EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000003330 (Gene tree)
Gene ID: 111573718
Gene Symbol: tomm20a
Alias: arid4b|ch1073-321c8.1|wu:fk47b11
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 44950 bases
Position: chrNXFZ01002933.1:1026340-1071289
Accession: 111573718
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000000482	Tudor-knot	PF11717.8	2.8e-10	1	1
ENSAOCP00000019724	Tudor-knot	PF11717.8	2.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000014864	-	6216	XM_023278012	ENSAOCP00000000477	1243 (aa)	XP_023133780	UPI000C30E298
ENSAOCT00000014851	-	6399	XM_023278010	ENSAOCP00000000482	1304 (aa)	XP_023133778	UPI000C300D36
ENSAOCT00000014883	-	6235	-	ENSAOCP00000019724	1304 (aa)	-	UPI000C300D36

Gene Model

Click here to download ENSAOCG00000003330's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000003330's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000003330	tomm20a	87	75.485	ENSG00000054267	ARID4B	85	75.485	Homo_sapiens
ENSAOCG00000003330	tomm20a	100	97.929	ENSAPOG00000010823	tomm20a	100	97.929	Acanthochromis_polyacanthus
ENSAOCG00000003330	tomm20a	93	92.908	ENSACIG00000006313	tomm20a	100	92.908	Amphilophus_citrinellus
ENSAOCG00000003330	tomm20a	100	99.540	ENSAPEG00000024018	tomm20a	100	99.540	Amphiprion_percula
ENSAOCG00000003330	tomm20a	100	89.847	ENSATEG00000014930	tomm20a	100	90.305	Anabas_testudineus
ENSAOCG00000003330	tomm20a	100	50.495	ENSAPLG00000004422	ARID4B	99	50.071	Anas_platyrhynchos
ENSAOCG00000003330	tomm20a	99	50.796	ENSACAG00000001289	ARID4B	99	51.808	Anolis_carolinensis
ENSAOCG00000003330	tomm20a	93	84.177	ENSACLG00000023521	tomm20a	100	84.430	Astatotilapia_calliptera
ENSAOCG00000003330	tomm20a	83	77.724	ENSAMXG00000003657	tomm20a	91	76.998	Astyanax_mexicanus
ENSAOCG00000003330	tomm20a	53	59.651	ENSBTAG00000000222	ARID4B	99	51.734	Bos_taurus
ENSAOCG00000003330	tomm20a	99	51.489	ENSCPOG00000034766	ARID4B	99	52.187	Cavia_porcellus
ENSAOCG00000003330	tomm20a	100	52.098	ENSCLAG00000003255	ARID4B	99	52.786	Chinchilla_lanigera
ENSAOCG00000003330	tomm20a	52	60.468	ENSCGRG00001014397	Arid4b	99	52.544	Cricetulus_griseus_chok1gshd
ENSAOCG00000003330	tomm20a	52	60.443	ENSCGRG00000004910	Arid4b	99	52.513	Cricetulus_griseus_crigri
ENSAOCG00000003330	tomm20a	99	82.663	ENSCSEG00000012928	tomm20a	99	83.901	Cynoglossus_semilaevis
ENSAOCG00000003330	tomm20a	100	82.798	ENSCVAG00000003244	tomm20a	100	83.563	Cyprinodon_variegatus
ENSAOCG00000003330	tomm20a	100	65.530	ENSDARG00000090656	tomm20a	99	66.232	Danio_rerio
ENSAOCG00000003330	tomm20a	88	63.271	ENSETEG00000005596	ARID4B	89	62.735	Echinops_telfairi
ENSAOCG00000003330	tomm20a	64	56.914	ENSELUG00000018441	tomm20a	91	55.678	Esox_lucius
ENSAOCG00000003330	tomm20a	54	60.512	ENSFCAG00000030096	ARID4B	54	60.763	Felis_catus
ENSAOCG00000003330	tomm20a	100	51.363	ENSFALG00000013548	ARID4B	97	51.121	Ficedula_albicollis
ENSAOCG00000003330	tomm20a	100	84.183	ENSFHEG00000003798	tomm20a	100	84.106	Fundulus_heteroclitus
ENSAOCG00000003330	tomm20a	90	76.078	ENSGMOG00000018747	tomm20a	91	76.078	Gadus_morhua
ENSAOCG00000003330	tomm20a	99	80.895	ENSGACG00000004298	tomm20a	100	82.108	Gasterosteus_aculeatus
ENSAOCG00000003330	tomm20a	100	89.135	ENSHBUG00000020369	tomm20a	100	89.518	Haplochromis_burtoni
ENSAOCG00000003330	tomm20a	95	85.839	ENSHCOG00000010376	tomm20a	100	82.737	Hippocampus_comes
ENSAOCG00000003330	tomm20a	100	64.242	ENSIPUG00000014234	arid4b	99	63.864	Ictalurus_punctatus
ENSAOCG00000003330	tomm20a	59	44.471	ENSJJAG00000021368	Arid4b	99	51.997	Jaculus_jaculus
ENSAOCG00000003330	tomm20a	91	78.497	ENSKMAG00000010987	tomm20a	98	79.145	Kryptolebias_marmoratus
ENSAOCG00000003330	tomm20a	100	60.771	ENSLOCG00000015899	tomm20a	99	61.709	Lepisosteus_oculatus
ENSAOCG00000003330	tomm20a	99	51.367	ENSLAFG00000014295	ARID4B	99	52.461	Loxodonta_africana
ENSAOCG00000003330	tomm20a	93	89.647	ENSMAMG00000017134	tomm20a	99	89.851	Mastacembelus_armatus
ENSAOCG00000003330	tomm20a	100	88.982	ENSMZEG00005009879	tomm20a	100	89.365	Maylandia_zebra
ENSAOCG00000003330	tomm20a	54	59.656	ENSMGAG00000011896	ARID4B	99	51.919	Meleagris_gallopavo
ENSAOCG00000003330	tomm20a	99	52.256	ENSMICG00000016358	ARID4B	55	60.651	Microcebus_murinus
ENSAOCG00000003330	tomm20a	93	89.716	ENSMMOG00000000561	tomm20a	98	86.469	Mola_mola
ENSAOCG00000003330	tomm20a	100	51.110	ENSMODG00000008417	ARID4B	99	51.418	Monodelphis_domestica
ENSAOCG00000003330	tomm20a	100	90.115	ENSMALG00000005205	tomm20a	100	90.575	Monopterus_albus
ENSAOCG00000003330	tomm20a	93	89.387	ENSNBRG00000019684	tomm20a	100	91.745	Neolamprologus_brichardi
ENSAOCG00000003330	tomm20a	100	51.900	ENSODEG00000005373	ARID4B	99	52.993	Octodon_degus
ENSAOCG00000003330	tomm20a	53	60.272	ENSOCUG00000006605	ARID4B	99	52.308	Oryctolagus_cuniculus
ENSAOCG00000003330	tomm20a	100	80.949	ENSORLG00000012510	tomm20a	100	80.763	Oryzias_latipes
ENSAOCG00000003330	tomm20a	92	85.106	ENSORLG00020013988	tomm20a	100	87.264	Oryzias_latipes_hni
ENSAOCG00000003330	tomm20a	92	85.511	ENSORLG00015022835	tomm20a	100	87.204	Oryzias_latipes_hsok
ENSAOCG00000003330	tomm20a	100	81.867	ENSOMEG00000000521	tomm20a	100	81.714	Oryzias_melastigma
ENSAOCG00000003330	tomm20a	99	51.561	ENSOARG00000003481	ARID4B	97	51.777	Ovis_aries
ENSAOCG00000003330	tomm20a	54	60.080	ENSPPRG00000013739	ARID4B	54	60.846	Panthera_pardus
ENSAOCG00000003330	tomm20a	54	60.080	ENSPTIG00000012520	ARID4B	99	52.539	Panthera_tigris_altaica
ENSAOCG00000003330	tomm20a	93	49.391	ENSPSIG00000011632	ARID4B	99	49.883	Pelodiscus_sinensis
ENSAOCG00000003330	tomm20a	52	79.699	ENSPMGG00000001596	tomm20a	89	79.699	Periophthalmus_magnuspinnatus
ENSAOCG00000003330	tomm20a	100	51.957	ENSPCIG00000029756	ARID4B	99	52.155	Phascolarctos_cinereus
ENSAOCG00000003330	tomm20a	100	84.271	ENSPFOG00000019430	tomm20a	100	85.334	Poecilia_formosa
ENSAOCG00000003330	tomm20a	100	84.119	ENSPLAG00000010554	tomm20a	100	85.182	Poecilia_latipinna
ENSAOCG00000003330	tomm20a	100	82.143	ENSPMEG00000003093	tomm20a	100	79.466	Poecilia_mexicana
ENSAOCG00000003330	tomm20a	100	83.397	ENSPREG00000007996	tomm20a	100	84.996	Poecilia_reticulata
ENSAOCG00000003330	tomm20a	100	50.979	ENSPVAG00000015159	ARID4B	99	50.978	Pteropus_vampyrus
ENSAOCG00000003330	tomm20a	99	82.708	ENSPNYG00000013988	tomm20a	100	82.479	Pundamilia_nyererei
ENSAOCG00000003330	tomm20a	100	67.817	ENSPNAG00000000523	tomm20a	92	67.813	Pygocentrus_nattereri
ENSAOCG00000003330	tomm20a	90	72.906	ENSRBIG00000042029	ARID4B	99	48.523	Rhinopithecus_bieti
ENSAOCG00000003330	tomm20a	100	50.746	ENSSHAG00000015214	ARID4B	99	51.988	Sarcophilus_harrisii
ENSAOCG00000003330	tomm20a	100	61.492	ENSSFOG00015000132	arid4b	99	62.385	Scleropages_formosus
ENSAOCG00000003330	tomm20a	76	50.795	ENSSFOG00015008923	tomm20a	98	52.696	Scleropages_formosus
ENSAOCG00000003330	tomm20a	100	86.797	ENSSMAG00000010430	tomm20a	100	88.072	Scophthalmus_maximus
ENSAOCG00000003330	tomm20a	100	93.180	ENSSDUG00000003019	tomm20a	100	93.257	Seriola_dumerili
ENSAOCG00000003330	tomm20a	100	51.991	ENSSPUG00000015466	ARID4B	97	51.504	Sphenodon_punctatus
ENSAOCG00000003330	tomm20a	100	95.709	ENSSPAG00000007358	tomm20a	100	95.709	Stegastes_partitus
ENSAOCG00000003330	tomm20a	100	51.911	ENSTGUG00000010246	ARID4B	99	51.667	Taeniopygia_guttata
ENSAOCG00000003330	tomm20a	69	75.714	ENSTRUG00000002893	tomm20a	100	75.495	Takifugu_rubripes
ENSAOCG00000003330	tomm20a	69	68.796	ENSTBEG00000003961	ARID4B	67	68.550	Tupaia_belangeri
ENSAOCG00000003330	tomm20a	100	51.504	ENSTTRG00000002228	ARID4B	99	51.699	Tursiops_truncatus
ENSAOCG00000003330	tomm20a	68	58.184	ENSVPAG00000006841	ARID4B	68	58.564	Vicugna_pacos
ENSAOCG00000003330	tomm20a	100	85.922	ENSXMAG00000006538	tomm20a	100	85.769	Xiphophorus_maculatus