EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000004083 (Gene tree)
Gene ID: 111577198
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: vigilin-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 29170 bases
Position: chrNXFZ01003218.1:143747-172916
Accession: 111577198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000020170	KH_1	PF00013.29	4.6e-189	1	14
ENSAOCP00000020170	KH_1	PF00013.29	4.6e-189	2	14
ENSAOCP00000020170	KH_1	PF00013.29	4.6e-189	3	14
ENSAOCP00000020170	KH_1	PF00013.29	4.6e-189	4	14
ENSAOCP00000020170	KH_1	PF00013.29	4.6e-189	5	14
ENSAOCP00000020170	KH_1	PF00013.29	4.6e-189	6	14
ENSAOCP00000020170	KH_1	PF00013.29	4.6e-189	7	14
ENSAOCP00000020170	KH_1	PF00013.29	4.6e-189	8	14
ENSAOCP00000020170	KH_1	PF00013.29	4.6e-189	9	14
ENSAOCP00000020170	KH_1	PF00013.29	4.6e-189	10	14
ENSAOCP00000020170	KH_1	PF00013.29	4.6e-189	11	14
ENSAOCP00000020170	KH_1	PF00013.29	4.6e-189	12	14
ENSAOCP00000020170	KH_1	PF00013.29	4.6e-189	13	14
ENSAOCP00000020170	KH_1	PF00013.29	4.6e-189	14	14
ENSAOCP00000001119	KH_1	PF00013.29	1.4e-188	1	14
ENSAOCP00000001119	KH_1	PF00013.29	1.4e-188	2	14
ENSAOCP00000001119	KH_1	PF00013.29	1.4e-188	3	14
ENSAOCP00000001119	KH_1	PF00013.29	1.4e-188	4	14
ENSAOCP00000001119	KH_1	PF00013.29	1.4e-188	5	14
ENSAOCP00000001119	KH_1	PF00013.29	1.4e-188	6	14
ENSAOCP00000001119	KH_1	PF00013.29	1.4e-188	7	14
ENSAOCP00000001119	KH_1	PF00013.29	1.4e-188	8	14
ENSAOCP00000001119	KH_1	PF00013.29	1.4e-188	9	14
ENSAOCP00000001119	KH_1	PF00013.29	1.4e-188	10	14
ENSAOCP00000001119	KH_1	PF00013.29	1.4e-188	11	14
ENSAOCP00000001119	KH_1	PF00013.29	1.4e-188	12	14
ENSAOCP00000001119	KH_1	PF00013.29	1.4e-188	13	14
ENSAOCP00000001119	KH_1	PF00013.29	1.4e-188	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000013772	-	3747	-	ENSAOCP00000001119	1248 (aa)	-	-
ENSAOCT00000013752	-	7438	XM_023283338	ENSAOCP00000020170	1268 (aa)	XP_023139106	UPI000C30BE4E

Gene Model

Click here to download ENSAOCG00000004083's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000004083's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000004083	hdlbpb	100	72.100	ENSAOCG00000000300	hdlbpa	100	72.100

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000004083	hdlbpb	100	99.290	ENSAPOG00000006904	hdlbpb	100	99.290	Acanthochromis_polyacanthus
ENSAOCG00000004083	hdlbpb	100	92.637	ENSACIG00000016154	hdlbpb	100	92.637	Amphilophus_citrinellus
ENSAOCG00000004083	hdlbpb	100	99.921	ENSAPEG00000012270	hdlbpb	100	99.921	Amphiprion_percula
ENSAOCG00000004083	hdlbpb	100	97.476	ENSATEG00000019877	hdlbpb	100	97.476	Anabas_testudineus
ENSAOCG00000004083	hdlbpb	100	82.698	ENSACAG00000003606	-	100	82.698	Anolis_carolinensis
ENSAOCG00000004083	hdlbpb	100	97.950	ENSACLG00000006618	hdlbpb	100	97.950	Astatotilapia_calliptera
ENSAOCG00000004083	hdlbpb	100	78.346	ENSAMXG00000019946	hdlbpb	100	78.346	Astyanax_mexicanus
ENSAOCG00000004083	hdlbpb	100	96.688	ENSCSEG00000000955	hdlbpb	100	96.688	Cynoglossus_semilaevis
ENSAOCG00000004083	hdlbpb	100	96.215	ENSCVAG00000005345	hdlbpb	100	96.215	Cyprinodon_variegatus
ENSAOCG00000004083	hdlbpb	99	85.951	ENSDARG00000061864	hdlbpb	99	85.951	Danio_rerio
ENSAOCG00000004083	hdlbpb	94	70.402	ENSEBUG00000005304	hdlbpb	96	70.402	Eptatretus_burgeri
ENSAOCG00000004083	hdlbpb	100	78.807	ENSELUG00000019925	hdlbpb	100	78.964	Esox_lucius
ENSAOCG00000004083	hdlbpb	88	34.404	ENSFHEG00000001701	hdlbpb	100	91.325	Fundulus_heteroclitus
ENSAOCG00000004083	hdlbpb	96	88.712	ENSGMOG00000004522	hdlbpb	78	88.712	Gadus_morhua
ENSAOCG00000004083	hdlbpb	100	96.215	ENSGAFG00000005278	hdlbpb	100	96.215	Gambusia_affinis
ENSAOCG00000004083	hdlbpb	99	93.607	ENSGACG00000019361	hdlbpb	100	93.844	Gasterosteus_aculeatus
ENSAOCG00000004083	hdlbpb	100	97.792	ENSHBUG00000018434	hdlbpb	100	97.792	Haplochromis_burtoni
ENSAOCG00000004083	hdlbpb	100	85.669	ENSIPUG00000003291	HDLBP	100	86.051	Ictalurus_punctatus
ENSAOCG00000004083	hdlbpb	100	97.397	ENSKMAG00000016562	hdlbpb	100	97.397	Kryptolebias_marmoratus
ENSAOCG00000004083	hdlbpb	100	97.792	ENSLBEG00000027855	hdlbpb	100	97.792	Labrus_bergylta
ENSAOCG00000004083	hdlbpb	100	85.189	ENSLACG00000007661	hdlbpb	90	85.189	Latimeria_chalumnae
ENSAOCG00000004083	hdlbpb	100	83.664	ENSLOCG00000013909	hdlbpb	100	83.664	Lepisosteus_oculatus
ENSAOCG00000004083	hdlbpb	100	98.107	ENSMAMG00000003035	hdlbpb	100	98.107	Mastacembelus_armatus
ENSAOCG00000004083	hdlbpb	100	97.950	ENSMZEG00005021465	hdlbpb	100	97.950	Maylandia_zebra
ENSAOCG00000004083	hdlbpb	100	96.845	ENSMMOG00000012525	hdlbpb	100	96.845	Mola_mola
ENSAOCG00000004083	hdlbpb	100	95.978	ENSMALG00000008938	hdlbpb	100	95.978	Monopterus_albus
ENSAOCG00000004083	hdlbpb	100	98.028	ENSNBRG00000002236	hdlbpb	100	98.028	Neolamprologus_brichardi
ENSAOCG00000004083	hdlbpb	100	97.634	ENSONIG00000009211	hdlbpb	100	97.634	Oreochromis_niloticus
ENSAOCG00000004083	hdlbpb	100	95.741	ENSORLG00000006581	hdlbpb	100	95.741	Oryzias_latipes
ENSAOCG00000004083	hdlbpb	100	95.899	ENSORLG00020010012	hdlbpb	100	95.899	Oryzias_latipes_hni
ENSAOCG00000004083	hdlbpb	100	96.215	ENSORLG00015006863	hdlbpb	100	96.215	Oryzias_latipes_hsok
ENSAOCG00000004083	hdlbpb	100	96.136	ENSOMEG00000011131	hdlbpb	100	96.136	Oryzias_melastigma
ENSAOCG00000004083	hdlbpb	100	89.511	ENSPKIG00000005966	hdlbpb	100	89.511	Paramormyrops_kingsleyae
ENSAOCG00000004083	hdlbpb	86	92.778	ENSPMGG00000019853	hdlbpb	99	92.778	Periophthalmus_magnuspinnatus
ENSAOCG00000004083	hdlbpb	95	74.671	ENSPMAG00000002131	hdlbpb	100	74.781	Petromyzon_marinus
ENSAOCG00000004083	hdlbpb	93	66.438	ENSPMAG00000000249	-	99	66.447	Petromyzon_marinus
ENSAOCG00000004083	hdlbpb	100	95.632	ENSPFOG00000008755	hdlbpb	100	95.632	Poecilia_formosa
ENSAOCG00000004083	hdlbpb	100	96.609	ENSPLAG00000007055	hdlbpb	100	96.609	Poecilia_latipinna
ENSAOCG00000004083	hdlbpb	100	96.530	ENSPMEG00000001952	hdlbpb	100	96.530	Poecilia_mexicana
ENSAOCG00000004083	hdlbpb	100	96.688	ENSPREG00000012848	hdlbpb	100	96.688	Poecilia_reticulata
ENSAOCG00000004083	hdlbpb	100	97.792	ENSPNYG00000022467	hdlbpb	100	97.792	Pundamilia_nyererei
ENSAOCG00000004083	hdlbpb	100	88.328	ENSPNAG00000011104	hdlbpb	100	88.328	Pygocentrus_nattereri
ENSAOCG00000004083	hdlbpb	100	88.644	ENSSFOG00015023199	hdlbpb	100	88.644	Scleropages_formosus
ENSAOCG00000004083	hdlbpb	100	97.634	ENSSMAG00000008790	hdlbpb	100	97.634	Scophthalmus_maximus
ENSAOCG00000004083	hdlbpb	100	98.896	ENSSDUG00000020694	hdlbpb	100	98.896	Seriola_dumerili
ENSAOCG00000004083	hdlbpb	100	98.344	ENSSLDG00000020807	hdlbpb	100	98.344	Seriola_lalandi_dorsalis
ENSAOCG00000004083	hdlbpb	100	83.202	ENSSPUG00000018688	-	100	83.202	Sphenodon_punctatus
ENSAOCG00000004083	hdlbpb	100	99.527	ENSSPAG00000016969	hdlbpb	100	99.527	Stegastes_partitus
ENSAOCG00000004083	hdlbpb	98	93.428	ENSTRUG00000012888	hdlbpb	99	93.428	Takifugu_rubripes
ENSAOCG00000004083	hdlbpb	99	94.675	ENSTNIG00000002555	hdlbpb	100	94.675	Tetraodon_nigroviridis
ENSAOCG00000004083	hdlbpb	100	84.229	ENSXCOG00000001797	hdlbpb	100	68.722	Xiphophorus_couchianus
ENSAOCG00000004083	hdlbpb	100	95.820	ENSXMAG00000015633	hdlbpb	100	95.820	Xiphophorus_maculatus