EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000003518 (Gene tree)
Gene ID: 111563854
Gene Symbol: -
Alias: -
Full Name: nuclear assembly factor 1 ribonucleoprotein
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 7815 bases
Position: chrNXFZ01006283.1:563904-571718
Accession: 111563854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000000645	Gar1	PF04410.14	2.2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000014571	-	2845	XM_023263122	ENSAOCP00000000645	398 (aa)	XP_023118890	UPI000C31AA06

Gene Model

Click here to download ENSAOCG00000003518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000003518's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000003518	-	65	43.345	ENSG00000145414	NAF1	95	62.500	Homo_sapiens
ENSAOCG00000003518	-	100	91.000	ENSAPOG00000007663	-	99	89.750	Acanthochromis_polyacanthus
ENSAOCG00000003518	-	100	98.015	ENSAPEG00000004453	-	100	98.015	Amphiprion_percula
ENSAOCG00000003518	-	93	58.219	ENSATEG00000003514	-	73	62.687	Anabas_testudineus
ENSAOCG00000003518	-	69	49.029	ENSAPLG00000003210	NAF1	52	50.811	Anas_platyrhynchos
ENSAOCG00000003518	-	98	63.819	ENSACLG00000017092	-	93	61.153	Astatotilapia_calliptera
ENSAOCG00000003518	-	67	40.850	ENSCJAG00000012406	NAF1	95	62.500	Callithrix_jacchus
ENSAOCG00000003518	-	65	41.812	ENSTSYG00000005946	NAF1	84	63.889	Carlito_syrichta
ENSAOCG00000003518	-	54	48.858	ENSCCAG00000030023	NAF1	95	62.500	Cebus_capucinus
ENSAOCG00000003518	-	65	43.493	ENSCATG00000022663	NAF1	95	62.500	Cercocebus_atys
ENSAOCG00000003518	-	65	43.493	ENSCANG00000039151	NAF1	95	62.500	Colobus_angolensis_palliatus
ENSAOCG00000003518	-	71	56.949	ENSCVAG00000003483	-	88	56.944	Cyprinodon_variegatus
ENSAOCG00000003518	-	84	62.798	ENSFHEG00000015835	-	62	63.608	Fundulus_heteroclitus
ENSAOCG00000003518	-	94	59.352	ENSGAFG00000017883	-	62	63.580	Gambusia_affinis
ENSAOCG00000003518	-	55	61.062	ENSGACG00000016383	-	100	58.850	Gasterosteus_aculeatus
ENSAOCG00000003518	-	65	43.345	ENSGGOG00000000894	NAF1	95	62.500	Gorilla_gorilla
ENSAOCG00000003518	-	69	65.468	ENSHBUG00000002404	-	86	66.065	Haplochromis_burtoni
ENSAOCG00000003518	-	72	56.446	ENSHCOG00000001581	-	74	57.045	Hippocampus_comes
ENSAOCG00000003518	-	89	66.391	ENSKMAG00000005434	-	61	66.124	Kryptolebias_marmoratus
ENSAOCG00000003518	-	90	66.033	ENSLBEG00000020414	-	80	68.805	Labrus_bergylta
ENSAOCG00000003518	-	65	43.493	ENSMFAG00000040952	NAF1	95	62.500	Macaca_fascicularis
ENSAOCG00000003518	-	65	43.151	ENSMMUG00000001717	NAF1	95	62.500	Macaca_mulatta
ENSAOCG00000003518	-	65	43.493	ENSMNEG00000032677	NAF1	95	62.500	Macaca_nemestrina
ENSAOCG00000003518	-	65	43.493	ENSMLEG00000035330	NAF1	95	62.500	Mandrillus_leucophaeus
ENSAOCG00000003518	-	73	74.074	ENSMAMG00000003269	-	92	74.729	Mastacembelus_armatus
ENSAOCG00000003518	-	98	64.141	ENSMZEG00005005830	-	96	61.461	Maylandia_zebra
ENSAOCG00000003518	-	53	46.606	ENSMGAG00000002133	NAF1	53	54.491	Meleagris_gallopavo
ENSAOCG00000003518	-	82	57.983	ENSMMOG00000016895	-	86	45.098	Mola_mola
ENSAOCG00000003518	-	97	65.347	ENSMALG00000018482	-	70	69.436	Monopterus_albus
ENSAOCG00000003518	-	66	42.069	MGP_SPRETEiJ_G0032213	-	54	39.921	Mus_spretus
ENSAOCG00000003518	-	61	63.710	ENSNBRG00000009348	-	99	63.710	Neolamprologus_brichardi
ENSAOCG00000003518	-	51	50.718	ENSNLEG00000006459	-	95	62.500	Nomascus_leucogenys
ENSAOCG00000003518	-	82	65.598	ENSONIG00000001826	-	85	67.905	Oreochromis_niloticus
ENSAOCG00000003518	-	72	61.076	ENSORLG00000002191	-	57	62.305	Oryzias_latipes
ENSAOCG00000003518	-	72	60.759	ENSORLG00020013478	-	57	62.305	Oryzias_latipes_hni
ENSAOCG00000003518	-	72	60.759	ENSORLG00015012985	-	57	62.617	Oryzias_latipes_hsok
ENSAOCG00000003518	-	77	64.630	ENSOMEG00000021322	-	63	64.688	Oryzias_melastigma
ENSAOCG00000003518	-	65	43.686	ENSPPAG00000034674	NAF1	95	62.500	Pan_paniscus
ENSAOCG00000003518	-	65	43.686	ENSPTRG00000016560	NAF1	95	62.500	Pan_troglodytes
ENSAOCG00000003518	-	55	47.325	ENSPANG00000015574	NAF1	95	62.500	Papio_anubis
ENSAOCG00000003518	-	94	58.458	ENSPFOG00000010705	-	85	60.703	Poecilia_formosa
ENSAOCG00000003518	-	94	58.706	ENSPLAG00000002200	-	65	63.354	Poecilia_latipinna
ENSAOCG00000003518	-	94	58.458	ENSPMEG00000004437	-	64	64.688	Poecilia_mexicana
ENSAOCG00000003518	-	94	57.711	ENSPREG00000022551	-	65	62.813	Poecilia_reticulata
ENSAOCG00000003518	-	98	54.000	ENSPNYG00000021456	-	92	51.372	Pundamilia_nyererei
ENSAOCG00000003518	-	66	43.243	ENSRBIG00000030027	NAF1	95	62.500	Rhinopithecus_bieti
ENSAOCG00000003518	-	65	43.151	ENSRROG00000040912	NAF1	95	62.500	Rhinopithecus_roxellana
ENSAOCG00000003518	-	55	49.321	ENSSBOG00000002085	NAF1	95	62.500	Saimiri_boliviensis_boliviensis
ENSAOCG00000003518	-	98	63.043	ENSSMAG00000015529	-	80	64.244	Scophthalmus_maximus
ENSAOCG00000003518	-	98	66.259	ENSSDUG00000005987	-	98	67.813	Seriola_dumerili
ENSAOCG00000003518	-	62	38.095	ENSSPUG00000004087	NAF1	58	57.229	Sphenodon_punctatus
ENSAOCG00000003518	-	70	63.889	ENSTRUG00000011908	-	60	70.404	Takifugu_rubripes
ENSAOCG00000003518	-	72	55.987	ENSXCOG00000013058	-	92	57.807	Xiphophorus_couchianus
ENSAOCG00000003518	-	94	59.204	ENSXMAG00000011494	-	65	64.706	Xiphophorus_maculatus