EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000003896 (Gene tree)
Gene ID: 111576683
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 12469 bases
Position: chrNXFZ01003170.1:600898-613366
Accession: 111576683
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000000971	RRM_1	PF00076.22	5.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000014029	-	2491	XM_023282497	ENSAOCP00000000971	306 (aa)	XP_023138265	-

Gene Model

Click here to download ENSAOCG00000003896's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000003896's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000003896	-	90	47.279	ENSAOCG00000023599	-	80	54.098
ENSAOCG00000003896	-	70	59.389	ENSAOCG00000001605	-	75	59.031
ENSAOCG00000003896	-	68	52.804	ENSAOCG00000009883	raly	63	53.521
ENSAOCG00000003896	-	89	82.310	ENSAOCG00000021616	-	78	88.142

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000003896	-	70	57.727	ENSG00000184672	RALYL	91	77.922	Homo_sapiens
ENSAOCG00000003896	-	100	99.346	ENSAPOG00000006963	hnrnpc	100	99.346	Acanthochromis_polyacanthus
ENSAOCG00000003896	-	96	73.311	ENSACIG00000016568	-	90	81.377	Amphilophus_citrinellus
ENSAOCG00000003896	-	96	93.624	ENSACIG00000000270	-	99	93.197	Amphilophus_citrinellus
ENSAOCG00000003896	-	91	82.562	ENSAPEG00000019962	-	85	83.032	Amphiprion_percula
ENSAOCG00000003896	-	100	100.000	ENSAPEG00000001489	-	100	100.000	Amphiprion_percula
ENSAOCG00000003896	-	92	93.993	ENSATEG00000011734	-	92	93.993	Anabas_testudineus
ENSAOCG00000003896	-	85	81.579	ENSATEG00000018006	-	78	92.453	Anabas_testudineus
ENSAOCG00000003896	-	70	53.247	ENSAPLG00000015574	RALYL	78	54.148	Anas_platyrhynchos
ENSAOCG00000003896	-	70	52.402	ENSACAG00000028464	RALYL	77	53.712	Anolis_carolinensis
ENSAOCG00000003896	-	86	51.111	ENSANAG00000023383	RALYL	76	54.867	Aotus_nancymaae
ENSAOCG00000003896	-	100	86.971	ENSACLG00000013636	-	90	92.580	Astatotilapia_calliptera
ENSAOCG00000003896	-	85	80.451	ENSACLG00000005707	-	86	86.561	Astatotilapia_calliptera
ENSAOCG00000003896	-	100	87.622	ENSACLG00000000995	-	100	89.251	Astatotilapia_calliptera
ENSAOCG00000003896	-	68	76.555	ENSAMXG00000042946	hnrnpc	97	79.581	Astyanax_mexicanus
ENSAOCG00000003896	-	85	80.309	ENSAMXG00000034915	zgc:55733	86	79.839	Astyanax_mexicanus
ENSAOCG00000003896	-	86	51.111	ENSCJAG00000000402	RALYL	76	54.222	Callithrix_jacchus
ENSAOCG00000003896	-	70	53.043	ENSCPOG00000012314	RALYL	77	52.966	Cavia_porcellus
ENSAOCG00000003896	-	86	51.852	ENSCCAG00000025003	RALYL	75	77.922	Cebus_capucinus
ENSAOCG00000003896	-	70	57.727	ENSCATG00000042145	RALYL	76	55.752	Cercocebus_atys
ENSAOCG00000003896	-	70	53.043	ENSCLAG00000005228	RALYL	77	52.966	Chinchilla_lanigera
ENSAOCG00000003896	-	68	53.097	ENSCHOG00000013228	RALYL	74	52.252	Choloepus_hoffmanni
ENSAOCG00000003896	-	70	57.727	ENSCANG00000039144	RALYL	76	55.752	Colobus_angolensis_palliatus
ENSAOCG00000003896	-	70	53.680	ENSCGRG00001009241	Ralyl	77	54.585	Cricetulus_griseus_chok1gshd
ENSAOCG00000003896	-	77	81.250	ENSCSEG00000021349	-	78	81.028	Cynoglossus_semilaevis
ENSAOCG00000003896	-	70	81.567	ENSCSEG00000019769	-	72	80.282	Cynoglossus_semilaevis
ENSAOCG00000003896	-	81	86.220	ENSCVAG00000016981	-	89	79.725	Cyprinodon_variegatus
ENSAOCG00000003896	-	89	74.088	ENSCVAG00000002797	-	85	72.222	Cyprinodon_variegatus
ENSAOCG00000003896	-	78	80.165	ENSDARG00000053810	hnrnpc	78	81.746	Danio_rerio
ENSAOCG00000003896	-	91	80.216	ENSDARG00000103845	zgc:55733	90	81.855	Danio_rerio
ENSAOCG00000003896	-	70	53.680	ENSDORG00000003721	Ralyl	77	54.585	Dipodomys_ordii
ENSAOCG00000003896	-	53	56.322	ENSETEG00000014028	RALYL	81	60.000	Echinops_telfairi
ENSAOCG00000003896	-	71	46.414	ENSEBUG00000012363	hnrnpc	70	45.339	Eptatretus_burgeri
ENSAOCG00000003896	-	73	48.908	ENSEBUG00000006049	RALYL	79	48.230	Eptatretus_burgeri
ENSAOCG00000003896	-	72	52.941	ENSEEUG00000007202	RALYL	80	54.506	Erinaceus_europaeus
ENSAOCG00000003896	-	79	83.012	ENSELUG00000007714	-	88	82.625	Esox_lucius
ENSAOCG00000003896	-	85	81.716	ENSELUG00000004132	-	87	82.879	Esox_lucius
ENSAOCG00000003896	-	68	57.674	ENSFALG00000008647	RALYL	96	58.491	Ficedula_albicollis
ENSAOCG00000003896	-	92	86.620	ENSFHEG00000003605	-	93	85.915	Fundulus_heteroclitus
ENSAOCG00000003896	-	83	80.443	ENSFHEG00000007278	-	93	73.941	Fundulus_heteroclitus
ENSAOCG00000003896	-	70	56.422	ENSGALG00000036938	RALYL	76	54.148	Gallus_gallus
ENSAOCG00000003896	-	95	75.932	ENSGAFG00000020992	-	82	86.561	Gambusia_affinis
ENSAOCG00000003896	-	92	86.268	ENSGAFG00000020486	-	93	85.563	Gambusia_affinis
ENSAOCG00000003896	-	71	75.785	ENSGACG00000018932	-	85	77.251	Gasterosteus_aculeatus
ENSAOCG00000003896	-	86	81.716	ENSGACG00000017772	-	96	84.524	Gasterosteus_aculeatus
ENSAOCG00000003896	-	70	57.727	ENSGGOG00000000841	RALYL	76	55.752	Gorilla_gorilla
ENSAOCG00000003896	-	85	80.451	ENSHBUG00000010527	-	79	85.882	Haplochromis_burtoni
ENSAOCG00000003896	-	100	87.948	ENSHBUG00000018342	-	100	89.577	Haplochromis_burtoni
ENSAOCG00000003896	-	70	52.609	ENSHGLG00000004866	RALYL	77	52.542	Heterocephalus_glaber_female
ENSAOCG00000003896	-	70	52.609	ENSHGLG00100017480	RALYL	77	52.542	Heterocephalus_glaber_male
ENSAOCG00000003896	-	83	78.967	ENSHCOG00000012333	hnrnpc	86	79.623	Hippocampus_comes
ENSAOCG00000003896	-	84	79.845	ENSIPUG00000011271	hnrnpc	97	84.685	Ictalurus_punctatus
ENSAOCG00000003896	-	86	79.468	ENSIPUG00000008666	zgc:55733	93	85.446	Ictalurus_punctatus
ENSAOCG00000003896	-	70	53.247	ENSSTOG00000012583	RALYL	78	54.148	Ictidomys_tridecemlineatus
ENSAOCG00000003896	-	81	81.496	ENSKMAG00000018265	-	78	85.827	Kryptolebias_marmoratus
ENSAOCG00000003896	-	92	89.643	ENSKMAG00000011170	-	91	89.007	Kryptolebias_marmoratus
ENSAOCG00000003896	-	96	81.311	ENSLBEG00000024418	-	99	79.070	Labrus_bergylta
ENSAOCG00000003896	-	95	85.666	ENSLBEG00000006979	-	99	83.618	Labrus_bergylta
ENSAOCG00000003896	-	84	80.916	ENSLBEG00000006193	-	79	84.980	Labrus_bergylta
ENSAOCG00000003896	-	85	70.741	ENSLOCG00000002560	hnrnpc	88	71.094	Lepisosteus_oculatus
ENSAOCG00000003896	-	70	57.727	ENSMNEG00000033288	RALYL	76	55.752	Macaca_nemestrina
ENSAOCG00000003896	-	70	57.727	ENSMLEG00000038284	RALYL	76	55.752	Mandrillus_leucophaeus
ENSAOCG00000003896	-	100	91.234	ENSMAMG00000012236	-	100	92.208	Mastacembelus_armatus
ENSAOCG00000003896	-	85	80.075	ENSMAMG00000008033	-	88	85.098	Mastacembelus_armatus
ENSAOCG00000003896	-	100	87.622	ENSMZEG00005020460	-	100	89.251	Maylandia_zebra
ENSAOCG00000003896	-	85	80.451	ENSMZEG00005024249	-	80	86.561	Maylandia_zebra
ENSAOCG00000003896	-	70	53.680	ENSMAUG00000015149	Ralyl	77	54.585	Mesocricetus_auratus
ENSAOCG00000003896	-	70	55.656	ENSMICG00000005558	RALYL	78	77.922	Microcebus_murinus
ENSAOCG00000003896	-	70	53.680	ENSMOCG00000017371	Ralyl	77	54.585	Microtus_ochrogaster
ENSAOCG00000003896	-	83	90.588	ENSMMOG00000021465	-	88	92.400	Mola_mola
ENSAOCG00000003896	-	81	82.329	ENSMMOG00000019520	-	82	89.623	Mola_mola
ENSAOCG00000003896	-	88	82.463	ENSMALG00000007520	-	90	83.146	Monopterus_albus
ENSAOCG00000003896	-	85	83.588	ENSMALG00000014623	-	79	83.665	Monopterus_albus
ENSAOCG00000003896	-	70	53.247	ENSMUSG00000039717	Ralyl	91	76.623	Mus_musculus
ENSAOCG00000003896	-	70	54.978	ENSMPUG00000010724	RALYL	77	53.712	Mustela_putorius_furo
ENSAOCG00000003896	-	70	53.680	ENSNGAG00000013375	Ralyl	77	54.585	Nannospalax_galili
ENSAOCG00000003896	-	97	89.597	ENSNBRG00000004912	-	97	90.785	Neolamprologus_brichardi
ENSAOCG00000003896	-	85	80.451	ENSNBRG00000015676	-	75	91.549	Neolamprologus_brichardi
ENSAOCG00000003896	-	70	58.257	ENSNLEG00000002702	RALYL	72	54.667	Nomascus_leucogenys
ENSAOCG00000003896	-	58	49.223	ENSOPRG00000013650	-	98	46.734	Ochotona_princeps
ENSAOCG00000003896	-	72	53.361	ENSODEG00000001012	RALYL	78	52.697	Octodon_degus
ENSAOCG00000003896	-	85	80.451	ENSONIG00000018350	-	79	85.882	Oreochromis_niloticus
ENSAOCG00000003896	-	99	85.852	ENSONIG00000007859	-	94	90.110	Oreochromis_niloticus
ENSAOCG00000003896	-	100	78.571	ENSORLG00000009999	-	93	79.225	Oryzias_latipes
ENSAOCG00000003896	-	81	80.843	ENSORLG00000003144	-	78	85.441	Oryzias_latipes
ENSAOCG00000003896	-	100	78.247	ENSORLG00020018228	hnrnpc	93	78.873	Oryzias_latipes_hni
ENSAOCG00000003896	-	81	80.843	ENSORLG00015009460	-	78	85.441	Oryzias_latipes_hsok
ENSAOCG00000003896	-	100	78.571	ENSORLG00015019755	-	93	79.225	Oryzias_latipes_hsok
ENSAOCG00000003896	-	86	79.401	ENSOMEG00000020488	-	93	80.000	Oryzias_melastigma
ENSAOCG00000003896	-	81	83.071	ENSOMEG00000022665	-	79	87.795	Oryzias_melastigma
ENSAOCG00000003896	-	70	57.727	ENSPPAG00000038705	RALYL	76	55.752	Pan_paniscus
ENSAOCG00000003896	-	70	57.727	ENSPPRG00000018612	RALYL	76	57.534	Panthera_pardus
ENSAOCG00000003896	-	70	57.727	ENSPTIG00000020331	RALYL	76	57.534	Panthera_tigris_altaica
ENSAOCG00000003896	-	70	57.727	ENSPTRG00000020381	RALYL	76	55.752	Pan_troglodytes
ENSAOCG00000003896	-	70	57.727	ENSPANG00000029305	RALYL	76	55.752	Papio_anubis
ENSAOCG00000003896	-	92	77.778	ENSPKIG00000022837	-	86	82.909	Paramormyrops_kingsleyae
ENSAOCG00000003896	-	91	81.185	ENSPKIG00000008592	-	87	81.949	Paramormyrops_kingsleyae
ENSAOCG00000003896	-	70	53.247	ENSPSIG00000011135	RALYL	76	54.148	Pelodiscus_sinensis
ENSAOCG00000003896	-	66	80.882	ENSPMGG00000017774	-	86	70.048	Periophthalmus_magnuspinnatus
ENSAOCG00000003896	-	71	89.908	ENSPMGG00000013144	-	81	86.854	Periophthalmus_magnuspinnatus
ENSAOCG00000003896	-	70	53.680	ENSPEMG00000016447	Ralyl	77	54.585	Peromyscus_maniculatus_bairdii
ENSAOCG00000003896	-	68	53.712	ENSPMAG00000002407	RALYL	96	53.333	Petromyzon_marinus
ENSAOCG00000003896	-	92	87.368	ENSPFOG00000001583	-	93	87.018	Poecilia_formosa
ENSAOCG00000003896	-	95	72.964	ENSPFOG00000002643	-	80	85.603	Poecilia_formosa
ENSAOCG00000003896	-	92	86.620	ENSPLAG00000015305	-	93	86.268	Poecilia_latipinna
ENSAOCG00000003896	-	81	82.213	ENSPLAG00000000061	-	78	86.957	Poecilia_latipinna
ENSAOCG00000003896	-	81	81.818	ENSPMEG00000016524	-	78	86.166	Poecilia_mexicana
ENSAOCG00000003896	-	92	87.676	ENSPMEG00000004802	-	93	86.620	Poecilia_mexicana
ENSAOCG00000003896	-	92	85.915	ENSPREG00000007928	-	93	85.563	Poecilia_reticulata
ENSAOCG00000003896	-	81	81.423	ENSPREG00000001852	-	84	86.166	Poecilia_reticulata
ENSAOCG00000003896	-	70	47.887	ENSPPYG00000018710	-	61	78.022	Pongo_abelii
ENSAOCG00000003896	-	72	51.477	ENSPVAG00000010821	RALYL	78	53.617	Pteropus_vampyrus
ENSAOCG00000003896	-	85	80.451	ENSPNYG00000003747	-	85	85.882	Pundamilia_nyererei
ENSAOCG00000003896	-	89	86.691	ENSPNYG00000020293	-	86	92.000	Pundamilia_nyererei
ENSAOCG00000003896	-	79	80.165	ENSPNAG00000015686	hnrnpc	84	82.869	Pygocentrus_nattereri
ENSAOCG00000003896	-	86	73.333	ENSPNAG00000019200	zgc:55733	81	74.510	Pygocentrus_nattereri
ENSAOCG00000003896	-	70	57.727	ENSRROG00000023925	RALYL	80	75.949	Rhinopithecus_roxellana
ENSAOCG00000003896	-	83	77.186	ENSSFOG00015012015	-	81	88.679	Scleropages_formosus
ENSAOCG00000003896	-	82	79.693	ENSSFOG00015012924	-	80	96.203	Scleropages_formosus
ENSAOCG00000003896	-	92	89.085	ENSSMAG00000013592	-	91	89.007	Scophthalmus_maximus
ENSAOCG00000003896	-	95	70.508	ENSSMAG00000011147	-	81	90.455	Scophthalmus_maximus
ENSAOCG00000003896	-	98	77.814	ENSSDUG00000006730	-	80	85.714	Seriola_dumerili
ENSAOCG00000003896	-	100	93.791	ENSSDUG00000001723	-	100	93.791	Seriola_dumerili
ENSAOCG00000003896	-	85	85.171	ENSSLDG00000007474	-	87	85.714	Seriola_lalandi_dorsalis
ENSAOCG00000003896	-	91	93.863	ENSSLDG00000007454	-	87	94.697	Seriola_lalandi_dorsalis
ENSAOCG00000003896	-	100	97.059	ENSSPAG00000023204	-	100	97.059	Stegastes_partitus
ENSAOCG00000003896	-	85	82.955	ENSSPAG00000013996	-	79	88.142	Stegastes_partitus
ENSAOCG00000003896	-	70	53.219	ENSTGUG00000011689	RALYL	78	54.585	Taeniopygia_guttata
ENSAOCG00000003896	-	83	85.375	ENSTRUG00000020158	-	82	86.747	Takifugu_rubripes
ENSAOCG00000003896	-	82	80.315	ENSTNIG00000000334	-	93	80.159	Tetraodon_nigroviridis
ENSAOCG00000003896	-	83	82.239	ENSTNIG00000007427	-	83	83.137	Tetraodon_nigroviridis
ENSAOCG00000003896	-	70	48.927	ENSTBEG00000005551	RALYL	88	46.186	Tupaia_belangeri
ENSAOCG00000003896	-	72	50.207	ENSTTRG00000015762	RALYL	78	52.632	Tursiops_truncatus
ENSAOCG00000003896	-	70	52.968	ENSVPAG00000008501	RALYL	76	53.211	Vicugna_pacos
ENSAOCG00000003896	-	50	89.571	ENSXCOG00000019434	-	94	75.785	Xiphophorus_couchianus
ENSAOCG00000003896	-	86	81.132	ENSXCOG00000006552	-	81	79.283	Xiphophorus_couchianus
ENSAOCG00000003896	-	81	81.423	ENSXMAG00000022849	-	82	86.166	Xiphophorus_maculatus
ENSAOCG00000003896	-	92	86.620	ENSXMAG00000009333	-	93	85.211	Xiphophorus_maculatus