EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000003066 (Gene tree)
Gene ID: 111581444
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 89294 bases
Position: chrNXFZ01003718.1:236871-326164
Accession: 111581444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000019570	CPSF_A	PF03178.15	4.6e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000015284	-	4084	XM_023289613	ENSAOCP00000019570	1140 (aa)	XP_023145381	UPI000C31694B

Gene Model

Click here to download ENSAOCG00000003066's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000003066's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000003066	ddb1	100	91.053	ENSG00000167986	DDB1	100	96.575	Homo_sapiens
ENSAOCG00000003066	ddb1	98	99.641	ENSAPOG00000005036	ddb1	99	99.694	Acanthochromis_polyacanthus
ENSAOCG00000003066	ddb1	100	91.140	ENSAMEG00000016518	DDB1	100	91.140	Ailuropoda_melanoleuca
ENSAOCG00000003066	ddb1	86	98.571	ENSACIG00000020624	ddb1	99	98.571	Amphilophus_citrinellus
ENSAOCG00000003066	ddb1	100	99.825	ENSAPEG00000000092	ddb1	100	99.825	Amphiprion_percula
ENSAOCG00000003066	ddb1	94	98.977	ENSATEG00000020571	ddb1	97	98.977	Anabas_testudineus
ENSAOCG00000003066	ddb1	99	89.646	ENSAPLG00000007174	DDB1	99	89.646	Anas_platyrhynchos
ENSAOCG00000003066	ddb1	100	90.789	ENSACAG00000017758	DDB1	100	90.789	Anolis_carolinensis
ENSAOCG00000003066	ddb1	100	91.053	ENSANAG00000021878	DDB1	100	91.053	Aotus_nancymaae
ENSAOCG00000003066	ddb1	100	98.596	ENSACLG00000012401	ddb1	100	98.596	Astatotilapia_calliptera
ENSAOCG00000003066	ddb1	100	91.053	ENSBTAG00000021569	DDB1	93	91.053	Bos_taurus
ENSAOCG00000003066	ddb1	100	36.955	WBGene00010890	ddb-1	100	36.955	Caenorhabditis_elegans
ENSAOCG00000003066	ddb1	100	91.053	ENSCJAG00000019319	DDB1	100	91.053	Callithrix_jacchus
ENSAOCG00000003066	ddb1	100	91.140	ENSCAFG00000016264	DDB1	100	91.140	Canis_familiaris
ENSAOCG00000003066	ddb1	94	91.349	ENSCAFG00020012722	DDB1	99	91.349	Canis_lupus_dingo
ENSAOCG00000003066	ddb1	100	91.053	ENSCHIG00000014969	DDB1	100	91.053	Capra_hircus
ENSAOCG00000003066	ddb1	100	90.702	ENSTSYG00000008027	DDB1	100	90.702	Carlito_syrichta
ENSAOCG00000003066	ddb1	98	91.153	ENSCAPG00000010786	DDB1	100	91.153	Cavia_aperea
ENSAOCG00000003066	ddb1	100	91.140	ENSCPOG00000009956	DDB1	100	91.140	Cavia_porcellus
ENSAOCG00000003066	ddb1	100	91.053	ENSCCAG00000035883	DDB1	100	91.053	Cebus_capucinus
ENSAOCG00000003066	ddb1	100	88.628	ENSCATG00000044495	DDB1	100	88.628	Cercocebus_atys
ENSAOCG00000003066	ddb1	100	91.228	ENSCLAG00000004126	DDB1	100	91.228	Chinchilla_lanigera
ENSAOCG00000003066	ddb1	100	91.053	ENSCSAG00000006392	DDB1	100	91.053	Chlorocebus_sabaeus
ENSAOCG00000003066	ddb1	88	84.470	ENSCHOG00000011377	DDB1	90	84.470	Choloepus_hoffmanni
ENSAOCG00000003066	ddb1	100	90.877	ENSCPBG00000017728	DDB1	100	90.877	Chrysemys_picta_bellii
ENSAOCG00000003066	ddb1	100	61.198	ENSCING00000007437	-	100	61.198	Ciona_intestinalis
ENSAOCG00000003066	ddb1	94	60.369	ENSCSAVG00000004783	-	100	60.369	Ciona_savignyi
ENSAOCG00000003066	ddb1	100	91.053	ENSCANG00000019948	DDB1	100	91.053	Colobus_angolensis_palliatus
ENSAOCG00000003066	ddb1	100	91.140	ENSCGRG00001016599	Ddb1	100	91.140	Cricetulus_griseus_chok1gshd
ENSAOCG00000003066	ddb1	100	91.140	ENSCGRG00000013427	Ddb1	100	91.140	Cricetulus_griseus_crigri
ENSAOCG00000003066	ddb1	93	98.680	ENSCSEG00000012499	ddb1	99	96.964	Cynoglossus_semilaevis
ENSAOCG00000003066	ddb1	94	97.390	ENSCVAG00000019531	ddb1	99	97.390	Cyprinodon_variegatus
ENSAOCG00000003066	ddb1	100	92.732	ENSDARG00000074431	ddb1	100	92.732	Danio_rerio
ENSAOCG00000003066	ddb1	94	91.349	ENSDNOG00000014884	DDB1	97	91.349	Dasypus_novemcinctus
ENSAOCG00000003066	ddb1	84	95.000	ENSDORG00000000127	Ddb1	100	95.000	Dipodomys_ordii
ENSAOCG00000003066	ddb1	78	30.065	FBgn0024698	Cpsf160	68	30.065	Drosophila_melanogaster
ENSAOCG00000003066	ddb1	100	60.437	FBgn0260962	pic	100	60.437	Drosophila_melanogaster
ENSAOCG00000003066	ddb1	71	94.882	ENSETEG00000001053	-	71	94.882	Echinops_telfairi
ENSAOCG00000003066	ddb1	78	84.252	ENSEBUG00000014593	ddb1	97	84.252	Eptatretus_burgeri
ENSAOCG00000003066	ddb1	100	91.140	ENSEASG00005008184	DDB1	100	91.140	Equus_asinus_asinus
ENSAOCG00000003066	ddb1	100	91.140	ENSECAG00000012136	DDB1	100	91.140	Equus_caballus
ENSAOCG00000003066	ddb1	85	87.205	ENSEEUG00000003194	DDB1	85	87.205	Erinaceus_europaeus
ENSAOCG00000003066	ddb1	100	97.281	ENSELUG00000023868	ddb1	100	97.281	Esox_lucius
ENSAOCG00000003066	ddb1	100	91.140	ENSFCAG00000029716	DDB1	100	91.140	Felis_catus
ENSAOCG00000003066	ddb1	100	90.289	ENSFALG00000011981	DDB1	100	90.289	Ficedula_albicollis
ENSAOCG00000003066	ddb1	100	91.053	ENSFDAG00000005128	DDB1	100	91.053	Fukomys_damarensis
ENSAOCG00000003066	ddb1	90	96.471	ENSFHEG00000022133	ddb1	99	96.471	Fundulus_heteroclitus
ENSAOCG00000003066	ddb1	79	98.328	ENSGMOG00000019386	ddb1	94	98.328	Gadus_morhua
ENSAOCG00000003066	ddb1	100	90.789	ENSGALG00000042333	DDB1	100	90.789	Gallus_gallus
ENSAOCG00000003066	ddb1	94	98.229	ENSGAFG00000013142	ddb1	99	98.229	Gambusia_affinis
ENSAOCG00000003066	ddb1	96	97.342	ENSGACG00000017182	ddb1	100	97.342	Gasterosteus_aculeatus
ENSAOCG00000003066	ddb1	95	90.683	ENSGAGG00000014124	DDB1	100	90.683	Gopherus_agassizii
ENSAOCG00000003066	ddb1	100	91.053	ENSGGOG00000004052	DDB1	100	91.053	Gorilla_gorilla
ENSAOCG00000003066	ddb1	100	98.596	ENSHBUG00000008873	ddb1	100	98.596	Haplochromis_burtoni
ENSAOCG00000003066	ddb1	100	91.053	ENSHGLG00000018430	DDB1	100	91.053	Heterocephalus_glaber_female
ENSAOCG00000003066	ddb1	100	90.088	ENSHGLG00100014475	DDB1	100	90.088	Heterocephalus_glaber_male
ENSAOCG00000003066	ddb1	94	98.048	ENSHCOG00000018670	ddb1	98	98.048	Hippocampus_comes
ENSAOCG00000003066	ddb1	100	96.404	ENSIPUG00000005612	DDB1	100	96.404	Ictalurus_punctatus
ENSAOCG00000003066	ddb1	100	91.053	ENSSTOG00000007552	DDB1	100	91.053	Ictidomys_tridecemlineatus
ENSAOCG00000003066	ddb1	100	90.965	ENSJJAG00000017769	Ddb1	100	90.965	Jaculus_jaculus
ENSAOCG00000003066	ddb1	94	98.136	ENSKMAG00000002315	ddb1	99	98.136	Kryptolebias_marmoratus
ENSAOCG00000003066	ddb1	84	99.063	ENSLBEG00000017065	ddb1	99	99.063	Labrus_bergylta
ENSAOCG00000003066	ddb1	100	90.806	ENSLACG00000017611	DDB1	100	90.806	Latimeria_chalumnae
ENSAOCG00000003066	ddb1	92	88.432	ENSLOCG00000000012	ddb1	100	88.432	Lepisosteus_oculatus
ENSAOCG00000003066	ddb1	100	90.965	ENSLAFG00000011513	DDB1	100	90.965	Loxodonta_africana
ENSAOCG00000003066	ddb1	100	91.053	ENSMFAG00000042035	DDB1	100	91.053	Macaca_fascicularis
ENSAOCG00000003066	ddb1	99	91.070	ENSMMUG00000002691	DDB1	100	90.789	Macaca_mulatta
ENSAOCG00000003066	ddb1	100	91.053	ENSMNEG00000031559	DDB1	100	91.053	Macaca_nemestrina
ENSAOCG00000003066	ddb1	100	91.053	ENSMLEG00000044136	DDB1	100	91.053	Mandrillus_leucophaeus
ENSAOCG00000003066	ddb1	100	99.386	ENSMAMG00000014372	ddb1	100	99.386	Mastacembelus_armatus
ENSAOCG00000003066	ddb1	100	98.509	ENSMZEG00005013835	ddb1	100	98.509	Maylandia_zebra
ENSAOCG00000003066	ddb1	94	89.944	ENSMGAG00000004990	DDB1	100	89.944	Meleagris_gallopavo
ENSAOCG00000003066	ddb1	100	91.140	ENSMAUG00000012926	Ddb1	100	91.140	Mesocricetus_auratus
ENSAOCG00000003066	ddb1	100	91.228	ENSMICG00000013703	DDB1	100	91.228	Microcebus_murinus
ENSAOCG00000003066	ddb1	100	91.053	ENSMOCG00000020499	Ddb1	100	91.053	Microtus_ochrogaster
ENSAOCG00000003066	ddb1	86	99.184	ENSMMOG00000001758	ddb1	99	99.184	Mola_mola
ENSAOCG00000003066	ddb1	100	82.266	ENSMODG00000020353	DDB1	100	82.266	Monodelphis_domestica
ENSAOCG00000003066	ddb1	100	99.298	ENSMALG00000014071	ddb1	100	99.298	Monopterus_albus
ENSAOCG00000003066	ddb1	100	91.140	MGP_CAROLIEiJ_G0022695	Ddb1	100	91.140	Mus_caroli
ENSAOCG00000003066	ddb1	100	91.228	ENSMUSG00000024740	Ddb1	100	91.228	Mus_musculus
ENSAOCG00000003066	ddb1	100	91.140	MGP_PahariEiJ_G0014189	Ddb1	100	91.140	Mus_pahari
ENSAOCG00000003066	ddb1	100	91.228	MGP_SPRETEiJ_G0023609	Ddb1	100	91.228	Mus_spretus
ENSAOCG00000003066	ddb1	100	88.070	ENSMPUG00000014200	DDB1	100	88.070	Mustela_putorius_furo
ENSAOCG00000003066	ddb1	100	91.228	ENSMLUG00000013232	DDB1	100	91.228	Myotis_lucifugus
ENSAOCG00000003066	ddb1	100	91.053	ENSNGAG00000009384	Ddb1	100	91.053	Nannospalax_galili
ENSAOCG00000003066	ddb1	100	98.684	ENSNBRG00000019581	ddb1	100	98.684	Neolamprologus_brichardi
ENSAOCG00000003066	ddb1	100	88.194	ENSNLEG00000002022	DDB1	100	88.194	Nomascus_leucogenys
ENSAOCG00000003066	ddb1	90	94.014	ENSMEUG00000001099	DDB1	93	94.014	Notamacropus_eugenii
ENSAOCG00000003066	ddb1	90	82.444	ENSOPRG00000008254	DDB1	90	82.444	Ochotona_princeps
ENSAOCG00000003066	ddb1	100	91.228	ENSODEG00000002419	DDB1	100	91.228	Octodon_degus
ENSAOCG00000003066	ddb1	100	98.684	ENSONIG00000005804	ddb1	100	98.684	Oreochromis_niloticus
ENSAOCG00000003066	ddb1	91	90.795	ENSOANG00000004897	DDB1	100	90.795	Ornithorhynchus_anatinus
ENSAOCG00000003066	ddb1	100	91.053	ENSOCUG00000001667	DDB1	100	91.053	Oryctolagus_cuniculus
ENSAOCG00000003066	ddb1	96	96.242	ENSORLG00000001399	ddb1	98	97.502	Oryzias_latipes
ENSAOCG00000003066	ddb1	96	96.150	ENSORLG00020001277	ddb1	97	96.150	Oryzias_latipes_hni
ENSAOCG00000003066	ddb1	94	97.395	ENSORLG00015002080	ddb1	99	97.395	Oryzias_latipes_hsok
ENSAOCG00000003066	ddb1	96	95.898	ENSOMEG00000006181	ddb1	99	95.898	Oryzias_melastigma
ENSAOCG00000003066	ddb1	100	91.228	ENSOGAG00000016103	DDB1	100	91.228	Otolemur_garnettii
ENSAOCG00000003066	ddb1	99	91.273	ENSOARG00000011716	DDB1	98	91.273	Ovis_aries
ENSAOCG00000003066	ddb1	100	91.053	ENSPPAG00000035343	DDB1	100	91.053	Pan_paniscus
ENSAOCG00000003066	ddb1	100	91.140	ENSPPRG00000013300	DDB1	100	91.140	Panthera_pardus
ENSAOCG00000003066	ddb1	98	91.153	ENSPTIG00000006909	DDB1	98	91.153	Panthera_tigris_altaica
ENSAOCG00000003066	ddb1	100	91.053	ENSPTRG00000003737	DDB1	100	91.053	Pan_troglodytes
ENSAOCG00000003066	ddb1	100	91.053	ENSPANG00000000242	DDB1	100	91.053	Papio_anubis
ENSAOCG00000003066	ddb1	94	96.459	ENSPKIG00000019213	ddb1	94	96.459	Paramormyrops_kingsleyae
ENSAOCG00000003066	ddb1	98	90.302	ENSPSIG00000013275	DDB1	100	90.302	Pelodiscus_sinensis
ENSAOCG00000003066	ddb1	86	98.776	ENSPMGG00000021179	ddb1	99	98.776	Periophthalmus_magnuspinnatus
ENSAOCG00000003066	ddb1	100	91.140	ENSPEMG00000012241	Ddb1	100	91.140	Peromyscus_maniculatus_bairdii
ENSAOCG00000003066	ddb1	89	86.640	ENSPMAG00000008479	ddb1	100	86.640	Petromyzon_marinus
ENSAOCG00000003066	ddb1	100	91.316	ENSPCIG00000002643	DDB1	100	91.316	Phascolarctos_cinereus
ENSAOCG00000003066	ddb1	100	98.072	ENSPFOG00000002768	ddb1	100	98.072	Poecilia_formosa
ENSAOCG00000003066	ddb1	100	97.895	ENSPLAG00000017227	ddb1	100	97.895	Poecilia_latipinna
ENSAOCG00000003066	ddb1	100	97.895	ENSPMEG00000011398	ddb1	100	97.895	Poecilia_mexicana
ENSAOCG00000003066	ddb1	94	98.140	ENSPREG00000004440	ddb1	98	98.140	Poecilia_reticulata
ENSAOCG00000003066	ddb1	100	86.911	ENSPPYG00000003193	DDB1	100	86.911	Pongo_abelii
ENSAOCG00000003066	ddb1	85	88.955	ENSPCAG00000011040	DDB1	85	88.955	Procavia_capensis
ENSAOCG00000003066	ddb1	100	90.018	ENSPCOG00000015176	DDB1	100	90.018	Propithecus_coquereli
ENSAOCG00000003066	ddb1	100	90.965	ENSPVAG00000003847	DDB1	100	90.965	Pteropus_vampyrus
ENSAOCG00000003066	ddb1	94	96.831	ENSPNAG00000006635	ddb1	97	96.831	Pygocentrus_nattereri
ENSAOCG00000003066	ddb1	100	91.228	ENSRNOG00000020715	Ddb1	100	91.228	Rattus_norvegicus
ENSAOCG00000003066	ddb1	100	91.053	ENSRBIG00000033611	DDB1	100	91.053	Rhinopithecus_bieti
ENSAOCG00000003066	ddb1	100	91.053	ENSRROG00000041407	DDB1	100	91.053	Rhinopithecus_roxellana
ENSAOCG00000003066	ddb1	100	91.140	ENSSBOG00000019775	DDB1	100	91.140	Saimiri_boliviensis_boliviensis
ENSAOCG00000003066	ddb1	94	88.785	ENSSHAG00000011600	DDB1	100	88.785	Sarcophilus_harrisii
ENSAOCG00000003066	ddb1	94	96.468	ENSSFOG00015011151	ddb1	97	96.468	Scleropages_formosus
ENSAOCG00000003066	ddb1	100	99.035	ENSSMAG00000009495	ddb1	100	99.035	Scophthalmus_maximus
ENSAOCG00000003066	ddb1	100	99.386	ENSSDUG00000004642	ddb1	100	99.386	Seriola_dumerili
ENSAOCG00000003066	ddb1	100	99.386	ENSSLDG00000015804	ddb1	100	99.386	Seriola_lalandi_dorsalis
ENSAOCG00000003066	ddb1	70	94.340	ENSSARG00000003290	-	72	94.340	Sorex_araneus
ENSAOCG00000003066	ddb1	100	90.965	ENSSPUG00000019338	DDB1	100	90.965	Sphenodon_punctatus
ENSAOCG00000003066	ddb1	94	99.442	ENSSPAG00000009888	ddb1	99	99.442	Stegastes_partitus
ENSAOCG00000003066	ddb1	100	90.175	ENSSSCG00000013094	DDB1	100	90.175	Sus_scrofa
ENSAOCG00000003066	ddb1	100	90.351	ENSTGUG00000006414	DDB1	100	90.351	Taeniopygia_guttata
ENSAOCG00000003066	ddb1	94	97.577	ENSTRUG00000016682	ddb1	98	97.577	Takifugu_rubripes
ENSAOCG00000003066	ddb1	88	92.615	ENSTNIG00000009565	ddb1	99	92.615	Tetraodon_nigroviridis
ENSAOCG00000003066	ddb1	92	85.509	ENSTTRG00000011055	DDB1	94	85.509	Tursiops_truncatus
ENSAOCG00000003066	ddb1	94	91.349	ENSUAMG00000017793	DDB1	93	91.349	Ursus_americanus
ENSAOCG00000003066	ddb1	94	91.349	ENSUMAG00000011788	DDB1	98	91.349	Ursus_maritimus
ENSAOCG00000003066	ddb1	90	86.457	ENSVPAG00000007963	DDB1	92	86.457	Vicugna_pacos
ENSAOCG00000003066	ddb1	100	91.140	ENSVVUG00000004987	DDB1	100	91.140	Vulpes_vulpes
ENSAOCG00000003066	ddb1	100	88.724	ENSXETG00000008820	ddb1	100	88.724	Xenopus_tropicalis
ENSAOCG00000003066	ddb1	86	98.163	ENSXCOG00000013956	ddb1	99	98.163	Xiphophorus_couchianus
ENSAOCG00000003066	ddb1	94	98.043	ENSXMAG00000000022	ddb1	99	98.043	Xiphophorus_maculatus