EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000002890 (Gene tree)
Gene ID: 111587713
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 12851 bases
Position: chrNXFZ01005796.1:343579-356429
Accession: 111587713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000019480	zf-RanBP	PF00641.18	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000015559	-	3923	XM_023297798	ENSAOCP00000019480	712 (aa)	XP_023153566	UPI000C30C896

Gene Model

Click here to download ENSAOCG00000002890's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000002890's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000002890	shrprbck1r	60	59.302	ENSAOCG00000017464	sharpin	95	59.302

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000002890	shrprbck1r	60	59.070	ENSAPOG00000023352	sharpin	95	59.070	Acanthochromis_polyacanthus
ENSAOCG00000002890	shrprbck1r	100	93.147	ENSAPOG00000022737	shrprbck1r	100	93.147	Acanthochromis_polyacanthus
ENSAOCG00000002890	shrprbck1r	100	86.695	ENSACIG00000002184	shrprbck1r	100	86.695	Amphilophus_citrinellus
ENSAOCG00000002890	shrprbck1r	100	95.245	ENSAPEG00000023274	shrprbck1r	100	95.245	Amphiprion_percula
ENSAOCG00000002890	shrprbck1r	60	59.302	ENSAPEG00000004049	sharpin	95	59.302	Amphiprion_percula
ENSAOCG00000002890	shrprbck1r	60	60.417	ENSATEG00000007832	sharpin	88	60.417	Anabas_testudineus
ENSAOCG00000002890	shrprbck1r	100	85.694	ENSATEG00000014561	shrprbck1r	100	85.694	Anabas_testudineus
ENSAOCG00000002890	shrprbck1r	100	85.854	ENSACLG00000022609	shrprbck1r	100	86.134	Astatotilapia_calliptera
ENSAOCG00000002890	shrprbck1r	55	59.184	ENSAMXG00000006229	sharpin	97	59.184	Astyanax_mexicanus
ENSAOCG00000002890	shrprbck1r	100	71.272	ENSAMXG00000021016	shrprbck1r	100	71.370	Astyanax_mexicanus
ENSAOCG00000002890	shrprbck1r	100	77.871	ENSCSEG00000011306	shrprbck1r	100	78.291	Cynoglossus_semilaevis
ENSAOCG00000002890	shrprbck1r	65	53.118	ENSCVAG00000006586	sharpin	99	53.118	Cyprinodon_variegatus
ENSAOCG00000002890	shrprbck1r	100	82.444	ENSCVAG00000007250	shrprbck1r	100	82.444	Cyprinodon_variegatus
ENSAOCG00000002890	shrprbck1r	55	55.897	ENSDARG00000076995	sharpin	94	55.897	Danio_rerio
ENSAOCG00000002890	shrprbck1r	100	71.745	ENSDARG00000059871	shrprbck1r	100	72.022	Danio_rerio
ENSAOCG00000002890	shrprbck1r	100	76.364	ENSELUG00000016022	shrprbck1r	100	76.364	Esox_lucius
ENSAOCG00000002890	shrprbck1r	60	55.452	ENSFHEG00000013564	sharpin	94	55.452	Fundulus_heteroclitus
ENSAOCG00000002890	shrprbck1r	53	60.355	ENSGMOG00000010123	sharpin	93	60.355	Gadus_morhua
ENSAOCG00000002890	shrprbck1r	100	82.022	ENSGAFG00000009309	shrprbck1r	100	82.022	Gambusia_affinis
ENSAOCG00000002890	shrprbck1r	60	43.897	ENSGAFG00000021405	sharpin	95	43.897	Gambusia_affinis
ENSAOCG00000002890	shrprbck1r	75	83.083	ENSGACG00000002544	shrprbck1r	100	83.083	Gasterosteus_aculeatus
ENSAOCG00000002890	shrprbck1r	100	86.415	ENSHBUG00000021933	shrprbck1r	100	86.415	Haplochromis_burtoni
ENSAOCG00000002890	shrprbck1r	60	54.333	ENSHCOG00000018847	sharpin	80	54.801	Hippocampus_comes
ENSAOCG00000002890	shrprbck1r	96	70.115	ENSIPUG00000014247	shrprbck1r	96	69.744	Ictalurus_punctatus
ENSAOCG00000002890	shrprbck1r	54	56.853	ENSIPUG00000011951	sharpin	95	88.462	Ictalurus_punctatus
ENSAOCG00000002890	shrprbck1r	60	57.373	ENSKMAG00000015204	sharpin	76	57.373	Kryptolebias_marmoratus
ENSAOCG00000002890	shrprbck1r	100	81.981	ENSKMAG00000015215	shrprbck1r	100	82.256	Kryptolebias_marmoratus
ENSAOCG00000002890	shrprbck1r	100	87.377	ENSLBEG00000016876	shrprbck1r	100	87.518	Labrus_bergylta
ENSAOCG00000002890	shrprbck1r	60	58.716	ENSLBEG00000016624	sharpin	96	58.716	Labrus_bergylta
ENSAOCG00000002890	shrprbck1r	95	53.712	ENSLACG00000010948	-	97	53.712	Latimeria_chalumnae
ENSAOCG00000002890	shrprbck1r	100	71.012	ENSLOCG00000008910	shrprbck1r	100	71.468	Lepisosteus_oculatus
ENSAOCG00000002890	shrprbck1r	100	84.712	ENSMAMG00000022930	shrprbck1r	100	84.712	Mastacembelus_armatus
ENSAOCG00000002890	shrprbck1r	53	67.742	ENSMAMG00000014645	sharpin	95	67.742	Mastacembelus_armatus
ENSAOCG00000002890	shrprbck1r	100	85.714	ENSMZEG00005021257	shrprbck1r	100	85.994	Maylandia_zebra
ENSAOCG00000002890	shrprbck1r	100	81.085	ENSMMOG00000003764	shrprbck1r	100	81.528	Mola_mola
ENSAOCG00000002890	shrprbck1r	53	67.742	ENSMALG00000020528	sharpin	96	67.742	Monopterus_albus
ENSAOCG00000002890	shrprbck1r	96	85.903	ENSMALG00000008861	shrprbck1r	95	85.903	Monopterus_albus
ENSAOCG00000002890	shrprbck1r	100	86.134	ENSNBRG00000002270	shrprbck1r	100	86.415	Neolamprologus_brichardi
ENSAOCG00000002890	shrprbck1r	100	85.434	ENSONIG00000014401	shrprbck1r	100	85.714	Oreochromis_niloticus
ENSAOCG00000002890	shrprbck1r	55	56.479	ENSONIG00000009626	-	97	56.479	Oreochromis_niloticus
ENSAOCG00000002890	shrprbck1r	100	83.006	ENSORLG00000007392	shrprbck1r	100	83.006	Oryzias_latipes
ENSAOCG00000002890	shrprbck1r	60	56.561	ENSORLG00000017281	sharpin	95	56.561	Oryzias_latipes
ENSAOCG00000002890	shrprbck1r	100	82.584	ENSORLG00020018619	shrprbck1r	100	82.584	Oryzias_latipes_hni
ENSAOCG00000002890	shrprbck1r	60	56.463	ENSORLG00020000801	sharpin	95	56.463	Oryzias_latipes_hni
ENSAOCG00000002890	shrprbck1r	60	56.689	ENSORLG00015009860	sharpin	95	56.689	Oryzias_latipes_hsok
ENSAOCG00000002890	shrprbck1r	100	82.725	ENSORLG00015018865	shrprbck1r	100	82.725	Oryzias_latipes_hsok
ENSAOCG00000002890	shrprbck1r	100	83.848	ENSOMEG00000012749	shrprbck1r	100	83.848	Oryzias_melastigma
ENSAOCG00000002890	shrprbck1r	52	54.348	ENSOMEG00000005729	sharpin	89	54.348	Oryzias_melastigma
ENSAOCG00000002890	shrprbck1r	100	73.501	ENSPKIG00000006933	shrprbck1r	100	73.640	Paramormyrops_kingsleyae
ENSAOCG00000002890	shrprbck1r	65	62.156	ENSPKIG00000018308	-	96	62.156	Paramormyrops_kingsleyae
ENSAOCG00000002890	shrprbck1r	100	78.541	ENSPMGG00000013254	shrprbck1r	100	78.541	Periophthalmus_magnuspinnatus
ENSAOCG00000002890	shrprbck1r	100	83.006	ENSPFOG00000004214	shrprbck1r	100	83.006	Poecilia_formosa
ENSAOCG00000002890	shrprbck1r	60	54.801	ENSPFOG00000015253	sharpin	95	54.801	Poecilia_formosa
ENSAOCG00000002890	shrprbck1r	100	82.865	ENSPLAG00000020523	shrprbck1r	100	82.865	Poecilia_latipinna
ENSAOCG00000002890	shrprbck1r	60	55.035	ENSPLAG00000000423	sharpin	95	55.035	Poecilia_latipinna
ENSAOCG00000002890	shrprbck1r	100	81.882	ENSPMEG00000006877	shrprbck1r	100	81.882	Poecilia_mexicana
ENSAOCG00000002890	shrprbck1r	52	51.020	ENSPMEG00000023030	sharpin	89	51.020	Poecilia_mexicana
ENSAOCG00000002890	shrprbck1r	100	80.758	ENSPREG00000014689	shrprbck1r	100	80.758	Poecilia_reticulata
ENSAOCG00000002890	shrprbck1r	65	53.205	ENSPREG00000009702	sharpin	99	53.205	Poecilia_reticulata
ENSAOCG00000002890	shrprbck1r	100	86.275	ENSPNYG00000022601	shrprbck1r	100	86.555	Pundamilia_nyererei
ENSAOCG00000002890	shrprbck1r	55	56.522	ENSPNAG00000002911	sharpin	99	56.633	Pygocentrus_nattereri
ENSAOCG00000002890	shrprbck1r	100	70.451	ENSPNAG00000007847	shrprbck1r	100	70.588	Pygocentrus_nattereri
ENSAOCG00000002890	shrprbck1r	77	63.818	ENSSFOG00015014150	-	99	63.818	Scleropages_formosus
ENSAOCG00000002890	shrprbck1r	63	55.193	ENSSFOG00015004028	sharpin	99	56.400	Scleropages_formosus
ENSAOCG00000002890	shrprbck1r	100	82.940	ENSSMAG00000018085	shrprbck1r	100	82.940	Scophthalmus_maximus
ENSAOCG00000002890	shrprbck1r	60	46.727	ENSSDUG00000019039	sharpin	96	46.727	Seriola_dumerili
ENSAOCG00000002890	shrprbck1r	100	89.762	ENSSDUG00000002959	shrprbck1r	100	90.182	Seriola_dumerili
ENSAOCG00000002890	shrprbck1r	100	88.920	ENSSLDG00000009026	shrprbck1r	100	89.341	Seriola_lalandi_dorsalis
ENSAOCG00000002890	shrprbck1r	96	89.595	ENSSPAG00000016097	shrprbck1r	99	89.595	Stegastes_partitus
ENSAOCG00000002890	shrprbck1r	100	80.979	ENSTRUG00000006949	shrprbck1r	100	81.818	Takifugu_rubripes
ENSAOCG00000002890	shrprbck1r	60	53.846	ENSTRUG00000011046	sharpin	96	53.846	Takifugu_rubripes
ENSAOCG00000002890	shrprbck1r	55	58.853	ENSTNIG00000008521	sharpin	94	58.853	Tetraodon_nigroviridis
ENSAOCG00000002890	shrprbck1r	100	79.383	ENSXCOG00000006701	shrprbck1r	100	79.383	Xiphophorus_couchianus
ENSAOCG00000002890	shrprbck1r	52	56.250	ENSXCOG00000015019	sharpin	96	56.250	Xiphophorus_couchianus
ENSAOCG00000002890	shrprbck1r	65	53.105	ENSXMAG00000022076	sharpin	99	53.105	Xiphophorus_maculatus
ENSAOCG00000002890	shrprbck1r	100	79.102	ENSXMAG00000018972	shrprbck1r	100	79.102	Xiphophorus_maculatus