EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAOCG00000003804 (Gene tree)
Gene ID
111577856
Gene Symbol
MSI1
Alias
-
Full Name
RNA-binding protein Musashi homolog 1-like
Gene Type
protein_coding
Species
Amphiprion_ocellaris
Status
putative
Strand
Plus strand
Length
24243 bases
Position
chrNXFZ01003271.1:242004-266246
Accession
111577856
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAOCP00000000889RRM_1PF00076.222e-3312
ENSAOCP00000000889RRM_1PF00076.222e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAOCT00000014158MSI1-2013593XM_023284328ENSAOCP00000000889349 (aa)XP_023140096UPI000B8FB310
Gene Model
Click here to download ENSAOCG00000003804's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000003804's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAOCG00000003804MSI15440.212ENSAOCG00000005289-5441.436
ENSAOCG00000003804MSI15030.693ENSAOCG00000011133-7430.693
ENSAOCG00000003804MSI19483.792ENSAOCG00000009031-9583.792
ENSAOCG00000003804MSI15445.503ENSAOCG00000012562hnrnpaba8337.809
ENSAOCG00000003804MSI15134.667ENSAOCG00000000378rbm24a8636.047
ENSAOCG00000003804MSI15744.000ENSAOCG00000014191hnrnpd7740.079
ENSAOCG00000003804MSI15340.642ENSAOCG00000004095hnrnpa35140.642
ENSAOCG00000003804MSI15561.589ENSAOCG00000014822msi2a6961.589
ENSAOCG00000003804MSI18030.693ENSAOCG00000013497-7230.693
ENSAOCG00000003804MSI15443.915ENSAOCG00000020596-8137.324
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAOCG00000003804MSI110083.791ENSG00000135097MSI110083.791Homo_sapiens
ENSAOCG00000003804MSI110092.308ENSAPOG00000023458-10092.308Acanthochromis_polyacanthus
ENSAOCG00000003804MSI1100100.000ENSAPOG00000003191MSI1100100.000Acanthochromis_polyacanthus
ENSAOCG00000003804MSI19464.042ENSAMEG00000013302MSI18392.308Ailuropoda_melanoleuca
ENSAOCG00000003804MSI19387.462ENSACIG00000017754-7297.525Amphilophus_citrinellus
ENSAOCG00000003804MSI110092.308ENSAPEG00000006857-8492.308Amphiprion_percula
ENSAOCG00000003804MSI1100100.000ENSAPEG00000003245MSI1100100.000Amphiprion_percula
ENSAOCG00000003804MSI110091.501ENSATEG00000023779-10091.501Anabas_testudineus
ENSAOCG00000003804MSI110087.955ENSATEG00000017059MSI110087.955Anabas_testudineus
ENSAOCG00000003804MSI110083.425ENSACAG00000002762MSI110084.254Anolis_carolinensis
ENSAOCG00000003804MSI110083.791ENSANAG00000027151MSI110083.791Aotus_nancymaae
ENSAOCG00000003804MSI18282.986ENSANAG00000027901-8882.986Aotus_nancymaae
ENSAOCG00000003804MSI110092.571ENSACLG00000000117-10093.578Astatotilapia_calliptera
ENSAOCG00000003804MSI110098.006ENSACLG00000011230MSI110098.006Astatotilapia_calliptera
ENSAOCG00000003804MSI19489.655ENSAMXG00000038960msi17689.655Astyanax_mexicanus
ENSAOCG00000003804MSI110083.791ENSBTAG00000009800MSI110085.924Bos_taurus
ENSAOCG00000003804MSI110083.791ENSCJAG00000008578MSI110083.791Callithrix_jacchus
ENSAOCG00000003804MSI110083.516ENSCAFG00000010283MSI110083.516Canis_familiaris
ENSAOCG00000003804MSI19485.852ENSCAFG00020020585MSI110085.852Canis_lupus_dingo
ENSAOCG00000003804MSI110082.114ENSCHIG00000024304MSI110082.114Capra_hircus
ENSAOCG00000003804MSI19485.321ENSTSYG00000033949MSI19585.321Carlito_syrichta
ENSAOCG00000003804MSI19486.081ENSCAPG00000003919MSI17886.081Cavia_aperea
ENSAOCG00000003804MSI19485.965ENSCPOG00000012361MSI110085.965Cavia_porcellus
ENSAOCG00000003804MSI110083.791ENSCCAG00000035567MSI110083.791Cebus_capucinus
ENSAOCG00000003804MSI110083.791ENSCATG00000030019MSI110083.791Cercocebus_atys
ENSAOCG00000003804MSI19485.965ENSCLAG00000011329MSI110085.965Chinchilla_lanigera
ENSAOCG00000003804MSI17882.437ENSCSAG00000002265MSI19682.437Chlorocebus_sabaeus
ENSAOCG00000003804MSI110086.686ENSCPBG00000011349MSI110086.686Chrysemys_picta_bellii
ENSAOCG00000003804MSI19485.366ENSCANG00000040651MSI110085.366Colobus_angolensis_palliatus
ENSAOCG00000003804MSI110083.791ENSCGRG00001018883Msi110083.791Cricetulus_griseus_chok1gshd
ENSAOCG00000003804MSI19485.410ENSCGRG00000002191Msi17285.410Cricetulus_griseus_crigri
ENSAOCG00000003804MSI110091.143ENSCSEG00000008352-10091.143Cynoglossus_semilaevis
ENSAOCG00000003804MSI110098.286ENSCSEG00000005834-10098.286Cynoglossus_semilaevis
ENSAOCG00000003804MSI19484.049ENSCSEG00000011032MSI110084.049Cynoglossus_semilaevis
ENSAOCG00000003804MSI15173.134ENSCVAG00000017430zgc:1107969473.134Cyprinodon_variegatus
ENSAOCG00000003804MSI17681.019ENSCVAG00000017463-8981.019Cyprinodon_variegatus
ENSAOCG00000003804MSI110092.857ENSCVAG00000009100MSI110092.857Cyprinodon_variegatus
ENSAOCG00000003804MSI19485.079ENSDARG00000010710msi110092.991Danio_rerio
ENSAOCG00000003804MSI17991.628ENSDARG00000102015CABZ01037298.19891.628Danio_rerio
ENSAOCG00000003804MSI19482.278ENSDNOG00000005713MSI19182.278Dasypus_novemcinctus
ENSAOCG00000003804MSI19484.731ENSDORG00000005610Msi19484.731Dipodomys_ordii
ENSAOCG00000003804MSI19482.622ENSETEG00000004756MSI110082.622Echinops_telfairi
ENSAOCG00000003804MSI110083.791ENSEASG00005004736MSI110083.791Equus_asinus_asinus
ENSAOCG00000003804MSI110083.791ENSECAG00000017526MSI110083.791Equus_caballus
ENSAOCG00000003804MSI19487.423ENSELUG00000023280-10087.423Esox_lucius
ENSAOCG00000003804MSI19485.960ENSELUG00000023219MSI19285.960Esox_lucius
ENSAOCG00000003804MSI110083.791ENSFCAG00000011007MSI110083.791Felis_catus
ENSAOCG00000003804MSI19489.000ENSFALG00000007574MSI110089.000Ficedula_albicollis
ENSAOCG00000003804MSI19485.061ENSFDAG00000019586MSI110085.061Fukomys_damarensis
ENSAOCG00000003804MSI110092.593ENSFHEG00000022446MSI110092.593Fundulus_heteroclitus
ENSAOCG00000003804MSI110098.286ENSFHEG00000003560-10098.286Fundulus_heteroclitus
ENSAOCG00000003804MSI110091.404ENSGMOG00000001006MSI19991.117Gadus_morhua
ENSAOCG00000003804MSI110087.006ENSGMOG00000017838-10087.006Gadus_morhua
ENSAOCG00000003804MSI19489.695ENSGALG00000007227MSI19875.318Gallus_gallus
ENSAOCG00000003804MSI110070.255ENSGAFG00000005860-10070.255Gambusia_affinis
ENSAOCG00000003804MSI19498.165ENSGAFG00000021522MSI19498.165Gambusia_affinis
ENSAOCG00000003804MSI110090.598ENSGACG00000012679MSI110090.598Gasterosteus_aculeatus
ENSAOCG00000003804MSI110088.154ENSGACG00000008674-10088.154Gasterosteus_aculeatus
ENSAOCG00000003804MSI110086.402ENSGAGG00000016037MSI110086.402Gopherus_agassizii
ENSAOCG00000003804MSI19485.669ENSGGOG00000010328MSI110085.669Gorilla_gorilla
ENSAOCG00000003804MSI110092.571ENSHBUG00000011841-10092.571Haplochromis_burtoni
ENSAOCG00000003804MSI110098.006ENSHBUG00000021921MSI110098.006Haplochromis_burtoni
ENSAOCG00000003804MSI110083.516ENSHGLG00000012782MSI110083.516Heterocephalus_glaber_female
ENSAOCG00000003804MSI19485.061ENSHGLG00100016848MSI110085.061Heterocephalus_glaber_male
ENSAOCG00000003804MSI19097.125ENSHCOG00000012019MSI19597.125Hippocampus_comes
ENSAOCG00000003804MSI110087.571ENSHCOG00000012067-10087.571Hippocampus_comes
ENSAOCG00000003804MSI110088.319ENSIPUG00000001976msi110088.319Ictalurus_punctatus
ENSAOCG00000003804MSI19485.852ENSSTOG00000009799MSI110085.852Ictidomys_tridecemlineatus
ENSAOCG00000003804MSI110071.547ENSJJAG00000010643-10071.111Jaculus_jaculus
ENSAOCG00000003804MSI110083.791ENSJJAG00000010463Msi110083.791Jaculus_jaculus
ENSAOCG00000003804MSI110092.837ENSKMAG00000011251MSI110092.837Kryptolebias_marmoratus
ENSAOCG00000003804MSI19492.638ENSKMAG00000019877-10092.638Kryptolebias_marmoratus
ENSAOCG00000003804MSI110092.593ENSLBEG00000008789MSI110092.593Labrus_bergylta
ENSAOCG00000003804MSI110098.857ENSLBEG00000001375-10098.857Labrus_bergylta
ENSAOCG00000003804MSI19483.430ENSLACG00000018287MSI110083.430Latimeria_chalumnae
ENSAOCG00000003804MSI15276.786ENSLOCG00000008618zgc:1107967176.786Lepisosteus_oculatus
ENSAOCG00000003804MSI19076.435ENSLAFG00000009412MSI110076.435Loxodonta_africana
ENSAOCG00000003804MSI19485.965ENSMFAG00000001798MSI110085.965Macaca_fascicularis
ENSAOCG00000003804MSI19485.965ENSMMUG00000031527MSI19685.057Macaca_mulatta
ENSAOCG00000003804MSI110083.791ENSMNEG00000040034MSI110083.791Macaca_nemestrina
ENSAOCG00000003804MSI19485.366ENSMLEG00000003921MSI110085.366Mandrillus_leucophaeus
ENSAOCG00000003804MSI110092.264ENSMAMG00000002279MSI110092.264Mastacembelus_armatus
ENSAOCG00000003804MSI110099.140ENSMAMG00000018426-10099.140Mastacembelus_armatus
ENSAOCG00000003804MSI110098.006ENSMZEG00005026892MSI110098.006Maylandia_zebra
ENSAOCG00000003804MSI110092.571ENSMZEG00005000340-10092.571Maylandia_zebra
ENSAOCG00000003804MSI16392.899ENSMGAG00000016518-10092.899Meleagris_gallopavo
ENSAOCG00000003804MSI17088.477ENSMAUG00000016820Msi110088.477Mesocricetus_auratus
ENSAOCG00000003804MSI110083.791ENSMICG00000033181MSI110083.791Microcebus_murinus
ENSAOCG00000003804MSI110083.516ENSMOCG00000002286Msi110083.516Microtus_ochrogaster
ENSAOCG00000003804MSI110087.106ENSMMOG00000012265-10087.106Mola_mola
ENSAOCG00000003804MSI19481.957ENSMMOG00000010492MSI19681.957Mola_mola
ENSAOCG00000003804MSI19059.036ENSMODG00000003189-10058.434Monodelphis_domestica
ENSAOCG00000003804MSI19498.773ENSMALG00000001426-10098.773Monopterus_albus
ENSAOCG00000003804MSI110092.571ENSMALG00000017889MSI110092.571Monopterus_albus
ENSAOCG00000003804MSI110083.242MGP_CAROLIEiJ_G0027626Msi110083.242Mus_caroli
ENSAOCG00000003804MSI110083.242ENSMUSG00000054256Msi19987.963Mus_musculus
ENSAOCG00000003804MSI110086.080MGP_PahariEiJ_G0024206Msi110086.080Mus_pahari
ENSAOCG00000003804MSI110083.242MGP_SPRETEiJ_G0028624Msi110083.242Mus_spretus
ENSAOCG00000003804MSI19485.852ENSMPUG00000003168MSI110085.852Mustela_putorius_furo
ENSAOCG00000003804MSI19476.488ENSMLUG00000010313MSI110076.488Myotis_lucifugus
ENSAOCG00000003804MSI19485.410ENSNGAG00000014508Msi19185.410Nannospalax_galili
ENSAOCG00000003804MSI110092.571ENSNBRG00000000841-10092.571Neolamprologus_brichardi
ENSAOCG00000003804MSI18888.525ENSNBRG00000018012MSI19988.525Neolamprologus_brichardi
ENSAOCG00000003804MSI19075.610ENSNLEG00000015636MSI110075.610Nomascus_leucogenys
ENSAOCG00000003804MSI19466.159ENSMEUG00000015759MSI110066.159Notamacropus_eugenii
ENSAOCG00000003804MSI19077.778ENSOPRG00000016879MSI110077.778Ochotona_princeps
ENSAOCG00000003804MSI19485.366ENSODEG00000006328MSI110085.366Octodon_degus
ENSAOCG00000003804MSI110092.571ENSONIG00000011182MSI110092.571Oreochromis_niloticus
ENSAOCG00000003804MSI110094.780ENSONIG00000019452-10094.780Oreochromis_niloticus
ENSAOCG00000003804MSI19486.174ENSOCUG00000027716MSI110086.174Oryctolagus_cuniculus
ENSAOCG00000003804MSI110098.281ENSORLG00000029593MSI110098.281Oryzias_latipes
ENSAOCG00000003804MSI110092.023ENSORLG00000019978-10092.023Oryzias_latipes
ENSAOCG00000003804MSI110098.281ENSORLG00020008266MSI19694.444Oryzias_latipes_hni
ENSAOCG00000003804MSI110092.023ENSORLG00020001208-7192.023Oryzias_latipes_hni
ENSAOCG00000003804MSI110098.281ENSORLG00015003916MSI110098.281Oryzias_latipes_hsok
ENSAOCG00000003804MSI110092.023ENSORLG00015013672-7192.023Oryzias_latipes_hsok
ENSAOCG00000003804MSI110092.308ENSOMEG00000017536MSI110092.308Oryzias_melastigma
ENSAOCG00000003804MSI110098.567ENSOMEG00000002272-10098.567Oryzias_melastigma
ENSAOCG00000003804MSI19982.143ENSOGAG00000003847MSI19982.143Otolemur_garnettii
ENSAOCG00000003804MSI19483.030ENSOARG00000012097MSI110083.030Ovis_aries
ENSAOCG00000003804MSI19485.366ENSPPAG00000043073MSI110085.366Pan_paniscus
ENSAOCG00000003804MSI110083.791ENSPPRG00000000370MSI110083.791Panthera_pardus
ENSAOCG00000003804MSI19485.852ENSPTIG00000008913MSI110085.852Panthera_tigris_altaica
ENSAOCG00000003804MSI110083.791ENSPTRG00000005531MSI110083.791Pan_troglodytes
ENSAOCG00000003804MSI110083.516ENSPANG00000006335MSI110083.516Papio_anubis
ENSAOCG00000003804MSI110094.286ENSPKIG00000016497MSI110094.286Paramormyrops_kingsleyae
ENSAOCG00000003804MSI110091.143ENSPKIG00000023575-10091.143Paramormyrops_kingsleyae
ENSAOCG00000003804MSI19486.544ENSPSIG00000011608-9386.544Pelodiscus_sinensis
ENSAOCG00000003804MSI17982.018ENSPSIG00000009621-10082.456Pelodiscus_sinensis
ENSAOCG00000003804MSI19087.302ENSPMGG00000000514MSI19787.302Periophthalmus_magnuspinnatus
ENSAOCG00000003804MSI19477.204ENSPMGG00000007743-9871.758Periophthalmus_magnuspinnatus
ENSAOCG00000003804MSI19483.976ENSPEMG00000010491Msi19583.976Peromyscus_maniculatus_bairdii
ENSAOCG00000003804MSI110098.286ENSPFOG00000008319-8698.286Poecilia_formosa
ENSAOCG00000003804MSI110092.308ENSPFOG00000013113MSI110092.308Poecilia_formosa
ENSAOCG00000003804MSI110098.286ENSPLAG00000012431-9798.286Poecilia_latipinna
ENSAOCG00000003804MSI110092.308ENSPLAG00000014025-10092.308Poecilia_latipinna
ENSAOCG00000003804MSI110092.308ENSPMEG00000012796MSI110092.308Poecilia_mexicana
ENSAOCG00000003804MSI110098.281ENSPMEG00000007025-8698.281Poecilia_mexicana
ENSAOCG00000003804MSI19787.464ENSPREG00000021416-9887.464Poecilia_reticulata
ENSAOCG00000003804MSI17680.090ENSPREG00000014574-10080.090Poecilia_reticulata
ENSAOCG00000003804MSI110082.967ENSPPYG00000005027MSI110082.967Pongo_abelii
ENSAOCG00000003804MSI17689.340ENSPCAG00000002300MSI17289.340Procavia_capensis
ENSAOCG00000003804MSI110083.791ENSPCOG00000017341MSI110083.791Propithecus_coquereli
ENSAOCG00000003804MSI19469.207ENSPVAG00000002225MSI110069.207Pteropus_vampyrus
ENSAOCG00000003804MSI110098.006ENSPNYG00000004379MSI110098.006Pundamilia_nyererei
ENSAOCG00000003804MSI110092.571ENSPNYG00000002529-10092.571Pundamilia_nyererei
ENSAOCG00000003804MSI110088.889ENSPNAG00000019337msi110088.889Pygocentrus_nattereri
ENSAOCG00000003804MSI19485.531ENSRNOG00000001156Msi110085.531Rattus_norvegicus
ENSAOCG00000003804MSI19485.852ENSRBIG00000036889MSI110085.852Rhinopithecus_bieti
ENSAOCG00000003804MSI19485.152ENSRROG00000041076MSI19385.152Rhinopithecus_roxellana
ENSAOCG00000003804MSI19485.965ENSSBOG00000030259MSI19985.965Saimiri_boliviensis_boliviensis
ENSAOCG00000003804MSI19474.837ENSSHAG00000006834MSI110074.837Sarcophilus_harrisii
ENSAOCG00000003804MSI19493.051ENSSFOG00015005350MSI19693.051Scleropages_formosus
ENSAOCG00000003804MSI19496.037ENSSFOG00015014964-9596.037Scleropages_formosus
ENSAOCG00000003804MSI19487.025ENSSMAG00000018824MSI19787.025Scophthalmus_maximus
ENSAOCG00000003804MSI19498.084ENSSMAG00000009156-7398.020Scophthalmus_maximus
ENSAOCG00000003804MSI110099.143ENSSDUG00000022697-10099.143Seriola_dumerili
ENSAOCG00000003804MSI110092.308ENSSDUG00000001027MSI110092.308Seriola_dumerili
ENSAOCG00000003804MSI110092.308ENSSLDG00000016832MSI110092.308Seriola_lalandi_dorsalis
ENSAOCG00000003804MSI110084.066ENSSLDG00000018706-10084.066Seriola_lalandi_dorsalis
ENSAOCG00000003804MSI110086.402ENSSPUG00000015741MSI110086.402Sphenodon_punctatus
ENSAOCG00000003804MSI17675.120ENSSPAG00000014085-10075.120Stegastes_partitus
ENSAOCG00000003804MSI19499.085ENSSPAG00000013098-10099.085Stegastes_partitus
ENSAOCG00000003804MSI15580.247ENSSPAG00000015573zgc:1107968280.247Stegastes_partitus
ENSAOCG00000003804MSI110083.516ENSSSCG00000029365MSI110085.531Sus_scrofa
ENSAOCG00000003804MSI19486.471ENSTGUG00000009534MSI110086.471Taeniopygia_guttata
ENSAOCG00000003804MSI19485.987ENSTRUG00000015636-7985.987Takifugu_rubripes
ENSAOCG00000003804MSI15081.818ENSTRUG00000021586-9981.818Takifugu_rubripes
ENSAOCG00000003804MSI18190.783ENSTRUG00000016249MSI110081.818Takifugu_rubripes
ENSAOCG00000003804MSI110087.784ENSTNIG00000011469MSI110087.784Tetraodon_nigroviridis
ENSAOCG00000003804MSI19666.471ENSTNIG00000019814-9766.471Tetraodon_nigroviridis
ENSAOCG00000003804MSI19477.656ENSTBEG00000007182MSI110077.289Tupaia_belangeri
ENSAOCG00000003804MSI17687.970ENSTTRG00000005663MSI17887.970Tursiops_truncatus
ENSAOCG00000003804MSI17187.500ENSUAMG00000015514MSI19487.500Ursus_americanus
ENSAOCG00000003804MSI19482.410ENSUMAG00000006176MSI18882.410Ursus_maritimus
ENSAOCG00000003804MSI19485.410ENSVVUG00000020993MSI110084.685Vulpes_vulpes
ENSAOCG00000003804MSI110084.241ENSXETG00000012216msi110084.241Xenopus_tropicalis
ENSAOCG00000003804MSI19480.734ENSXCOG00000017605MSI18980.734Xiphophorus_couchianus
ENSAOCG00000003804MSI110092.857ENSXMAG00000027103MSI110080.392Xiphophorus_maculatus
ENSAOCG00000003804MSI110098.567ENSXMAG00000018237-10098.567Xiphophorus_maculatus

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