EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000003944 (Gene tree)
Gene ID: 111578370
Gene Symbol: pum1
Alias: fb96a03|si:ch211-285e16.1|wu:fb96a03|wu:fb96a08|zgc:63671
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 27603 bases
Position: chrNXFZ01003318.1:41011-68613
Accession: 111578370
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000020072	PUF	PF00806.19	1.4e-70	1	8
ENSAOCP00000020072	PUF	PF00806.19	1.4e-70	2	8
ENSAOCP00000020072	PUF	PF00806.19	1.4e-70	3	8
ENSAOCP00000020072	PUF	PF00806.19	1.4e-70	4	8
ENSAOCP00000020072	PUF	PF00806.19	1.4e-70	5	8
ENSAOCP00000020072	PUF	PF00806.19	1.4e-70	6	8
ENSAOCP00000020072	PUF	PF00806.19	1.4e-70	7	8
ENSAOCP00000020072	PUF	PF00806.19	1.4e-70	8	8
ENSAOCP00000020080	PUF	PF00806.19	2.8e-69	1	8
ENSAOCP00000020080	PUF	PF00806.19	2.8e-69	2	8
ENSAOCP00000020080	PUF	PF00806.19	2.8e-69	3	8
ENSAOCP00000020080	PUF	PF00806.19	2.8e-69	4	8
ENSAOCP00000020080	PUF	PF00806.19	2.8e-69	5	8
ENSAOCP00000020080	PUF	PF00806.19	2.8e-69	6	8
ENSAOCP00000020080	PUF	PF00806.19	2.8e-69	7	8
ENSAOCP00000020080	PUF	PF00806.19	2.8e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000013967	-	5349	XM_023285132	ENSAOCP00000020080	1163 (aa)	XP_023140900	UPI000B903036
ENSAOCT00000013986	-	2946	-	ENSAOCP00000020072	981 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000003944's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000003944's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000003944	pum1	98	85.574	ENSAOCG00000016619	pum2	71	84.740

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000003944	pum1	94	91.084	ENSG00000134644	PUM1	99	91.566	Homo_sapiens
ENSAOCG00000003944	pum1	100	100.000	ENSAPOG00000021632	pum1	100	100.000	Acanthochromis_polyacanthus
ENSAOCG00000003944	pum1	100	91.084	ENSAMEG00000017656	PUM1	87	91.566	Ailuropoda_melanoleuca
ENSAOCG00000003944	pum1	100	98.710	ENSACIG00000021013	pum1	100	98.710	Amphilophus_citrinellus
ENSAOCG00000003944	pum1	100	100.000	ENSAPEG00000014550	pum1	100	100.000	Amphiprion_percula
ENSAOCG00000003944	pum1	100	99.518	ENSATEG00000016004	pum1	100	99.518	Anabas_testudineus
ENSAOCG00000003944	pum1	100	91.566	ENSAPLG00000009351	PUM1	90	91.566	Anas_platyrhynchos
ENSAOCG00000003944	pum1	100	76.656	ENSACAG00000000682	PUM1	88	91.566	Anolis_carolinensis
ENSAOCG00000003944	pum1	100	79.279	ENSANAG00000027865	PUM1	90	91.768	Aotus_nancymaae
ENSAOCG00000003944	pum1	92	98.967	ENSACLG00000019354	pum1	100	98.967	Astatotilapia_calliptera
ENSAOCG00000003944	pum1	100	82.373	ENSAMXG00000020607	pum1	96	82.373	Astyanax_mexicanus
ENSAOCG00000003944	pum1	100	79.400	ENSBTAG00000018979	PUM1	90	92.010	Bos_taurus
ENSAOCG00000003944	pum1	100	91.084	ENSCJAG00000006035	PUM1	90	91.566	Callithrix_jacchus
ENSAOCG00000003944	pum1	99	91.084	ENSCAFG00020024616	PUM1	100	91.566	Canis_lupus_dingo
ENSAOCG00000003944	pum1	100	79.559	ENSCHIG00000012952	PUM1	90	92.010	Capra_hircus
ENSAOCG00000003944	pum1	100	91.084	ENSTSYG00000008868	PUM1	100	82.410	Carlito_syrichta
ENSAOCG00000003944	pum1	100	90.843	ENSCPOG00000031613	PUM1	90	91.325	Cavia_porcellus
ENSAOCG00000003944	pum1	94	91.566	ENSCATG00000017991	PUM1	93	92.048	Cercocebus_atys
ENSAOCG00000003944	pum1	100	90.843	ENSCLAG00000007662	PUM1	90	91.325	Chinchilla_lanigera
ENSAOCG00000003944	pum1	100	77.606	ENSCSAG00000001028	PUM1	90	88.506	Chlorocebus_sabaeus
ENSAOCG00000003944	pum1	99	69.072	ENSCHOG00000010245	PUM1	93	65.700	Choloepus_hoffmanni
ENSAOCG00000003944	pum1	100	91.807	ENSCPBG00000009288	PUM1	99	91.807	Chrysemys_picta_bellii
ENSAOCG00000003944	pum1	100	91.084	ENSCANG00000042606	PUM1	100	81.312	Colobus_angolensis_palliatus
ENSAOCG00000003944	pum1	100	77.326	ENSCGRG00001024949	Pum1	100	82.942	Cricetulus_griseus_chok1gshd
ENSAOCG00000003944	pum1	100	77.326	ENSCGRG00000014197	Pum1	100	82.942	Cricetulus_griseus_crigri
ENSAOCG00000003944	pum1	92	96.813	ENSCSEG00000015981	pum1	100	96.813	Cynoglossus_semilaevis
ENSAOCG00000003944	pum1	100	98.072	ENSCVAG00000007043	pum1	100	97.850	Cyprinodon_variegatus
ENSAOCG00000003944	pum1	100	94.699	ENSDARG00000099256	pum1	100	81.610	Danio_rerio
ENSAOCG00000003944	pum1	100	90.602	ENSDNOG00000010939	PUM1	90	91.084	Dasypus_novemcinctus
ENSAOCG00000003944	pum1	100	78.921	ENSDORG00000001875	Pum1	100	76.076	Dipodomys_ordii
ENSAOCG00000003944	pum1	98	68.352	ENSETEG00000004355	PUM1	87	78.495	Echinops_telfairi
ENSAOCG00000003944	pum1	100	77.220	ENSEASG00005010813	PUM1	90	91.084	Equus_asinus_asinus
ENSAOCG00000003944	pum1	100	77.220	ENSECAG00000021369	PUM1	90	91.084	Equus_caballus
ENSAOCG00000003944	pum1	76	90.843	ENSEEUG00000003871	PUM1	74	91.111	Erinaceus_europaeus
ENSAOCG00000003944	pum1	100	96.386	ENSELUG00000002409	pum1	100	92.373	Esox_lucius
ENSAOCG00000003944	pum1	100	91.084	ENSFCAG00000010374	PUM1	90	91.566	Felis_catus
ENSAOCG00000003944	pum1	100	91.566	ENSFALG00000001214	PUM1	87	91.566	Ficedula_albicollis
ENSAOCG00000003944	pum1	100	90.777	ENSFDAG00000011319	PUM1	100	80.941	Fukomys_damarensis
ENSAOCG00000003944	pum1	100	90.956	ENSGMOG00000010491	pum1	100	90.614	Gadus_morhua
ENSAOCG00000003944	pum1	100	91.566	ENSGALG00000042598	PUM1	99	90.342	Gallus_gallus
ENSAOCG00000003944	pum1	100	98.194	ENSGAFG00000015617	pum1	100	98.194	Gambusia_affinis
ENSAOCG00000003944	pum1	100	98.795	ENSGACG00000005717	pum1	100	97.155	Gasterosteus_aculeatus
ENSAOCG00000003944	pum1	100	91.807	ENSGAGG00000001290	PUM1	99	91.807	Gopherus_agassizii
ENSAOCG00000003944	pum1	100	91.084	ENSGGOG00000011983	PUM1	90	91.566	Gorilla_gorilla
ENSAOCG00000003944	pum1	100	99.140	ENSHBUG00000018718	pum1	100	99.140	Haplochromis_burtoni
ENSAOCG00000003944	pum1	100	90.534	ENSHGLG00000013819	Pum1	100	80.941	Heterocephalus_glaber_female
ENSAOCG00000003944	pum1	100	90.534	ENSHGLG00100008621	Pum1	100	80.941	Heterocephalus_glaber_male
ENSAOCG00000003944	pum1	92	90.713	ENSHCOG00000005149	pum1	100	89.400	Hippocampus_comes
ENSAOCG00000003944	pum1	100	95.422	ENSIPUG00000020421	pum1	100	81.213	Ictalurus_punctatus
ENSAOCG00000003944	pum1	100	77.413	ENSSTOG00000010757	PUM1	90	91.325	Ictidomys_tridecemlineatus
ENSAOCG00000003944	pum1	100	77.606	ENSJJAG00000000530	Pum1	90	91.566	Jaculus_jaculus
ENSAOCG00000003944	pum1	100	98.554	ENSKMAG00000003481	pum1	100	98.452	Kryptolebias_marmoratus
ENSAOCG00000003944	pum1	100	98.022	ENSLBEG00000002527	pum1	100	98.022	Labrus_bergylta
ENSAOCG00000003944	pum1	100	75.514	ENSLACG00000017188	PUM1	99	72.848	Latimeria_chalumnae
ENSAOCG00000003944	pum1	100	94.217	ENSLOCG00000005210	pum1	99	80.833	Lepisosteus_oculatus
ENSAOCG00000003944	pum1	100	92.530	ENSLAFG00000003178	PUM1	90	92.530	Loxodonta_africana
ENSAOCG00000003944	pum1	100	91.084	ENSMFAG00000010291	PUM1	90	91.566	Macaca_fascicularis
ENSAOCG00000003944	pum1	100	91.084	ENSMMUG00000013520	PUM1	90	91.566	Macaca_mulatta
ENSAOCG00000003944	pum1	94	91.084	ENSMNEG00000034639	PUM1	90	91.566	Macaca_nemestrina
ENSAOCG00000003944	pum1	94	91.084	ENSMLEG00000038743	PUM1	100	81.312	Mandrillus_leucophaeus
ENSAOCG00000003944	pum1	100	98.882	ENSMAMG00000011606	pum1	100	98.882	Mastacembelus_armatus
ENSAOCG00000003944	pum1	100	99.140	ENSMZEG00005005834	pum1	100	99.140	Maylandia_zebra
ENSAOCG00000003944	pum1	100	91.566	ENSMGAG00000000724	PUM1	90	91.566	Meleagris_gallopavo
ENSAOCG00000003944	pum1	100	77.413	ENSMAUG00000022090	Pum1	100	83.292	Mesocricetus_auratus
ENSAOCG00000003944	pum1	100	90.557	ENSMICG00000012213	-	100	88.675	Microcebus_murinus
ENSAOCG00000003944	pum1	100	90.843	ENSMICG00000007713	-	90	91.325	Microcebus_murinus
ENSAOCG00000003944	pum1	100	77.413	ENSMOCG00000015463	Pum1	100	83.066	Microtus_ochrogaster
ENSAOCG00000003944	pum1	100	92.261	ENSMMOG00000019817	pum1	100	92.261	Mola_mola
ENSAOCG00000003944	pum1	100	91.325	ENSMODG00000017067	PUM1	85	91.084	Monodelphis_domestica
ENSAOCG00000003944	pum1	100	98.065	ENSMALG00000016399	pum1	100	98.065	Monopterus_albus
ENSAOCG00000003944	pum1	100	91.525	MGP_CAROLIEiJ_G0026549	Pum1	90	92.010	Mus_caroli
ENSAOCG00000003944	pum1	100	91.283	ENSMUSG00000028580	Pum1	90	91.768	Mus_musculus
ENSAOCG00000003944	pum1	100	91.283	MGP_PahariEiJ_G0028881	Pum1	90	91.768	Mus_pahari
ENSAOCG00000003944	pum1	100	91.283	MGP_SPRETEiJ_G0027529	Pum1	90	91.768	Mus_spretus
ENSAOCG00000003944	pum1	100	77.992	ENSMPUG00000015454	PUM1	90	91.566	Mustela_putorius_furo
ENSAOCG00000003944	pum1	100	91.525	ENSMLUG00000006490	PUM1	90	92.010	Myotis_lucifugus
ENSAOCG00000003944	pum1	100	77.413	ENSNGAG00000002378	Pum1	90	91.325	Nannospalax_galili
ENSAOCG00000003944	pum1	79	99.125	ENSNBRG00000010689	pum1	100	99.125	Neolamprologus_brichardi
ENSAOCG00000003944	pum1	94	87.952	ENSNLEG00000001151	PUM1	100	79.827	Nomascus_leucogenys
ENSAOCG00000003944	pum1	73	78.793	ENSMEUG00000000976	-	67	80.608	Notamacropus_eugenii
ENSAOCG00000003944	pum1	81	91.589	ENSOPRG00000001776	PUM1	70	91.589	Ochotona_princeps
ENSAOCG00000003944	pum1	100	79.441	ENSODEG00000003465	PUM1	90	91.325	Octodon_degus
ENSAOCG00000003944	pum1	100	99.656	ENSONIG00000002290	pum1	100	99.656	Oreochromis_niloticus
ENSAOCG00000003944	pum1	92	64.191	ENSOANG00000004902	-	100	61.538	Ornithorhynchus_anatinus
ENSAOCG00000003944	pum1	99	77.626	ENSOCUG00000008641	PUM1	89	91.727	Oryctolagus_cuniculus
ENSAOCG00000003944	pum1	100	98.029	ENSORLG00000011482	pum1	100	98.029	Oryzias_latipes
ENSAOCG00000003944	pum1	100	98.072	ENSORLG00020019461	pum1	100	98.029	Oryzias_latipes_hni
ENSAOCG00000003944	pum1	100	98.072	ENSORLG00015011375	pum1	100	98.029	Oryzias_latipes_hsok
ENSAOCG00000003944	pum1	100	94.924	ENSOMEG00000009312	pum1	100	98.554	Oryzias_melastigma
ENSAOCG00000003944	pum1	100	74.151	ENSOGAG00000011063	PUM1	100	71.950	Otolemur_garnettii
ENSAOCG00000003944	pum1	100	91.084	ENSOARG00000001899	PUM1	90	91.566	Ovis_aries
ENSAOCG00000003944	pum1	100	91.084	ENSPPAG00000044003	PUM1	90	91.566	Pan_paniscus
ENSAOCG00000003944	pum1	100	77.606	ENSPPRG00000001370	PUM1	100	81.436	Panthera_pardus
ENSAOCG00000003944	pum1	100	77.606	ENSPTIG00000010798	PUM1	100	81.683	Panthera_tigris_altaica
ENSAOCG00000003944	pum1	100	91.084	ENSPTRG00000000453	PUM1	90	91.566	Pan_troglodytes
ENSAOCG00000003944	pum1	94	91.566	ENSPANG00000016338	PUM1	90	91.566	Papio_anubis
ENSAOCG00000003944	pum1	100	92.530	ENSPKIG00000010578	pum1	100	76.853	Paramormyrops_kingsleyae
ENSAOCG00000003944	pum1	100	91.807	ENSPSIG00000014118	PUM1	90	91.807	Pelodiscus_sinensis
ENSAOCG00000003944	pum1	79	99.153	ENSPMGG00000005836	pum1	100	99.153	Periophthalmus_magnuspinnatus
ENSAOCG00000003944	pum1	100	77.413	ENSPEMG00000010009	Pum1	100	83.292	Peromyscus_maniculatus_bairdii
ENSAOCG00000003944	pum1	100	91.325	ENSPCIG00000014151	PUM1	100	81.088	Phascolarctos_cinereus
ENSAOCG00000003944	pum1	100	98.072	ENSPFOG00000007289	pum1	99	97.994	Poecilia_formosa
ENSAOCG00000003944	pum1	100	98.072	ENSPLAG00000007256	pum1	100	97.989	Poecilia_latipinna
ENSAOCG00000003944	pum1	100	98.072	ENSPMEG00000019543	pum1	99	97.479	Poecilia_mexicana
ENSAOCG00000003944	pum1	100	98.108	ENSPREG00000005195	pum1	100	98.305	Poecilia_reticulata
ENSAOCG00000003944	pum1	100	77.606	ENSPPYG00000001621	PUM1	90	88.506	Pongo_abelii
ENSAOCG00000003944	pum1	81	92.901	ENSPCAG00000001979	PUM1	73	93.519	Procavia_capensis
ENSAOCG00000003944	pum1	100	79.079	ENSPCOG00000004398	PUM1	90	91.325	Propithecus_coquereli
ENSAOCG00000003944	pum1	100	85.301	ENSPVAG00000005207	PUM1	87	85.783	Pteropus_vampyrus
ENSAOCG00000003944	pum1	100	99.226	ENSPNYG00000009518	pum1	100	99.226	Pundamilia_nyererei
ENSAOCG00000003944	pum1	100	82.881	ENSPNAG00000026728	pum1	100	82.773	Pygocentrus_nattereri
ENSAOCG00000003944	pum1	100	77.907	ENSRNOG00000011709	Pum1	90	91.768	Rattus_norvegicus
ENSAOCG00000003944	pum1	94	91.566	ENSRBIG00000042521	PUM1	90	91.566	Rhinopithecus_bieti
ENSAOCG00000003944	pum1	100	91.084	ENSRROG00000020156	PUM1	90	92.010	Rhinopithecus_roxellana
ENSAOCG00000003944	pum1	100	91.084	ENSSBOG00000032037	PUM1	90	91.566	Saimiri_boliviensis_boliviensis
ENSAOCG00000003944	pum1	100	91.325	ENSSHAG00000010918	PUM1	85	91.084	Sarcophilus_harrisii
ENSAOCG00000003944	pum1	100	97.592	ENSSMAG00000010918	pum1	100	99.518	Scophthalmus_maximus
ENSAOCG00000003944	pum1	100	99.518	ENSSDUG00000009021	pum1	100	99.398	Seriola_dumerili
ENSAOCG00000003944	pum1	94	99.365	ENSSLDG00000009667	pum1	100	99.365	Seriola_lalandi_dorsalis
ENSAOCG00000003944	pum1	92	85.577	ENSSARG00000003055	PUM1	78	91.566	Sorex_araneus
ENSAOCG00000003944	pum1	100	91.566	ENSSPUG00000006267	PUM1	90	91.566	Sphenodon_punctatus
ENSAOCG00000003944	pum1	100	99.914	ENSSPAG00000016636	pum1	100	99.914	Stegastes_partitus
ENSAOCG00000003944	pum1	100	91.525	ENSSSCG00000003591	PUM1	95	89.537	Sus_scrofa
ENSAOCG00000003944	pum1	100	98.022	ENSTRUG00000013121	pum1	100	98.750	Takifugu_rubripes
ENSAOCG00000003944	pum1	100	97.009	ENSTNIG00000016983	pum1	99	97.009	Tetraodon_nigroviridis
ENSAOCG00000003944	pum1	87	90.244	ENSTBEG00000013810	PUM1	89	90.244	Tupaia_belangeri
ENSAOCG00000003944	pum1	100	77.220	ENSTTRG00000007436	PUM1	87	91.084	Tursiops_truncatus
ENSAOCG00000003944	pum1	98	90.615	ENSUAMG00000018262	-	100	72.554	Ursus_americanus
ENSAOCG00000003944	pum1	100	79.200	ENSUMAG00000009211	PUM1	89	76.453	Ursus_maritimus
ENSAOCG00000003944	pum1	92	83.951	ENSVPAG00000005902	PUM1	92	81.807	Vicugna_pacos
ENSAOCG00000003944	pum1	100	91.525	ENSVVUG00000014631	PUM1	90	91.566	Vulpes_vulpes
ENSAOCG00000003944	pum1	100	73.328	ENSXETG00000012904	pum1	99	71.547	Xenopus_tropicalis
ENSAOCG00000003944	pum1	100	98.022	ENSXMAG00000002945	pum1	100	98.095	Xiphophorus_maculatus