EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000003318 (Gene tree)
Gene ID: 111580160
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 10614 bases
Position: chrNXFZ01003543.1:41177-51790
Accession: 111580160
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000019728	HRDC	PF00570.23	6.5e-15	1	1
ENSAOCP00000019728	BDHCT	PF08072.11	6.8e-19	1	1
ENSAOCP00000019728	DEAD	PF00270.29	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000014872	-	4650	XM_023287775	ENSAOCP00000019728	1376 (aa)	XP_023143543	UPI000C3068A0

Gene Model

Click here to download ENSAOCG00000003318's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000003318's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000003318	blm	57	65.565	ENSG00000197299	BLM	50	73.361	Homo_sapiens
ENSAOCG00000003318	blm	100	88.842	ENSAPOG00000017966	blm	100	88.701	Acanthochromis_polyacanthus
ENSAOCG00000003318	blm	57	64.422	ENSAMEG00000013843	BLM	55	64.295	Ailuropoda_melanoleuca
ENSAOCG00000003318	blm	100	74.544	ENSACIG00000023762	blm	100	74.123	Amphilophus_citrinellus
ENSAOCG00000003318	blm	100	96.515	ENSAPEG00000018105	blm	100	96.515	Amphiprion_percula
ENSAOCG00000003318	blm	99	77.071	ENSATEG00000006421	blm	100	76.929	Anabas_testudineus
ENSAOCG00000003318	blm	81	52.632	ENSAPLG00000006878	BLM	97	52.003	Anas_platyrhynchos
ENSAOCG00000003318	blm	57	65.201	ENSACAG00000014275	BLM	55	64.855	Anolis_carolinensis
ENSAOCG00000003318	blm	57	65.863	ENSANAG00000038415	BLM	50	72.951	Aotus_nancymaae
ENSAOCG00000003318	blm	100	75.387	ENSACLG00000020354	blm	100	74.492	Astatotilapia_calliptera
ENSAOCG00000003318	blm	99	57.074	ENSAMXG00000016970	blm	99	57.668	Astyanax_mexicanus
ENSAOCG00000003318	blm	57	65.947	ENSCJAG00000009803	BLM	50	73.361	Callithrix_jacchus
ENSAOCG00000003318	blm	57	64.504	ENSCAFG00000012385	BLM	55	64.504	Canis_familiaris
ENSAOCG00000003318	blm	84	64.504	ENSCAFG00020016111	BLM	87	67.125	Canis_lupus_dingo
ENSAOCG00000003318	blm	57	64.885	ENSCHIG00000010329	BLM	55	64.676	Capra_hircus
ENSAOCG00000003318	blm	57	65.399	ENSTSYG00000012368	BLM	51	72.541	Carlito_syrichta
ENSAOCG00000003318	blm	52	71.739	ENSCAPG00000017976	BLM	68	71.739	Cavia_aperea
ENSAOCG00000003318	blm	57	65.438	ENSCCAG00000023069	BLM	55	73.156	Cebus_capucinus
ENSAOCG00000003318	blm	57	65.565	ENSCATG00000040609	BLM	75	76.066	Cercocebus_atys
ENSAOCG00000003318	blm	57	65.272	ENSCLAG00000012111	BLM	55	65.526	Chinchilla_lanigera
ENSAOCG00000003318	blm	57	65.311	ENSCSAG00000017040	BLM	55	65.311	Chlorocebus_sabaeus
ENSAOCG00000003318	blm	56	53.099	ENSCHOG00000006255	BLM	75	53.099	Choloepus_hoffmanni
ENSAOCG00000003318	blm	81	52.357	ENSCPBG00000025000	BLM	98	53.362	Chrysemys_picta_bellii
ENSAOCG00000003318	blm	60	62.028	ENSCGRG00001024897	Blm	59	61.449	Cricetulus_griseus_chok1gshd
ENSAOCG00000003318	blm	95	68.971	ENSCSEG00000013483	blm	99	68.670	Cynoglossus_semilaevis
ENSAOCG00000003318	blm	77	66.798	ENSCVAG00000017583	blm	99	64.794	Cyprinodon_variegatus
ENSAOCG00000003318	blm	99	57.880	ENSDARG00000077089	blm	100	58.078	Danio_rerio
ENSAOCG00000003318	blm	60	62.159	ENSDORG00000011033	Blm	99	53.695	Dipodomys_ordii
ENSAOCG00000003318	blm	60	59.032	ENSEASG00005006727	BLM	59	58.796	Equus_asinus_asinus
ENSAOCG00000003318	blm	60	62.456	ENSECAG00000011405	BLM	59	62.028	Equus_caballus
ENSAOCG00000003318	blm	94	46.429	ENSEEUG00000001434	BLM	56	63.245	Erinaceus_europaeus
ENSAOCG00000003318	blm	99	57.912	ENSELUG00000019098	blm	99	57.114	Esox_lucius
ENSAOCG00000003318	blm	65	65.013	ENSFCAG00000006087	BLM	60	72.951	Felis_catus
ENSAOCG00000003318	blm	81	51.781	ENSFALG00000010981	BLM	74	64.400	Ficedula_albicollis
ENSAOCG00000003318	blm	51	77.711	ENSFDAG00000012658	BLM	51	77.711	Fukomys_damarensis
ENSAOCG00000003318	blm	100	71.663	ENSFHEG00000002553	blm	100	71.235	Fundulus_heteroclitus
ENSAOCG00000003318	blm	99	59.228	ENSGMOG00000016431	blm	98	69.195	Gadus_morhua
ENSAOCG00000003318	blm	96	77.027	ENSGAFG00000001117	blm	100	77.027	Gambusia_affinis
ENSAOCG00000003318	blm	99	70.617	ENSGACG00000010863	blm	100	89.773	Gasterosteus_aculeatus
ENSAOCG00000003318	blm	60	66.469	ENSGAGG00000005383	BLM	97	54.133	Gopherus_agassizii
ENSAOCG00000003318	blm	57	65.565	ENSGGOG00000007710	BLM	76	75.244	Gorilla_gorilla
ENSAOCG00000003318	blm	100	77.204	ENSHBUG00000015943	blm	100	76.272	Haplochromis_burtoni
ENSAOCG00000003318	blm	64	64.277	ENSHGLG00000013231	BLM	66	64.528	Heterocephalus_glaber_female
ENSAOCG00000003318	blm	76	69.106	ENSHCOG00000011455	blm	100	68.887	Hippocampus_comes
ENSAOCG00000003318	blm	77	62.938	ENSIPUG00000000529	blm	77	70.651	Ictalurus_punctatus
ENSAOCG00000003318	blm	64	65.184	ENSSTOG00000005000	BLM	64	65.057	Ictidomys_tridecemlineatus
ENSAOCG00000003318	blm	76	45.961	ENSJJAG00000016322	Blm	99	45.860	Jaculus_jaculus
ENSAOCG00000003318	blm	100	75.089	ENSKMAG00000016608	blm	100	74.750	Kryptolebias_marmoratus
ENSAOCG00000003318	blm	60	82.509	ENSLBEG00000018729	blm	97	82.509	Labrus_bergylta
ENSAOCG00000003318	blm	61	64.509	ENSLACG00000006490	BLM	59	64.245	Latimeria_chalumnae
ENSAOCG00000003318	blm	99	53.010	ENSLOCG00000014302	blm	100	53.643	Lepisosteus_oculatus
ENSAOCG00000003318	blm	57	65.565	ENSMFAG00000042982	BLM	75	76.066	Macaca_fascicularis
ENSAOCG00000003318	blm	57	65.565	ENSMMUG00000019526	BLM	75	76.066	Macaca_mulatta
ENSAOCG00000003318	blm	57	65.438	ENSMNEG00000031251	BLM	75	75.738	Macaca_nemestrina
ENSAOCG00000003318	blm	57	61.959	ENSMLEG00000032934	BLM	54	61.832	Mandrillus_leucophaeus
ENSAOCG00000003318	blm	99	75.144	ENSMAMG00000008726	blm	99	75.072	Mastacembelus_armatus
ENSAOCG00000003318	blm	100	72.778	ENSMZEG00005022323	blm	100	72.036	Maylandia_zebra
ENSAOCG00000003318	blm	60	61.882	ENSMAUG00000008953	Blm	59	61.467	Mesocricetus_auratus
ENSAOCG00000003318	blm	57	65.438	ENSMICG00000034442	BLM	50	72.746	Microcebus_murinus
ENSAOCG00000003318	blm	57	65.605	ENSMOCG00000016367	Blm	55	64.841	Microtus_ochrogaster
ENSAOCG00000003318	blm	100	73.726	ENSMMOG00000006959	blm	100	73.295	Mola_mola
ENSAOCG00000003318	blm	61	60.748	ENSMODG00000019449	BLM	59	60.748	Monodelphis_domestica
ENSAOCG00000003318	blm	100	76.571	ENSMALG00000007323	blm	100	75.857	Monopterus_albus
ENSAOCG00000003318	blm	60	61.910	MGP_CAROLIEiJ_G0029907	Blm	59	61.511	Mus_caroli
ENSAOCG00000003318	blm	60	62.073	ENSMUSG00000030528	Blm	59	61.439	Mus_musculus
ENSAOCG00000003318	blm	60	62.102	MGP_PahariEiJ_G0013129	Blm	59	62.338	Mus_pahari
ENSAOCG00000003318	blm	87	62.191	MGP_SPRETEiJ_G0031009	Blm	67	61.629	Mus_spretus
ENSAOCG00000003318	blm	57	64.295	ENSNGAG00000001275	Blm	59	61.814	Nannospalax_galili
ENSAOCG00000003318	blm	100	72.816	ENSNBRG00000019702	blm	100	72.467	Neolamprologus_brichardi
ENSAOCG00000003318	blm	57	61.168	ENSNLEG00000012087	BLM	74	61.188	Nomascus_leucogenys
ENSAOCG00000003318	blm	81	48.087	ENSMEUG00000007253	BLM	79	48.312	Notamacropus_eugenii
ENSAOCG00000003318	blm	53	64.120	ENSOPRG00000011667	BLM	51	64.159	Ochotona_princeps
ENSAOCG00000003318	blm	76	50.094	ENSODEG00000015373	BLM	99	50.281	Octodon_degus
ENSAOCG00000003318	blm	100	71.311	ENSONIG00000015193	blm	100	70.802	Oreochromis_niloticus
ENSAOCG00000003318	blm	56	65.128	ENSOANG00000009316	-	100	64.661	Ornithorhynchus_anatinus
ENSAOCG00000003318	blm	60	61.124	ENSOCUG00000013969	BLM	59	60.656	Oryctolagus_cuniculus
ENSAOCG00000003318	blm	100	73.582	ENSORLG00000008110	blm	100	72.590	Oryzias_latipes
ENSAOCG00000003318	blm	100	73.295	ENSORLG00020004812	blm	100	72.302	Oryzias_latipes_hni
ENSAOCG00000003318	blm	100	73.654	ENSORLG00015018640	blm	100	74.332	Oryzias_latipes_hsok
ENSAOCG00000003318	blm	100	72.525	ENSOMEG00000023545	blm	100	71.603	Oryzias_melastigma
ENSAOCG00000003318	blm	65	62.753	ENSOGAG00000005708	BLM	64	61.893	Otolemur_garnettii
ENSAOCG00000003318	blm	57	64.885	ENSOARG00000012875	BLM	55	64.676	Ovis_aries
ENSAOCG00000003318	blm	57	65.438	ENSPPAG00000032173	BLM	50	73.156	Pan_paniscus
ENSAOCG00000003318	blm	65	64.758	ENSPPRG00000002471	BLM	60	72.746	Panthera_pardus
ENSAOCG00000003318	blm	65	64.122	ENSPTIG00000016168	BLM	60	72.301	Panthera_tigris_altaica
ENSAOCG00000003318	blm	57	65.140	ENSPTRG00000007460	BLM	50	72.895	Pan_troglodytes
ENSAOCG00000003318	blm	57	65.438	ENSPANG00000018572	BLM	75	76.066	Papio_anubis
ENSAOCG00000003318	blm	99	55.838	ENSPKIG00000008954	blm	99	55.425	Paramormyrops_kingsleyae
ENSAOCG00000003318	blm	72	70.344	ENSPMGG00000006629	blm	100	70.547	Periophthalmus_magnuspinnatus
ENSAOCG00000003318	blm	60	61.747	ENSPEMG00000017348	Blm	59	61.747	Peromyscus_maniculatus_bairdii
ENSAOCG00000003318	blm	88	61.260	ENSPCIG00000006609	BLM	87	61.260	Phascolarctos_cinereus
ENSAOCG00000003318	blm	100	70.580	ENSPFOG00000005059	blm	100	69.807	Poecilia_formosa
ENSAOCG00000003318	blm	100	70.293	ENSPLAG00000017344	blm	100	69.593	Poecilia_latipinna
ENSAOCG00000003318	blm	100	70.508	ENSPMEG00000000321	blm	100	69.736	Poecilia_mexicana
ENSAOCG00000003318	blm	100	70.150	ENSPREG00000007715	blm	100	70.959	Poecilia_reticulata
ENSAOCG00000003318	blm	57	64.168	ENSPPYG00000006784	BLM	55	63.914	Pongo_abelii
ENSAOCG00000003318	blm	61	60.588	ENSPCAG00000008960	BLM	60	60.353	Procavia_capensis
ENSAOCG00000003318	blm	65	56.925	ENSPCOG00000000439	BLM	61	58.402	Propithecus_coquereli
ENSAOCG00000003318	blm	70	75.410	ENSPVAG00000011642	BLM	59	75.410	Pteropus_vampyrus
ENSAOCG00000003318	blm	91	85.664	ENSPNYG00000010956	blm	95	84.965	Pundamilia_nyererei
ENSAOCG00000003318	blm	100	59.179	ENSPNAG00000011714	blm	100	59.170	Pygocentrus_nattereri
ENSAOCG00000003318	blm	57	65.272	ENSRBIG00000029656	BLM	76	75.570	Rhinopithecus_bieti
ENSAOCG00000003318	blm	57	65.272	ENSRROG00000037871	BLM	76	75.570	Rhinopithecus_roxellana
ENSAOCG00000003318	blm	69	61.593	ENSSHAG00000007988	BLM	67	61.189	Sarcophilus_harrisii
ENSAOCG00000003318	blm	66	72.150	ENSSFOG00015015462	blm	74	71.849	Scleropages_formosus
ENSAOCG00000003318	blm	100	75.506	ENSSMAG00000001120	blm	100	75.578	Scophthalmus_maximus
ENSAOCG00000003318	blm	100	76.660	ENSSDUG00000010955	blm	100	77.445	Seriola_dumerili
ENSAOCG00000003318	blm	100	76.588	ENSSLDG00000000634	blm	100	77.445	Seriola_lalandi_dorsalis
ENSAOCG00000003318	blm	61	60.303	ENSSARG00000006398	BLM	63	60.303	Sorex_araneus
ENSAOCG00000003318	blm	76	52.714	ENSSPUG00000000013	BLM	96	50.479	Sphenodon_punctatus
ENSAOCG00000003318	blm	99	83.027	ENSSPAG00000013999	blm	99	82.815	Stegastes_partitus
ENSAOCG00000003318	blm	61	65.437	ENSSSCG00000001816	BLM	62	65.437	Sus_scrofa
ENSAOCG00000003318	blm	81	46.899	ENSTGUG00000009959	-	99	46.318	Taeniopygia_guttata
ENSAOCG00000003318	blm	99	68.683	ENSTRUG00000019860	blm	99	68.844	Takifugu_rubripes
ENSAOCG00000003318	blm	99	66.151	ENSTNIG00000019246	blm	99	65.588	Tetraodon_nigroviridis
ENSAOCG00000003318	blm	56	72.746	ENSUMAG00000009105	BLM	96	66.896	Ursus_maritimus
ENSAOCG00000003318	blm	81	49.307	ENSVPAG00000000085	BLM	55	61.646	Vicugna_pacos
ENSAOCG00000003318	blm	80	63.798	ENSVVUG00000006402	BLM	65	63.798	Vulpes_vulpes
ENSAOCG00000003318	blm	76	55.535	ENSXETG00000007847	blm	74	55.032	Xenopus_tropicalis
ENSAOCG00000003318	blm	100	67.158	ENSXCOG00000020227	blm	100	67.040	Xiphophorus_couchianus
ENSAOCG00000003318	blm	100	71.111	ENSXMAG00000002951	blm	100	70.824	Xiphophorus_maculatus