EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000003277 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 42551 bases
Position: chrNXFZ01006286.1:8068-50618
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000000440	zf-C2H2	PF00096.26	9.9e-65	1	11
ENSAOCP00000000440	zf-C2H2	PF00096.26	9.9e-65	2	11
ENSAOCP00000000440	zf-C2H2	PF00096.26	9.9e-65	3	11
ENSAOCP00000000440	zf-C2H2	PF00096.26	9.9e-65	4	11
ENSAOCP00000000440	zf-C2H2	PF00096.26	9.9e-65	5	11
ENSAOCP00000000440	zf-C2H2	PF00096.26	9.9e-65	6	11
ENSAOCP00000000440	zf-C2H2	PF00096.26	9.9e-65	7	11
ENSAOCP00000000440	zf-C2H2	PF00096.26	9.9e-65	8	11
ENSAOCP00000000440	zf-C2H2	PF00096.26	9.9e-65	9	11
ENSAOCP00000000440	zf-C2H2	PF00096.26	9.9e-65	10	11
ENSAOCP00000000440	zf-C2H2	PF00096.26	9.9e-65	11	11
ENSAOCP00000000444	zf-C2H2	PF00096.26	1.3e-14	1	2
ENSAOCP00000000444	zf-C2H2	PF00096.26	1.3e-14	2	2
ENSAOCP00000000444	zf-met	PF12874.7	5.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000014930	-	1623	-	ENSAOCP00000000440	540 (aa)	-	-
ENSAOCT00000014934	-	261	-	ENSAOCP00000000444	86 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000003277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000003277's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000003277	-	97	51.667	ENSAOCG00000012813	-	97	44.980
ENSAOCG00000003277	-	90	51.923	ENSAOCG00000015944	-	77	38.971
ENSAOCG00000003277	-	88	47.222	ENSAOCG00000000655	-	91	47.222
ENSAOCG00000003277	-	70	66.667	ENSAOCG00000016088	-	90	56.081
ENSAOCG00000003277	-	81	43.396	ENSAOCG00000010863	sall3a	54	53.061
ENSAOCG00000003277	-	70	46.552	ENSAOCG00000023304	-	51	40.909
ENSAOCG00000003277	-	91	48.558	ENSAOCG00000013951	-	88	48.558
ENSAOCG00000003277	-	91	52.653	ENSAOCG00000009970	-	86	42.857
ENSAOCG00000003277	-	74	73.333	ENSAOCG00000024281	-	86	73.333
ENSAOCG00000003277	-	59	52.941	ENSAOCG00000010460	zgc:171929	64	36.842
ENSAOCG00000003277	-	89	45.625	ENSAOCG00000002795	-	92	35.526
ENSAOCG00000003277	-	94	48.148	ENSAOCG00000022004	znf236	70	37.681
ENSAOCG00000003277	-	74	66.667	ENSAOCG00000015586	-	85	66.667
ENSAOCG00000003277	-	83	44.231	ENSAOCG00000013589	-	88	42.174
ENSAOCG00000003277	-	88	58.582	ENSAOCG00000018307	-	87	68.421
ENSAOCG00000003277	-	80	56.897	ENSAOCG00000007045	-	87	41.944
ENSAOCG00000003277	-	93	58.743	ENSAOCG00000018543	-	85	68.333
ENSAOCG00000003277	-	76	56.000	ENSAOCG00000010954	-	96	39.655
ENSAOCG00000003277	-	72	53.846	ENSAOCG00000024256	-	90	54.878
ENSAOCG00000003277	-	90	50.000	ENSAOCG00000013124	-	75	49.080
ENSAOCG00000003277	-	91	58.462	ENSAOCG00000002585	-	93	55.596
ENSAOCG00000003277	-	91	51.852	ENSAOCG00000014651	-	82	51.852
ENSAOCG00000003277	-	83	38.028	ENSAOCG00000019850	si:ch211-216l23.1	96	39.041
ENSAOCG00000003277	-	83	64.516	ENSAOCG00000014165	-	97	55.682
ENSAOCG00000003277	-	88	40.312	ENSAOCG00000016897	-	84	37.452
ENSAOCG00000003277	-	95	38.291	ENSAOCG00000017602	-	93	52.229
ENSAOCG00000003277	-	78	57.407	ENSAOCG00000016409	-	59	57.407
ENSAOCG00000003277	-	77	57.895	ENSAOCG00000007388	-	74	41.975
ENSAOCG00000003277	-	90	50.467	ENSAOCG00000013578	-	97	51.698
ENSAOCG00000003277	-	91	64.912	ENSAOCG00000013130	-	79	64.912
ENSAOCG00000003277	-	63	34.167	ENSAOCG00000018972	znf131	51	34.167
ENSAOCG00000003277	-	98	52.727	ENSAOCG00000013978	-	87	52.632
ENSAOCG00000003277	-	75	48.980	ENSAOCG00000000960	znf341	54	48.214
ENSAOCG00000003277	-	71	58.824	ENSAOCG00000012903	-	83	43.934
ENSAOCG00000003277	-	84	65.455	ENSAOCG00000016737	-	98	65.455
ENSAOCG00000003277	-	85	46.154	ENSAOCG00000013656	-	68	40.252
ENSAOCG00000003277	-	88	71.875	ENSAOCG00000022459	-	99	57.919
ENSAOCG00000003277	-	78	47.273	ENSAOCG00000014818	znf319b	82	36.364
ENSAOCG00000003277	-	91	45.050	ENSAOCG00000000463	-	73	45.050
ENSAOCG00000003277	-	66	48.889	ENSAOCG00000008304	zbtb48	58	39.691
ENSAOCG00000003277	-	84	53.704	ENSAOCG00000012823	-	85	43.750
ENSAOCG00000003277	-	94	47.368	ENSAOCG00000012829	-	74	47.368
ENSAOCG00000003277	-	88	59.799	ENSAOCG00000000570	-	97	57.820
ENSAOCG00000003277	-	71	45.455	ENSAOCG00000022926	-	62	37.056
ENSAOCG00000003277	-	88	66.667	ENSAOCG00000022375	-	94	50.532
ENSAOCG00000003277	-	92	44.037	ENSAOCG00000021436	-	66	44.037
ENSAOCG00000003277	-	73	48.148	ENSAOCG00000001341	-	89	39.017
ENSAOCG00000003277	-	85	56.705	ENSAOCG00000006793	-	99	47.706
ENSAOCG00000003277	-	77	52.632	ENSAOCG00000010471	-	81	34.292
ENSAOCG00000003277	-	66	47.273	ENSAOCG00000018579	-	82	40.860
ENSAOCG00000003277	-	90	62.821	ENSAOCG00000022675	-	99	63.043
ENSAOCG00000003277	-	73	50.000	ENSAOCG00000022283	-	83	50.000
ENSAOCG00000003277	-	94	44.980	ENSAOCG00000020624	-	87	44.980
ENSAOCG00000003277	-	84	54.386	ENSAOCG00000015987	-	76	43.089
ENSAOCG00000003277	-	78	51.852	ENSAOCG00000004564	-	80	51.852
ENSAOCG00000003277	-	81	59.259	ENSAOCG00000016905	-	99	37.302
ENSAOCG00000003277	-	77	66.667	ENSAOCG00000016287	-	91	54.464
ENSAOCG00000003277	-	76	51.923	ENSAOCG00000019475	-	73	50.000
ENSAOCG00000003277	-	84	61.494	ENSAOCG00000013672	-	97	66.667
ENSAOCG00000003277	-	94	43.396	ENSAOCG00000012062	znf646	93	41.538
ENSAOCG00000003277	-	88	51.795	ENSAOCG00000017588	-	88	51.795
ENSAOCG00000003277	-	79	45.283	ENSAOCG00000015241	PRDM15	54	33.152
ENSAOCG00000003277	-	70	44.898	ENSAOCG00000009098	-	50	31.609
ENSAOCG00000003277	-	98	70.909	ENSAOCG00000015369	-	98	71.186
ENSAOCG00000003277	-	92	45.455	ENSAOCG00000001971	-	92	45.455
ENSAOCG00000003277	-	78	38.136	ENSAOCG00000006744	-	90	38.136
ENSAOCG00000003277	-	94	46.063	ENSAOCG00000010498	-	90	42.045
ENSAOCG00000003277	-	78	53.704	ENSAOCG00000012653	-	79	53.704
ENSAOCG00000003277	-	74	40.000	ENSAOCG00000017968	snai2	74	40.000
ENSAOCG00000003277	-	72	48.148	ENSAOCG00000021187	gfi1b	50	48.148
ENSAOCG00000003277	-	92	47.445	ENSAOCG00000007134	-	90	47.445
ENSAOCG00000003277	-	94	53.529	ENSAOCG00000022529	-	96	53.529
ENSAOCG00000003277	-	93	45.763	ENSAOCG00000001325	-	67	44.444
ENSAOCG00000003277	-	69	44.444	ENSAOCG00000001327	-	87	37.436
ENSAOCG00000003277	-	91	46.263	ENSAOCG00000002430	-	97	41.525
ENSAOCG00000003277	-	69	50.847	ENSAOCG00000005965	-	71	46.032
ENSAOCG00000003277	-	70	44.828	ENSAOCG00000021557	scrt2	51	40.580
ENSAOCG00000003277	-	90	51.923	ENSAOCG00000014769	-	80	38.971
ENSAOCG00000003277	-	79	53.846	ENSAOCG00000007347	-	79	51.786
ENSAOCG00000003277	-	73	50.000	ENSAOCG00000001615	-	81	50.000
ENSAOCG00000003277	-	79	50.943	ENSAOCG00000022836	-	67	50.943
ENSAOCG00000003277	-	98	55.882	ENSAOCG00000013934	-	92	43.466
ENSAOCG00000003277	-	88	57.848	ENSAOCG00000011204	-	73	56.061
ENSAOCG00000003277	-	78	50.820	ENSAOCG00000005450	ZNF319	89	38.793
ENSAOCG00000003277	-	90	55.363	ENSAOCG00000018484	-	91	66.667
ENSAOCG00000003277	-	71	46.296	ENSAOCG00000019753	-	76	35.256
ENSAOCG00000003277	-	94	50.355	ENSAOCG00000007146	-	81	50.355
ENSAOCG00000003277	-	72	49.123	ENSAOCG00000021565	-	95	41.317
ENSAOCG00000003277	-	77	64.815	ENSAOCG00000022276	-	94	64.815
ENSAOCG00000003277	-	92	47.312	ENSAOCG00000020652	-	91	47.312
ENSAOCG00000003277	-	80	63.636	ENSAOCG00000013710	-	98	56.022
ENSAOCG00000003277	-	86	56.364	ENSAOCG00000003494	si:dkey-7i4.5	93	56.364
ENSAOCG00000003277	-	92	54.469	ENSAOCG00000022079	-	99	51.613
ENSAOCG00000003277	-	83	39.860	ENSAOCG00000003910	scrt1b	82	39.860
ENSAOCG00000003277	-	91	64.815	ENSAOCG00000020830	-	96	64.912
ENSAOCG00000003277	-	71	48.148	ENSAOCG00000004559	-	87	48.148
ENSAOCG00000003277	-	97	49.180	ENSAOCG00000014806	prdm5	84	37.537
ENSAOCG00000003277	-	92	40.499	ENSAOCG00000017595	-	92	40.691
ENSAOCG00000003277	-	78	62.500	ENSAOCG00000000448	-	96	58.525

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000003277	-	88	66.667	ENSACIG00000017647	-	99	59.028	Amphilophus_citrinellus
ENSAOCG00000003277	-	78	53.704	ENSAPEG00000016601	-	80	53.704	Amphiprion_percula
ENSAOCG00000003277	-	84	53.659	ENSACLG00000015989	-	90	42.561	Astatotilapia_calliptera
ENSAOCG00000003277	-	86	54.822	ENSACLG00000005615	-	86	54.822	Astatotilapia_calliptera
ENSAOCG00000003277	-	72	52.632	ENSCSAVG00000002179	-	98	52.632	Ciona_savignyi
ENSAOCG00000003277	-	93	56.364	ENSCGRG00001004047	-	78	45.181	Cricetulus_griseus_chok1gshd
ENSAOCG00000003277	-	78	55.556	ENSCSEG00000001771	-	79	44.551	Cynoglossus_semilaevis
ENSAOCG00000003277	-	70	44.643	ENSEBUG00000002537	-	86	53.571	Eptatretus_burgeri
ENSAOCG00000003277	-	74	49.123	ENSEBUG00000002589	-	77	46.018	Eptatretus_burgeri
ENSAOCG00000003277	-	69	42.907	ENSEBUG00000011244	-	88	44.628	Eptatretus_burgeri
ENSAOCG00000003277	-	86	54.822	ENSHBUG00000020071	-	86	54.822	Haplochromis_burtoni
ENSAOCG00000003277	-	81	61.364	ENSHBUG00000012758	-	99	52.234	Haplochromis_burtoni
ENSAOCG00000003277	-	84	50.000	ENSHBUG00000016546	-	66	42.813	Haplochromis_burtoni
ENSAOCG00000003277	-	86	42.063	ENSMZEG00005020731	-	99	42.063	Maylandia_zebra
ENSAOCG00000003277	-	84	50.000	ENSMZEG00005027844	-	66	42.813	Maylandia_zebra
ENSAOCG00000003277	-	70	61.404	MGP_SPRETEiJ_G0030709	-	83	61.404	Mus_spretus
ENSAOCG00000003277	-	85	57.065	ENSNBRG00000023229	-	98	57.065	Neolamprologus_brichardi
ENSAOCG00000003277	-	73	52.632	ENSONIG00000006238	-	99	46.512	Oreochromis_niloticus
ENSAOCG00000003277	-	70	51.852	ENSONIG00000018188	-	100	41.779	Oreochromis_niloticus
ENSAOCG00000003277	-	84	50.000	ENSONIG00000014100	-	89	43.034	Oreochromis_niloticus
ENSAOCG00000003277	-	80	68.571	ENSPFOG00000007708	-	100	39.884	Poecilia_formosa
ENSAOCG00000003277	-	95	50.661	ENSPLAG00000010448	-	84	46.460	Poecilia_latipinna
ENSAOCG00000003277	-	79	49.091	ENSPMEG00000021030	-	52	35.556	Poecilia_mexicana
ENSAOCG00000003277	-	77	59.649	ENSPCAG00000001613	-	81	42.151	Procavia_capensis
ENSAOCG00000003277	-	84	53.659	ENSPNYG00000005671	-	83	44.086	Pundamilia_nyererei
ENSAOCG00000003277	-	90	58.182	ENSPNAG00000015131	-	94	54.315	Pygocentrus_nattereri
ENSAOCG00000003277	-	80	54.545	ENSSFOG00015000652	ZNF775	84	54.545	Scleropages_formosus
ENSAOCG00000003277	-	79	51.786	ENSSDUG00000020595	-	97	42.105	Seriola_dumerili
ENSAOCG00000003277	-	77	53.704	ENSSDUG00000004089	-	98	45.133	Seriola_dumerili
ENSAOCG00000003277	-	81	66.667	ENSSDUG00000005401	-	96	57.006	Seriola_dumerili
ENSAOCG00000003277	-	81	59.322	ENSSPUG00000007064	-	97	59.322	Sphenodon_punctatus
ENSAOCG00000003277	-	76	66.667	ENSSPAG00000009587	-	94	66.667	Stegastes_partitus
ENSAOCG00000003277	-	80	54.098	ENSSSCG00000032098	-	70	54.098	Sus_scrofa
ENSAOCG00000003277	-	77	52.632	ENSTTRG00000004891	-	81	48.558	Tursiops_truncatus
ENSAOCG00000003277	-	85	55.556	ENSXETG00000030967	-	98	55.556	Xenopus_tropicalis
ENSAOCG00000003277	-	74	51.786	ENSXETG00000015125	-	97	40.407	Xenopus_tropicalis