627	-	100	84.343	ENSOMEG00000001052	sar1b	100	84.343	Oryzias_melastigma
ENSAOCG00000002627	-	100	84.343	ENSPKIG00000010688	sar1b	100	84.343	Paramormyrops_kingsleyae
ENSAOCG00000002627	-	100	86.869	ENSPKIG00000017353	-	100	86.869	Paramormyrops_kingsleyae
ENSAOCG00000002627	-	92	87.500	ENSPMGG00000001234	sar1b	98	84.921	Periophthalmus_magnuspinnatus
ENSAOCG00000002627	-	100	80.597	ENSPMAG00000003593	sar1b	100	80.597	Petromyzon_marinus
ENSAOCG00000002627	-	100	84.343	ENSPFOG00000005666	sar1b	100	84.343	Poecilia_formosa
ENSAOCG00000002627	-	90	93.162	ENSPLAG00000001016	-	80	88.710	Poecilia_latipinna
ENSAOCG00000002627	-	100	84.848	ENSPLAG00000012223	sar1b	100	84.848	Poecilia_latipinna
ENSAOCG00000002627	-	100	84.343	ENSPMEG00000016831	sar1b	100	84.343	Poecilia_mexicana
ENSAOCG00000002627	-	100	88.462	ENSPREG00000002020	-	95	88.462	Poecilia_reticulata
ENSAOCG00000002627	-	100	84.343	ENSPREG00000005312	sar1b	90	84.343	Poecilia_reticulata
ENSAOCG00000002627	-	100	97.475	ENSPNYG00000021357	-	100	97.475	Pundamilia_nyererei
ENSAOCG00000002627	-	100	85.354	ENSPNYG00000012440	sar1b	100	85.354	Pundamilia_nyererei
ENSAOCG00000002627	-	100	92.424	ENSPNAG00000001123	-	100	92.424	Pygocentrus_nattereri
ENSAOCG00000002627	-	100	86.869	ENSPNAG00000014683	sar1b	100	86.869	Pygocentrus_nattereri
ENSAOCG00000002627	-	100	87.374	ENSSFOG00015020051	sar1b	100	87.374	Scleropages_formosus
ENSAOCG00000002627	-	100	86.364	ENSSFOG00015018128	-	100	86.364	Scleropages_formosus
ENSAOCG00000002627	-	100	95.455	ENSSMAG00000002165	-	100	95.455	Scophthalmus_maximus
ENSAOCG00000002627	-	100	81.818	ENSSMAG00000007106	sar1b	80	81.818	Scophthalmus_maximus
ENSAOCG00000002627	-	100	98.485	ENSSDUG00000019629	-	100	98.485	Seriola_dumerili
ENSAOCG00000002627	-	100	85.354	ENSSDUG00000020926	sar1b	94	91.379	Seriola_dumerili
ENSAOCG00000002627	-	100	98.485	ENSSLDG00000024197	-	100	98.485	Seriola_lalandi_dorsalis
ENSAOCG00000002627	-	100	85.354	ENSSLDG00000017052	sar1b	94	92.593	Seriola_lalandi_dorsalis
ENSAOCG00000002627	-	100	84.343	ENSSPUG00000010247	-	100	84.343	Sphenodon_punctatus
ENSAOCG00000002627	-	100	85.354	ENSSPAG00000017634	sar1b	100	85.354	Stegastes_partitus
ENSAOCG00000002627	-	100	98.990	ENSSPAG00000015626	-	100	98.990	Stegastes_partitus
ENSAOCG00000002627	-	100	81.313	ENSTRUG00000023908	sar1b	100	81.313	Takifugu_rubripes
ENSAOCG00000002627	-	100	82.828	ENSTNIG00000016097	sar1b	100	82.828	Tetraodon_nigroviridis
ENSAOCG00000002627	-	90	83.708	ENSXCOG00000004160	sar1b	87	83.708	Xiphophorus_couchianus
ENSAOCG00000002627	-	88	93.043	ENSXCOG00000006154	-	79	91.453	Xiphophorus_couchianus
ENSAOCG00000002627	-	100	84.343	ENSXMAG00000008294	sar1b	100	84.343	Xiphophorus_maculatus