EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000002663 (Gene tree)
Gene ID: 111578559
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 2850 bases
Position: chrNXFZ01001006.1:484460-487309
Accession: 111578559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000012910	GTP_EFTU	PF00009.27	8.5e-55	1	1
ENSAOCP00000012910	MMR_HSR1	PF01926.23	1.1e-06	1	1
ENSAOCP00000012910	GTP_EFTU_D2	PF03144.25	1.7e-12	1	1
ENSAOCP00000012910	GTP_EFTU_D3	PF03143.17	6.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000020787	-	2350	XM_023285425	ENSAOCP00000012910	457 (aa)	XP_023141193	UPI000C2FFD1B

Gene Model

Click here to download ENSAOCG00000002663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000002663's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000002663	si:dkey-37o8.1	87	69.424	ENSAOCG00000022002	-	99	68.780
ENSAOCG00000002663	si:dkey-37o8.1	99	70.614	ENSAOCG00000012886	eef1a1b	99	70.614
ENSAOCG00000002663	si:dkey-37o8.1	96	30.357	ENSAOCG00000001032	tufm	87	30.357
ENSAOCG00000002663	si:dkey-37o8.1	97	36.569	ENSAOCG00000020972	-	73	36.323
ENSAOCG00000002663	si:dkey-37o8.1	99	70.742	ENSAOCG00000022039	-	99	70.742
ENSAOCG00000002663	si:dkey-37o8.1	96	36.878	ENSAOCG00000016342	gspt1l	87	36.878
ENSAOCG00000002663	si:dkey-37o8.1	99	71.930	ENSAOCG00000022025	-	99	71.930
ENSAOCG00000002663	si:dkey-37o8.1	100	69.697	ENSAOCG00000001055	-	100	69.697

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000002663	si:dkey-37o8.1	100	97.374	ENSAPOG00000016459	si:dkey-37o8.1	100	97.374	Acanthochromis_polyacanthus
ENSAOCG00000002663	si:dkey-37o8.1	97	90.112	ENSACIG00000020985	si:dkey-37o8.1	83	90.112	Amphilophus_citrinellus
ENSAOCG00000002663	si:dkey-37o8.1	100	99.781	ENSAPEG00000012670	si:dkey-37o8.1	100	99.781	Amphiprion_percula
ENSAOCG00000002663	si:dkey-37o8.1	92	95.024	ENSATEG00000002217	si:dkey-37o8.1	99	95.024	Anabas_testudineus
ENSAOCG00000002663	si:dkey-37o8.1	100	92.560	ENSACLG00000003519	si:dkey-37o8.1	100	92.560	Astatotilapia_calliptera
ENSAOCG00000002663	si:dkey-37o8.1	100	86.463	ENSAMXG00000002728	si:dkey-37o8.1	100	86.463	Astyanax_mexicanus
ENSAOCG00000002663	si:dkey-37o8.1	99	74.123	ENSCPBG00000020570	-	90	74.123	Chrysemys_picta_bellii
ENSAOCG00000002663	si:dkey-37o8.1	100	87.582	ENSCSEG00000019807	si:dkey-37o8.1	100	86.853	Cynoglossus_semilaevis
ENSAOCG00000002663	si:dkey-37o8.1	99	90.088	ENSCVAG00000009828	si:dkey-37o8.1	99	90.088	Cyprinodon_variegatus
ENSAOCG00000002663	si:dkey-37o8.1	100	82.533	ENSDARG00000071727	si:dkey-37o8.1	95	82.533	Danio_rerio
ENSAOCG00000002663	si:dkey-37o8.1	100	85.153	ENSELUG00000007495	si:dkey-37o8.1	100	85.153	Esox_lucius
ENSAOCG00000002663	si:dkey-37o8.1	100	89.716	ENSFHEG00000017452	si:dkey-37o8.1	100	89.716	Fundulus_heteroclitus
ENSAOCG00000002663	si:dkey-37o8.1	99	80.617	ENSGMOG00000006122	si:dkey-37o8.1	100	80.617	Gadus_morhua
ENSAOCG00000002663	si:dkey-37o8.1	98	83.556	ENSGAFG00000000367	si:dkey-37o8.1	100	83.556	Gambusia_affinis
ENSAOCG00000002663	si:dkey-37o8.1	100	89.497	ENSGACG00000004505	si:dkey-37o8.1	100	89.497	Gasterosteus_aculeatus
ENSAOCG00000002663	si:dkey-37o8.1	99	74.781	ENSGAGG00000007724	-	97	77.885	Gopherus_agassizii
ENSAOCG00000002663	si:dkey-37o8.1	100	92.341	ENSHBUG00000015515	si:dkey-37o8.1	100	92.341	Haplochromis_burtoni
ENSAOCG00000002663	si:dkey-37o8.1	99	79.379	ENSHCOG00000001215	si:dkey-37o8.1	100	79.379	Hippocampus_comes
ENSAOCG00000002663	si:dkey-37o8.1	100	83.843	ENSIPUG00000004067	si:dkey-37o8.1	100	83.843	Ictalurus_punctatus
ENSAOCG00000002663	si:dkey-37o8.1	100	89.716	ENSKMAG00000015910	si:dkey-37o8.1	100	89.716	Kryptolebias_marmoratus
ENSAOCG00000002663	si:dkey-37o8.1	100	93.654	ENSLBEG00000021334	si:dkey-37o8.1	90	93.654	Labrus_bergylta
ENSAOCG00000002663	si:dkey-37o8.1	99	75.991	ENSLACG00000003948	si:dkey-37o8.1	99	75.991	Latimeria_chalumnae
ENSAOCG00000002663	si:dkey-37o8.1	100	80.610	ENSLOCG00000011245	si:dkey-37o8.1	100	80.610	Lepisosteus_oculatus
ENSAOCG00000002663	si:dkey-37o8.1	99	75.664	ENSMAMG00000009907	si:dkey-37o8.1	95	75.664	Mastacembelus_armatus
ENSAOCG00000002663	si:dkey-37o8.1	100	92.560	ENSMZEG00005018358	si:dkey-37o8.1	100	92.560	Maylandia_zebra
ENSAOCG00000002663	si:dkey-37o8.1	98	91.314	ENSMMOG00000004111	si:dkey-37o8.1	98	91.314	Mola_mola
ENSAOCG00000002663	si:dkey-37o8.1	96	82.648	ENSMALG00000017152	si:dkey-37o8.1	99	82.648	Monopterus_albus
ENSAOCG00000002663	si:dkey-37o8.1	100	92.779	ENSNBRG00000013552	si:dkey-37o8.1	100	92.779	Neolamprologus_brichardi
ENSAOCG00000002663	si:dkey-37o8.1	100	92.560	ENSONIG00000006165	si:dkey-37o8.1	100	92.560	Oreochromis_niloticus
ENSAOCG00000002663	si:dkey-37o8.1	100	91.466	ENSORLG00000019066	si:dkey-37o8.1	100	91.466	Oryzias_latipes
ENSAOCG00000002663	si:dkey-37o8.1	100	91.466	ENSORLG00020008094	si:dkey-37o8.1	100	91.466	Oryzias_latipes_hni
ENSAOCG00000002663	si:dkey-37o8.1	100	91.028	ENSORLG00015008410	si:dkey-37o8.1	100	91.028	Oryzias_latipes_hsok
ENSAOCG00000002663	si:dkey-37o8.1	100	91.466	ENSOMEG00000001868	si:dkey-37o8.1	100	91.466	Oryzias_melastigma
ENSAOCG00000002663	si:dkey-37o8.1	100	83.660	ENSPKIG00000017246	si:dkey-37o8.1	100	83.660	Paramormyrops_kingsleyae
ENSAOCG00000002663	si:dkey-37o8.1	59	68.000	ENSPSIG00000008080	-	97	68.000	Pelodiscus_sinensis
ENSAOCG00000002663	si:dkey-37o8.1	100	90.372	ENSPFOG00000013173	si:dkey-37o8.1	100	90.372	Poecilia_formosa
ENSAOCG00000002663	si:dkey-37o8.1	100	89.278	ENSPLAG00000010405	si:dkey-37o8.1	100	89.278	Poecilia_latipinna
ENSAOCG00000002663	si:dkey-37o8.1	100	90.591	ENSPMEG00000015233	si:dkey-37o8.1	100	90.591	Poecilia_mexicana
ENSAOCG00000002663	si:dkey-37o8.1	99	89.868	ENSPREG00000006280	si:dkey-37o8.1	100	89.868	Poecilia_reticulata
ENSAOCG00000002663	si:dkey-37o8.1	100	91.904	ENSPNYG00000002059	si:dkey-37o8.1	100	91.904	Pundamilia_nyererei
ENSAOCG00000002663	si:dkey-37o8.1	100	84.716	ENSPNAG00000009990	si:dkey-37o8.1	100	84.716	Pygocentrus_nattereri
ENSAOCG00000002663	si:dkey-37o8.1	97	83.521	ENSSFOG00015019070	si:dkey-37o8.1	97	83.521	Scleropages_formosus
ENSAOCG00000002663	si:dkey-37o8.1	100	94.530	ENSSMAG00000016143	si:dkey-37o8.1	100	94.530	Scophthalmus_maximus
ENSAOCG00000002663	si:dkey-37o8.1	100	94.311	ENSSDUG00000009163	si:dkey-37o8.1	100	94.311	Seriola_dumerili
ENSAOCG00000002663	si:dkey-37o8.1	100	94.092	ENSSLDG00000023761	si:dkey-37o8.1	100	94.092	Seriola_lalandi_dorsalis
ENSAOCG00000002663	si:dkey-37o8.1	97	72.809	ENSSPUG00000007467	-	97	72.809	Sphenodon_punctatus
ENSAOCG00000002663	si:dkey-37o8.1	100	97.155	ENSSPAG00000013856	si:dkey-37o8.1	100	97.155	Stegastes_partitus
ENSAOCG00000002663	si:dkey-37o8.1	99	92.070	ENSTRUG00000009006	si:dkey-37o8.1	100	92.070	Takifugu_rubripes
ENSAOCG00000002663	si:dkey-37o8.1	99	90.789	ENSTNIG00000017138	si:dkey-37o8.1	98	90.789	Tetraodon_nigroviridis
ENSAOCG00000002663	si:dkey-37o8.1	96	77.626	ENSXETG00000017744	42Sp50	97	75.831	Xenopus_tropicalis
ENSAOCG00000002663	si:dkey-37o8.1	99	89.868	ENSXCOG00000012296	si:dkey-37o8.1	100	91.209	Xiphophorus_couchianus
ENSAOCG00000002663	si:dkey-37o8.1	100	89.934	ENSXMAG00000001998	si:dkey-37o8.1	100	89.934	Xiphophorus_maculatus