EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000003465 (Gene tree)
Gene ID: 111587654
Gene Symbol: parn
Alias: zgc:56067
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 10620 bases
Position: chrNXFZ01005791.1:155240-165859
Accession: 111587654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000000601	RNA_bind	PF08675.11	9.3e-34	1	1
ENSAOCP00000000601	CAF1	PF04857.20	5.2e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000014659	-	2523	XM_023297701	ENSAOCP00000000601	686 (aa)	XP_023153469	UPI000C312A7F

Gene Model

Click here to download ENSAOCG00000003465's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000003465's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000003465	parn	84	73.773	ENSG00000140694	PARN	99	70.383	Homo_sapiens
ENSAOCG00000003465	parn	78	78.131	ENSAMEG00000011208	PARN	83	78.131	Ailuropoda_melanoleuca
ENSAOCG00000003465	parn	86	84.664	ENSACIG00000000619	parn	99	84.664	Amphilophus_citrinellus
ENSAOCG00000003465	parn	71	99.387	ENSAPEG00000010661	parn	94	99.387	Amphiprion_percula
ENSAOCG00000003465	parn	100	88.824	ENSATEG00000004661	parn	100	88.534	Anabas_testudineus
ENSAOCG00000003465	parn	82	73.010	ENSAPLG00000013914	PARN	90	73.356	Anas_platyrhynchos
ENSAOCG00000003465	parn	84	73.818	ENSACAG00000004973	PARN	90	73.818	Anolis_carolinensis
ENSAOCG00000003465	parn	84	73.604	ENSANAG00000031516	PARN	94	77.966	Aotus_nancymaae
ENSAOCG00000003465	parn	100	88.921	ENSACLG00000004742	parn	100	88.484	Astatotilapia_calliptera
ENSAOCG00000003465	parn	100	72.648	ENSAMXG00000012390	parn	96	77.387	Astyanax_mexicanus
ENSAOCG00000003465	parn	78	74.906	ENSBTAG00000018097	PARN	81	78.224	Bos_taurus
ENSAOCG00000003465	parn	84	73.604	ENSCJAG00000015866	PARN	94	77.966	Callithrix_jacchus
ENSAOCG00000003465	parn	78	77.903	ENSCAFG00000018795	PARN	83	77.903	Canis_familiaris
ENSAOCG00000003465	parn	78	78.277	ENSCAFG00020024126	PARN	83	78.277	Canis_lupus_dingo
ENSAOCG00000003465	parn	78	78.090	ENSCHIG00000018143	PARN	83	78.090	Capra_hircus
ENSAOCG00000003465	parn	68	51.139	ENSCAPG00000007984	PARN	78	51.139	Cavia_aperea
ENSAOCG00000003465	parn	84	71.912	ENSCPOG00000002263	PARN	92	71.912	Cavia_porcellus
ENSAOCG00000003465	parn	84	73.604	ENSCCAG00000030367	PARN	94	77.966	Cebus_capucinus
ENSAOCG00000003465	parn	50	33.103	ENSCATG00000033196	PNLDC1	72	33.103	Cercocebus_atys
ENSAOCG00000003465	parn	78	78.652	ENSCATG00000041368	PARN	95	78.652	Cercocebus_atys
ENSAOCG00000003465	parn	83	73.504	ENSCLAG00000015406	PARN	91	73.504	Chinchilla_lanigera
ENSAOCG00000003465	parn	84	73.604	ENSCSAG00000008142	PARN	95	71.732	Chlorocebus_sabaeus
ENSAOCG00000003465	parn	82	57.586	ENSCHOG00000007014	PARN	91	57.586	Choloepus_hoffmanni
ENSAOCG00000003465	parn	74	74.330	ENSCPBG00000006609	PARN	90	74.330	Chrysemys_picta_bellii
ENSAOCG00000003465	parn	75	42.214	ENSCING00000010142	-	99	42.214	Ciona_intestinalis
ENSAOCG00000003465	parn	83	62.149	ENSCANG00000028849	-	93	77.966	Colobus_angolensis_palliatus
ENSAOCG00000003465	parn	83	73.264	ENSCGRG00001012096	Parn	91	73.264	Cricetulus_griseus_chok1gshd
ENSAOCG00000003465	parn	83	73.264	ENSCGRG00000004939	Parn	91	73.264	Cricetulus_griseus_crigri
ENSAOCG00000003465	parn	100	82.319	ENSCSEG00000002064	parn	100	82.464	Cynoglossus_semilaevis
ENSAOCG00000003465	parn	100	84.593	ENSCVAG00000014848	parn	100	84.593	Cyprinodon_variegatus
ENSAOCG00000003465	parn	100	66.810	ENSDARG00000102634	parn	100	66.763	Danio_rerio
ENSAOCG00000003465	parn	83	73.413	ENSDNOG00000000833	PARN	94	78.277	Dasypus_novemcinctus
ENSAOCG00000003465	parn	61	75.379	ENSETEG00000014828	-	69	75.379	Echinops_telfairi
ENSAOCG00000003465	parn	83	73.196	ENSEASG00005011400	PARN	100	64.731	Equus_asinus_asinus
ENSAOCG00000003465	parn	83	73.024	ENSECAG00000017792	PARN	100	64.586	Equus_caballus
ENSAOCG00000003465	parn	66	79.630	ENSEEUG00000010370	PARN	86	64.865	Erinaceus_europaeus
ENSAOCG00000003465	parn	100	74.496	ENSELUG00000013139	parn	90	74.640	Esox_lucius
ENSAOCG00000003465	parn	78	78.464	ENSFCAG00000044961	PARN	83	78.464	Felis_catus
ENSAOCG00000003465	parn	83	72.337	ENSFALG00000003911	PARN	93	70.413	Ficedula_albicollis
ENSAOCG00000003465	parn	81	74.216	ENSFDAG00000009234	PARN	90	74.216	Fukomys_damarensis
ENSAOCG00000003465	parn	86	81.849	ENSFHEG00000013738	parn	92	91.525	Fundulus_heteroclitus
ENSAOCG00000003465	parn	80	85.455	ENSGMOG00000003231	parn	99	85.455	Gadus_morhua
ENSAOCG00000003465	parn	89	69.683	ENSGALG00000003091	PARN	99	70.000	Gallus_gallus
ENSAOCG00000003465	parn	100	83.213	ENSGAFG00000011061	parn	100	82.779	Gambusia_affinis
ENSAOCG00000003465	parn	100	76.149	ENSGACG00000019501	parn	99	83.117	Gasterosteus_aculeatus
ENSAOCG00000003465	parn	84	73.773	ENSGGOG00000025224	PARN	91	77.966	Gorilla_gorilla
ENSAOCG00000003465	parn	100	89.359	ENSHBUG00000017906	parn	100	89.213	Haplochromis_burtoni
ENSAOCG00000003465	parn	90	69.920	ENSHGLG00000010886	PARN	94	69.920	Heterocephalus_glaber_female
ENSAOCG00000003465	parn	90	69.920	ENSHGLG00100014659	PARN	94	69.920	Heterocephalus_glaber_male
ENSAOCG00000003465	parn	83	81.076	ENSHCOG00000008683	parn	99	81.076	Hippocampus_comes
ENSAOCG00000003465	parn	100	61.383	ENSIPUG00000012401	parn	100	61.583	Ictalurus_punctatus
ENSAOCG00000003465	parn	82	73.137	ENSSTOG00000007519	PARN	91	73.137	Ictidomys_tridecemlineatus
ENSAOCG00000003465	parn	83	72.664	ENSJJAG00000023049	Parn	99	67.930	Jaculus_jaculus
ENSAOCG00000003465	parn	100	86.628	ENSKMAG00000009462	parn	100	86.628	Kryptolebias_marmoratus
ENSAOCG00000003465	parn	93	89.185	ENSLBEG00000009167	parn	98	90.127	Labrus_bergylta
ENSAOCG00000003465	parn	73	75.794	ENSLACG00000004207	PARN	100	75.236	Latimeria_chalumnae
ENSAOCG00000003465	parn	100	71.367	ENSLOCG00000000715	parn	100	71.367	Lepisosteus_oculatus
ENSAOCG00000003465	parn	83	73.585	ENSLAFG00000015036	PARN	91	73.585	Loxodonta_africana
ENSAOCG00000003465	parn	84	70.152	ENSMFAG00000044852	PARN	88	77.966	Macaca_fascicularis
ENSAOCG00000003465	parn	84	73.604	ENSMMUG00000018849	PARN	94	77.966	Macaca_mulatta
ENSAOCG00000003465	parn	84	73.604	ENSMNEG00000045108	PARN	95	71.732	Macaca_nemestrina
ENSAOCG00000003465	parn	83	73.504	ENSMLEG00000031743	PARN	95	71.569	Mandrillus_leucophaeus
ENSAOCG00000003465	parn	100	88.567	ENSMAMG00000006939	parn	100	88.567	Mastacembelus_armatus
ENSAOCG00000003465	parn	100	89.067	ENSMZEG00005013590	parn	100	88.630	Maylandia_zebra
ENSAOCG00000003465	parn	86	69.916	ENSMGAG00000001004	PARN	97	67.524	Meleagris_gallopavo
ENSAOCG00000003465	parn	83	67.692	ENSMAUG00000008025	Parn	91	67.692	Mesocricetus_auratus
ENSAOCG00000003465	parn	83	73.333	ENSMICG00000016053	PARN	91	76.271	Microcebus_murinus
ENSAOCG00000003465	parn	72	78.788	ENSMOCG00000022211	Parn	100	78.788	Microtus_ochrogaster
ENSAOCG00000003465	parn	80	89.674	ENSMMOG00000011333	parn	90	89.674	Mola_mola
ENSAOCG00000003465	parn	72	80.483	ENSMODG00000004915	PARN	99	80.483	Monodelphis_domestica
ENSAOCG00000003465	parn	96	88.654	ENSMALG00000019426	parn	94	93.682	Monopterus_albus
ENSAOCG00000003465	parn	81	72.840	MGP_CAROLIEiJ_G0020466	Parn	89	72.840	Mus_caroli
ENSAOCG00000003465	parn	81	72.759	ENSMUSG00000022685	Parn	100	76.829	Mus_musculus
ENSAOCG00000003465	parn	80	74.317	MGP_PahariEiJ_G0016172	Parn	86	74.317	Mus_pahari
ENSAOCG00000003465	parn	81	72.504	MGP_SPRETEiJ_G0021361	Parn	89	72.504	Mus_spretus
ENSAOCG00000003465	parn	78	78.652	ENSMPUG00000014464	PARN	83	78.652	Mustela_putorius_furo
ENSAOCG00000003465	parn	72	78.788	ENSMLUG00000005414	PARN	100	78.788	Myotis_lucifugus
ENSAOCG00000003465	parn	80	91.818	ENSNBRG00000006805	parn	93	91.818	Neolamprologus_brichardi
ENSAOCG00000003465	parn	83	73.469	ENSNLEG00000010241	PARN	91	77.966	Nomascus_leucogenys
ENSAOCG00000003465	parn	68	65.833	ENSMEUG00000008178	-	74	65.833	Notamacropus_eugenii
ENSAOCG00000003465	parn	82	68.403	ENSOPRG00000012187	PARN	91	68.403	Ochotona_princeps
ENSAOCG00000003465	parn	84	67.591	ENSODEG00000001617	PARN	92	67.591	Octodon_degus
ENSAOCG00000003465	parn	100	89.796	ENSONIG00000000151	parn	100	89.650	Oreochromis_niloticus
ENSAOCG00000003465	parn	83	73.196	ENSOCUG00000000322	PARN	91	73.196	Oryctolagus_cuniculus
ENSAOCG00000003465	parn	100	82.122	ENSORLG00020010313	parn	100	82.267	Oryzias_latipes_hni
ENSAOCG00000003465	parn	100	81.831	ENSORLG00015000300	parn	100	81.977	Oryzias_latipes_hsok
ENSAOCG00000003465	parn	100	80.842	ENSOMEG00000019555	parn	100	81.132	Oryzias_melastigma
ENSAOCG00000003465	parn	72	78.427	ENSOGAG00000014626	PARN	100	78.427	Otolemur_garnettii
ENSAOCG00000003465	parn	72	79.596	ENSOARG00000007574	PARN	100	79.596	Ovis_aries
ENSAOCG00000003465	parn	84	73.604	ENSPPAG00000031438	PARN	91	77.966	Pan_paniscus
ENSAOCG00000003465	parn	78	78.464	ENSPPRG00000018583	PARN	83	78.464	Panthera_pardus
ENSAOCG00000003465	parn	78	78.464	ENSPTIG00000012135	PARN	83	78.464	Panthera_tigris_altaica
ENSAOCG00000003465	parn	84	73.604	ENSPTRG00000007792	PARN	91	77.966	Pan_troglodytes
ENSAOCG00000003465	parn	84	71.404	ENSPANG00000020099	PARN	93	77.966	Papio_anubis
ENSAOCG00000003465	parn	99	70.043	ENSPKIG00000022807	parn	95	72.459	Paramormyrops_kingsleyae
ENSAOCG00000003465	parn	82	75.043	ENSPSIG00000014804	PARN	90	75.043	Pelodiscus_sinensis
ENSAOCG00000003465	parn	89	79.024	ENSPMGG00000014431	parn	85	79.675	Periophthalmus_magnuspinnatus
ENSAOCG00000003465	parn	83	70.639	ENSPEMG00000018439	Parn	91	70.639	Peromyscus_maniculatus_bairdii
ENSAOCG00000003465	parn	78	67.844	ENSPMAG00000003956	parn	99	67.844	Petromyzon_marinus
ENSAOCG00000003465	parn	62	72.196	ENSPCIG00000001259	PARN	91	77.966	Phascolarctos_cinereus
ENSAOCG00000003465	parn	100	83.309	ENSPFOG00000012823	parn	100	83.309	Poecilia_formosa
ENSAOCG00000003465	parn	100	83.454	ENSPLAG00000006395	parn	100	83.454	Poecilia_latipinna
ENSAOCG00000003465	parn	100	83.454	ENSPMEG00000007711	parn	100	83.454	Poecilia_mexicana
ENSAOCG00000003465	parn	100	83.599	ENSPREG00000000147	parn	100	83.599	Poecilia_reticulata
ENSAOCG00000003465	parn	84	72.850	ENSPPYG00000007123	PARN	91	72.850	Pongo_abelii
ENSAOCG00000003465	parn	75	67.054	ENSPCAG00000001741	PARN	85	67.054	Procavia_capensis
ENSAOCG00000003465	parn	83	70.598	ENSPCOG00000019292	PARN	91	76.271	Propithecus_coquereli
ENSAOCG00000003465	parn	81	71.478	ENSPVAG00000002547	PARN	91	71.478	Pteropus_vampyrus
ENSAOCG00000003465	parn	100	89.067	ENSPNYG00000006835	parn	100	88.921	Pundamilia_nyererei
ENSAOCG00000003465	parn	93	71.118	ENSPNAG00000018905	parn	100	71.118	Pygocentrus_nattereri
ENSAOCG00000003465	parn	78	76.217	ENSRNOG00000002912	Parn	96	78.571	Rattus_norvegicus
ENSAOCG00000003465	parn	84	71.912	ENSSBOG00000034726	PARN	94	77.966	Saimiri_boliviensis_boliviensis
ENSAOCG00000003465	parn	61	79.187	ENSSHAG00000008493	PARN	93	79.187	Sarcophilus_harrisii
ENSAOCG00000003465	parn	100	70.881	ENSSFOG00015014165	parn	98	76.471	Scleropages_formosus
ENSAOCG00000003465	parn	100	85.265	ENSSMAG00000000685	parn	100	85.551	Scophthalmus_maximus
ENSAOCG00000003465	parn	100	89.870	ENSSDUG00000014555	parn	100	90.304	Seriola_dumerili
ENSAOCG00000003465	parn	63	80.000	ENSSARG00000014339	PARN	75	80.000	Sorex_araneus
ENSAOCG00000003465	parn	83	72.542	ENSSPUG00000007719	PARN	91	72.542	Sphenodon_punctatus
ENSAOCG00000003465	parn	100	94.898	ENSSPAG00000007095	parn	100	94.752	Stegastes_partitus
ENSAOCG00000003465	parn	100	65.702	ENSSSCG00000007878	PARN	82	73.083	Sus_scrofa
ENSAOCG00000003465	parn	83	72.556	ENSTGUG00000004971	PARN	97	70.275	Taeniopygia_guttata
ENSAOCG00000003465	parn	82	89.279	ENSTNIG00000008252	parn	90	89.982	Tetraodon_nigroviridis
ENSAOCG00000003465	parn	74	60.788	ENSTBEG00000010407	PARN	90	60.788	Tupaia_belangeri
ENSAOCG00000003465	parn	82	69.138	ENSTTRG00000002843	PARN	91	69.138	Tursiops_truncatus
ENSAOCG00000003465	parn	63	71.167	ENSUAMG00000008283	PARN	94	67.506	Ursus_americanus
ENSAOCG00000003465	parn	78	78.464	ENSUMAG00000004527	PARN	83	78.464	Ursus_maritimus
ENSAOCG00000003465	parn	81	69.931	ENSVPAG00000008968	PARN	93	69.931	Vicugna_pacos
ENSAOCG00000003465	parn	78	78.277	ENSVVUG00000019509	PARN	83	78.277	Vulpes_vulpes
ENSAOCG00000003465	parn	83	71.259	ENSXETG00000010994	parn	100	76.326	Xenopus_tropicalis
ENSAOCG00000003465	parn	86	83.333	ENSXCOG00000015990	parn	99	83.333	Xiphophorus_couchianus
ENSAOCG00000003465	parn	100	83.164	ENSXMAG00000014783	parn	100	82.583	Xiphophorus_maculatus