EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000003060 (Gene tree)
Gene ID: 111578429
Gene Symbol: sf3a1
Alias: si:dz150f13.2|wu:fc38e01|wu:fc50a11|wu:fj37c05
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 5322 bases
Position: chrNXFZ01003326.1:63327-68648
Accession: 111578429
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000000220	PRP21_like_P	PF12230.8	1.1e-51	1	1
ENSAOCP00000000220	Surp	PF01805.20	5.8e-46	1	2
ENSAOCP00000000220	Surp	PF01805.20	5.8e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000015292	-	2834	XM_023285242	ENSAOCP00000000220	786 (aa)	XP_023141010	UPI000C305236

Gene Model

Click here to download ENSAOCG00000003060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000003060's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000003060	sf3a1	99	85.290	ENSG00000099995	SF3A1	100	82.875	Homo_sapiens
ENSAOCG00000003060	sf3a1	100	99.491	ENSAPOG00000020465	sf3a1	100	99.491	Acanthochromis_polyacanthus
ENSAOCG00000003060	sf3a1	99	85.419	ENSAMEG00000007737	SF3A1	100	83.042	Ailuropoda_melanoleuca
ENSAOCG00000003060	sf3a1	100	96.692	ENSACIG00000020672	sf3a1	100	96.692	Amphilophus_citrinellus
ENSAOCG00000003060	sf3a1	100	99.873	ENSAPEG00000010735	sf3a1	100	99.873	Amphiprion_percula
ENSAOCG00000003060	sf3a1	97	96.732	ENSATEG00000021201	sf3a1	96	96.732	Anabas_testudineus
ENSAOCG00000003060	sf3a1	96	84.980	ENSAPLG00000009057	SF3A1	100	84.674	Anas_platyrhynchos
ENSAOCG00000003060	sf3a1	100	81.481	ENSACAG00000009415	SF3A1	100	82.099	Anolis_carolinensis
ENSAOCG00000003060	sf3a1	99	84.910	ENSANAG00000032045	SF3A1	100	83.250	Aotus_nancymaae
ENSAOCG00000003060	sf3a1	100	96.438	ENSACLG00000012622	sf3a1	100	96.438	Astatotilapia_calliptera
ENSAOCG00000003060	sf3a1	99	89.809	ENSAMXG00000005382	sf3a1	99	90.064	Astyanax_mexicanus
ENSAOCG00000003060	sf3a1	99	84.910	ENSBTAG00000003390	SF3A1	100	83.250	Bos_taurus
ENSAOCG00000003060	sf3a1	81	45.472	WBGene00004188	prp-21	59	50.508	Caenorhabditis_elegans
ENSAOCG00000003060	sf3a1	99	84.783	ENSCJAG00000010370	SF3A1	100	83.125	Callithrix_jacchus
ENSAOCG00000003060	sf3a1	99	84.910	ENSCAFG00000012559	SF3A1	100	83.250	Canis_familiaris
ENSAOCG00000003060	sf3a1	99	84.910	ENSCAFG00020000838	SF3A1	100	83.250	Canis_lupus_dingo
ENSAOCG00000003060	sf3a1	99	85.038	ENSCHIG00000018642	SF3A1	100	83.375	Capra_hircus
ENSAOCG00000003060	sf3a1	99	85.419	ENSTSYG00000004739	SF3A1	100	83.250	Carlito_syrichta
ENSAOCG00000003060	sf3a1	97	68.463	ENSCAPG00000015414	SF3A1	99	68.725	Cavia_aperea
ENSAOCG00000003060	sf3a1	99	84.910	ENSCPOG00000014589	SF3A1	100	83.250	Cavia_porcellus
ENSAOCG00000003060	sf3a1	99	84.910	ENSCCAG00000032006	SF3A1	100	83.250	Cebus_capucinus
ENSAOCG00000003060	sf3a1	99	84.783	ENSCATG00000029241	SF3A1	100	82.875	Cercocebus_atys
ENSAOCG00000003060	sf3a1	97	86.013	ENSCLAG00000006508	SF3A1	100	82.875	Chinchilla_lanigera
ENSAOCG00000003060	sf3a1	99	84.783	ENSCSAG00000009470	SF3A1	100	82.875	Chlorocebus_sabaeus
ENSAOCG00000003060	sf3a1	59	90.476	ENSCHOG00000005201	SF3A1	61	90.000	Choloepus_hoffmanni
ENSAOCG00000003060	sf3a1	100	82.219	ENSCPBG00000007595	SF3A1	100	82.219	Chrysemys_picta_bellii
ENSAOCG00000003060	sf3a1	92	63.158	ENSCSAVG00000005608	-	92	65.972	Ciona_savignyi
ENSAOCG00000003060	sf3a1	99	84.783	ENSCANG00000033564	SF3A1	100	82.875	Colobus_angolensis_palliatus
ENSAOCG00000003060	sf3a1	97	86.184	ENSCGRG00001008933	Sf3a1	100	83.145	Cricetulus_griseus_chok1gshd
ENSAOCG00000003060	sf3a1	97	86.184	ENSCGRG00000006127	Sf3a1	100	83.145	Cricetulus_griseus_crigri
ENSAOCG00000003060	sf3a1	100	92.386	ENSCSEG00000010792	sf3a1	100	92.386	Cynoglossus_semilaevis
ENSAOCG00000003060	sf3a1	100	92.884	ENSCVAG00000004560	sf3a1	100	92.884	Cyprinodon_variegatus
ENSAOCG00000003060	sf3a1	100	87.690	ENSDARG00000041887	sf3a1	100	90.909	Danio_rerio
ENSAOCG00000003060	sf3a1	99	85.567	ENSDNOG00000010629	SF3A1	98	83.904	Dasypus_novemcinctus
ENSAOCG00000003060	sf3a1	99	84.910	ENSDORG00000005613	Sf3a1	100	83.250	Dipodomys_ordii
ENSAOCG00000003060	sf3a1	83	61.582	FBgn0266917	Sf3a1	98	51.471	Drosophila_melanogaster
ENSAOCG00000003060	sf3a1	85	84.903	ENSETEG00000017194	SF3A1	95	85.501	Echinops_telfairi
ENSAOCG00000003060	sf3a1	97	68.467	ENSEBUG00000001285	sf3a1	95	70.013	Eptatretus_burgeri
ENSAOCG00000003060	sf3a1	99	84.910	ENSEASG00005010254	SF3A1	100	83.250	Equus_asinus_asinus
ENSAOCG00000003060	sf3a1	99	84.910	ENSECAG00000023962	SF3A1	100	83.250	Equus_caballus
ENSAOCG00000003060	sf3a1	74	91.803	ENSEEUG00000003159	SF3A1	83	91.803	Erinaceus_europaeus
ENSAOCG00000003060	sf3a1	100	87.452	ENSELUG00000022578	sf3a1	100	86.946	Esox_lucius
ENSAOCG00000003060	sf3a1	99	84.783	ENSFCAG00000011932	SF3A1	100	83.125	Felis_catus
ENSAOCG00000003060	sf3a1	96	84.433	ENSFALG00000006944	SF3A1	100	83.627	Ficedula_albicollis
ENSAOCG00000003060	sf3a1	99	85.290	ENSFDAG00000009560	SF3A1	100	82.875	Fukomys_damarensis
ENSAOCG00000003060	sf3a1	100	93.774	ENSFHEG00000010866	sf3a1	100	93.774	Fundulus_heteroclitus
ENSAOCG00000003060	sf3a1	100	88.295	ENSGMOG00000016024	sf3a1	100	88.295	Gadus_morhua
ENSAOCG00000003060	sf3a1	96	85.092	ENSGALG00000007937	SF3A1	100	83.879	Gallus_gallus
ENSAOCG00000003060	sf3a1	100	94.536	ENSGAFG00000009111	sf3a1	100	94.536	Gambusia_affinis
ENSAOCG00000003060	sf3a1	100	91.288	ENSGACG00000011893	sf3a1	100	90.783	Gasterosteus_aculeatus
ENSAOCG00000003060	sf3a1	96	81.711	ENSGAGG00000000762	SF3A1	99	81.711	Gopherus_agassizii
ENSAOCG00000003060	sf3a1	99	85.290	ENSGGOG00000012631	SF3A1	100	82.875	Gorilla_gorilla
ENSAOCG00000003060	sf3a1	100	96.438	ENSHBUG00000015795	sf3a1	100	96.438	Haplochromis_burtoni
ENSAOCG00000003060	sf3a1	99	84.783	ENSHGLG00000007907	SF3A1	100	83.125	Heterocephalus_glaber_female
ENSAOCG00000003060	sf3a1	99	84.783	ENSHGLG00100013799	SF3A1	100	83.125	Heterocephalus_glaber_male
ENSAOCG00000003060	sf3a1	100	89.962	ENSHCOG00000015423	sf3a1	100	89.708	Hippocampus_comes
ENSAOCG00000003060	sf3a1	98	86.788	ENSIPUG00000002470	sf3a1	98	87.630	Ictalurus_punctatus
ENSAOCG00000003060	sf3a1	97	86.013	ENSSTOG00000013892	SF3A1	100	83.522	Ictidomys_tridecemlineatus
ENSAOCG00000003060	sf3a1	99	85.290	ENSJJAG00000022566	Sf3a1	100	83.543	Jaculus_jaculus
ENSAOCG00000003060	sf3a1	100	93.639	ENSKMAG00000002400	sf3a1	100	93.639	Kryptolebias_marmoratus
ENSAOCG00000003060	sf3a1	100	93.511	ENSLBEG00000022974	sf3a1	100	93.130	Labrus_bergylta
ENSAOCG00000003060	sf3a1	100	84.197	ENSLACG00000003565	SF3A1	100	84.197	Latimeria_chalumnae
ENSAOCG00000003060	sf3a1	100	88.101	ENSLOCG00000008251	sf3a1	99	88.734	Lepisosteus_oculatus
ENSAOCG00000003060	sf3a1	99	85.294	ENSLAFG00000000448	SF3A1	100	83.375	Loxodonta_africana
ENSAOCG00000003060	sf3a1	97	56.589	ENSLAFG00000026032	-	97	56.170	Loxodonta_africana
ENSAOCG00000003060	sf3a1	99	84.655	ENSMFAG00000031979	SF3A1	100	82.750	Macaca_fascicularis
ENSAOCG00000003060	sf3a1	99	84.655	ENSMMUG00000005547	SF3A1	100	82.750	Macaca_mulatta
ENSAOCG00000003060	sf3a1	99	84.783	ENSMNEG00000037229	SF3A1	100	82.875	Macaca_nemestrina
ENSAOCG00000003060	sf3a1	99	84.783	ENSMLEG00000041908	SF3A1	100	82.875	Mandrillus_leucophaeus
ENSAOCG00000003060	sf3a1	99	96.031	ENSMAMG00000006460	sf3a1	98	96.031	Mastacembelus_armatus
ENSAOCG00000003060	sf3a1	100	96.438	ENSMZEG00005009633	sf3a1	100	96.438	Maylandia_zebra
ENSAOCG00000003060	sf3a1	96	85.092	ENSMGAG00000001330	SF3A1	100	84.852	Meleagris_gallopavo
ENSAOCG00000003060	sf3a1	93	81.880	ENSMAUG00000020317	Sf3a1	100	78.382	Mesocricetus_auratus
ENSAOCG00000003060	sf3a1	99	84.910	ENSMICG00000010038	SF3A1	100	82.250	Microcebus_murinus
ENSAOCG00000003060	sf3a1	97	85.752	ENSMOCG00000008438	Sf3a1	100	82.750	Microtus_ochrogaster
ENSAOCG00000003060	sf3a1	100	91.221	ENSMMOG00000015588	sf3a1	99	91.985	Mola_mola
ENSAOCG00000003060	sf3a1	99	83.162	ENSMODG00000009270	SF3A1	100	82.997	Monodelphis_domestica
ENSAOCG00000003060	sf3a1	100	94.937	ENSMALG00000000148	sf3a1	100	95.316	Monopterus_albus
ENSAOCG00000003060	sf3a1	99	84.576	MGP_CAROLIEiJ_G0016029	Sf3a1	99	83.038	Mus_caroli
ENSAOCG00000003060	sf3a1	99	84.576	ENSMUSG00000002129	Sf3a1	99	83.038	Mus_musculus
ENSAOCG00000003060	sf3a1	99	84.447	MGP_PahariEiJ_G0016862	Sf3a1	99	83.038	Mus_pahari
ENSAOCG00000003060	sf3a1	99	84.576	MGP_SPRETEiJ_G0016870	Sf3a1	99	83.038	Mus_spretus
ENSAOCG00000003060	sf3a1	99	84.271	ENSMPUG00000013144	SF3A1	100	83.125	Mustela_putorius_furo
ENSAOCG00000003060	sf3a1	99	84.783	ENSMLUG00000002139	SF3A1	100	83.396	Myotis_lucifugus
ENSAOCG00000003060	sf3a1	99	84.783	ENSNGAG00000016977	Sf3a1	100	83.000	Nannospalax_galili
ENSAOCG00000003060	sf3a1	100	95.939	ENSNBRG00000016642	sf3a1	100	95.939	Neolamprologus_brichardi
ENSAOCG00000003060	sf3a1	99	84.783	ENSNLEG00000003686	SF3A1	100	82.875	Nomascus_leucogenys
ENSAOCG00000003060	sf3a1	97	86.797	ENSOPRG00000016636	SF3A1	100	84.296	Ochotona_princeps
ENSAOCG00000003060	sf3a1	99	85.419	ENSODEG00000002571	SF3A1	100	83.123	Octodon_degus
ENSAOCG00000003060	sf3a1	100	96.819	ENSONIG00000010848	sf3a1	100	96.819	Oreochromis_niloticus
ENSAOCG00000003060	sf3a1	97	86.144	ENSOCUG00000007633	SF3A1	100	83.125	Oryctolagus_cuniculus
ENSAOCG00000003060	sf3a1	96	93.493	ENSORLG00000013050	sf3a1	99	93.227	Oryzias_latipes
ENSAOCG00000003060	sf3a1	99	91.037	ENSORLG00020003236	sf3a1	97	91.355	Oryzias_latipes_hni
ENSAOCG00000003060	sf3a1	100	93.130	ENSORLG00015017411	sf3a1	100	92.875	Oryzias_latipes_hsok
ENSAOCG00000003060	sf3a1	100	93.639	ENSOMEG00000013362	sf3a1	100	93.384	Oryzias_melastigma
ENSAOCG00000003060	sf3a1	99	85.548	ENSOGAG00000012931	SF3A1	100	83.125	Otolemur_garnettii
ENSAOCG00000003060	sf3a1	99	83.632	ENSOARG00000006849	SF3A1	100	81.875	Ovis_aries
ENSAOCG00000003060	sf3a1	99	84.516	ENSPPAG00000041790	SF3A1	100	82.125	Pan_paniscus
ENSAOCG00000003060	sf3a1	99	84.783	ENSPPRG00000004391	SF3A1	100	83.125	Panthera_pardus
ENSAOCG00000003060	sf3a1	99	85.161	ENSPTIG00000000844	SF3A1	99	84.645	Panthera_tigris_altaica
ENSAOCG00000003060	sf3a1	99	85.290	ENSPTRG00000014240	SF3A1	100	82.875	Pan_troglodytes
ENSAOCG00000003060	sf3a1	99	84.783	ENSPANG00000020772	SF3A1	100	82.875	Papio_anubis
ENSAOCG00000003060	sf3a1	82	91.209	ENSPSIG00000012803	SF3A1	99	91.209	Pelodiscus_sinensis
ENSAOCG00000003060	sf3a1	97	91.242	ENSPMGG00000023096	sf3a1	100	91.895	Periophthalmus_magnuspinnatus
ENSAOCG00000003060	sf3a1	97	86.053	ENSPEMG00000009494	Sf3a1	100	83.019	Peromyscus_maniculatus_bairdii
ENSAOCG00000003060	sf3a1	69	78.467	ENSPMAG00000007139	-	100	73.719	Petromyzon_marinus
ENSAOCG00000003060	sf3a1	97	84.837	ENSPCIG00000022692	SF3A1	100	83.375	Phascolarctos_cinereus
ENSAOCG00000003060	sf3a1	100	84.351	ENSPFOG00000016768	sf3a1	100	84.351	Poecilia_formosa
ENSAOCG00000003060	sf3a1	100	95.172	ENSPLAG00000017268	sf3a1	100	95.172	Poecilia_latipinna
ENSAOCG00000003060	sf3a1	96	94.887	ENSPMEG00000019811	sf3a1	100	94.887	Poecilia_mexicana
ENSAOCG00000003060	sf3a1	100	94.917	ENSPREG00000010347	sf3a1	100	94.917	Poecilia_reticulata
ENSAOCG00000003060	sf3a1	99	84.783	ENSPPYG00000011707	SF3A1	100	82.875	Pongo_abelii
ENSAOCG00000003060	sf3a1	58	84.762	ENSPCAG00000003266	SF3A1	57	84.762	Procavia_capensis
ENSAOCG00000003060	sf3a1	99	84.655	ENSPCOG00000026630	SF3A1	100	82.250	Propithecus_coquereli
ENSAOCG00000003060	sf3a1	95	85.542	ENSPVAG00000017719	SF3A1	94	85.810	Pteropus_vampyrus
ENSAOCG00000003060	sf3a1	100	96.438	ENSPNYG00000018706	sf3a1	100	96.438	Pundamilia_nyererei
ENSAOCG00000003060	sf3a1	99	89.936	ENSPNAG00000003721	sf3a1	99	89.682	Pygocentrus_nattereri
ENSAOCG00000003060	sf3a1	99	84.903	ENSRNOG00000005218	Sf3a1	99	83.100	Rattus_norvegicus
ENSAOCG00000003060	sf3a1	99	84.783	ENSRBIG00000032167	SF3A1	100	82.875	Rhinopithecus_bieti
ENSAOCG00000003060	sf3a1	99	84.783	ENSRROG00000044908	SF3A1	100	82.875	Rhinopithecus_roxellana
ENSAOCG00000003060	sf3a1	94	86.122	ENSSBOG00000021960	SF3A1	98	86.377	Saimiri_boliviensis_boliviensis
ENSAOCG00000003060	sf3a1	100	80.203	ENSSHAG00000003666	SF3A1	99	80.838	Sarcophilus_harrisii
ENSAOCG00000003060	sf3a1	100	90.013	ENSSFOG00015004579	sf3a1	100	90.898	Scleropages_formosus
ENSAOCG00000003060	sf3a1	100	91.858	ENSSMAG00000004275	sf3a1	100	91.349	Scophthalmus_maximus
ENSAOCG00000003060	sf3a1	100	96.692	ENSSDUG00000022219	sf3a1	100	96.692	Seriola_dumerili
ENSAOCG00000003060	sf3a1	100	96.692	ENSSLDG00000012642	sf3a1	100	96.692	Seriola_lalandi_dorsalis
ENSAOCG00000003060	sf3a1	97	83.137	ENSSARG00000005960	SF3A1	99	83.399	Sorex_araneus
ENSAOCG00000003060	sf3a1	97	84.286	ENSSPUG00000018863	SF3A1	100	83.024	Sphenodon_punctatus
ENSAOCG00000003060	sf3a1	100	98.346	ENSSPAG00000011856	sf3a1	100	98.346	Stegastes_partitus
ENSAOCG00000003060	sf3a1	99	84.271	ENSSSCG00000010002	SF3A1	100	83.125	Sus_scrofa
ENSAOCG00000003060	sf3a1	96	85.000	ENSTGUG00000010547	SF3A1	99	85.492	Taeniopygia_guttata
ENSAOCG00000003060	sf3a1	100	90.204	ENSTRUG00000006118	sf3a1	100	90.076	Takifugu_rubripes
ENSAOCG00000003060	sf3a1	62	88.848	ENSTNIG00000005713	sf3a1	88	88.496	Tetraodon_nigroviridis
ENSAOCG00000003060	sf3a1	98	79.167	ENSTBEG00000012771	SF3A1	100	77.610	Tupaia_belangeri
ENSAOCG00000003060	sf3a1	99	84.419	ENSTTRG00000001535	SF3A1	100	83.645	Tursiops_truncatus
ENSAOCG00000003060	sf3a1	99	82.746	ENSUAMG00000006750	SF3A1	99	82.242	Ursus_americanus
ENSAOCG00000003060	sf3a1	99	85.419	ENSUMAG00000016665	SF3A1	100	83.629	Ursus_maritimus
ENSAOCG00000003060	sf3a1	99	84.910	ENSVVUG00000003075	SF3A1	100	83.250	Vulpes_vulpes
ENSAOCG00000003060	sf3a1	100	79.026	ENSXETG00000016144	sf3a1	96	85.484	Xenopus_tropicalis
ENSAOCG00000003060	sf3a1	100	94.536	ENSXCOG00000015653	sf3a1	100	94.536	Xiphophorus_couchianus
ENSAOCG00000003060	sf3a1	100	94.790	ENSXMAG00000002753	sf3a1	100	94.790	Xiphophorus_maculatus